Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Sto8g1094 ATGCAAAGCGATGTAGAGGTAAAACGAGGGATTCACACCTATGTTGCTCAGTGGCCAGTATATGCACTAGCATGGTCAATCCGTGGCGACAAATATCCTCGCCTTGCCATTGGTAGTTTCATAGAAGACTACACGAACAAGATAGAACTAGTTCACTTCAACCATGACACATTCAATTTCACCACAGACCCTCATTTGGTATTTGACCACCCTTATGCACCAACGAACATCATGTTCTTCCCTTCCGAGGACAACACAAATCCTGACATCATTGCCACCTCTGGGGACTACCTAAGACTCTGGGAAATTCACGGTGATCGGATACAACTCAAGTCCCTCCTGAATGGTAACAAAGTTAGAGATAACTCAACCATAACTTCCTTCGATTGGGCTGAGTTTGACACCCGTCGAGTGGCCACTTCAAGTGTAGACACTACGTGTACCATATGGGATATAGAGAGGGAGGCTTTGGACACACAATTAGTTGCACATGACAAAGAAGTGTATGACATATCATGGGGTGGTTTTAATGTATTTGCTTCAGTGTCTGGGGATGGTTCTGTAAGGGTTTTTGATTTGAGGGACAAAGAAAAATCAACAATAATATATGAAAACCCAGTGCAAGATTGCCCTTTGCTACGTTTAGAATGGAATAAAGGAGATCCAAGGTTTTTGGCTACGGTTGGAATGGACAGTAATAAAGTGGTAATAATGGATATTAGGCTACCAACCACACCTCTGATGGAATTGAATAAGCATAAGGGAAGTGTTAATGCTATATCGTGGTCCCCACATATCGGACGACAGCTGTGCTCTTGCGGTGATGATTCAAGGGCTTTGATTTGGGAGGTGGTGGAAACAGGGCATCAACCAAGGGATGGGGGTAATGATGTGAAGCCTGAGATGTGGTATGAATCAACGGCTGAGATCAATCAAGTGCGTTGGTCTCCTATTCAGATGGATTGGGTTGCCCTTGGTTTCCTCAATATGTTACAGCTTTTGAAGGTGTAG 1011 0.4392 MQSDVEVKRGIHTYVAQWPVYALAWSIRGDKYPRLAIGSFIEDYTNKIELVHFNHDTFNFTTDPHLVFDHPYAPTNIMFFPSEDNTNPDIIATSGDYLRLWEIHGDRIQLKSLLNGNKVRDNSTITSFDWAEFDTRRVATSSVDTTCTIWDIEREALDTQLVAHDKEVYDISWGGFNVFASVSGDGSVRVFDLRDKEKSTIIYENPVQDCPLLRLEWNKGDPRFLATVGMDSNKVVIMDIRLPTTPLMELNKHKGSVNAISWSPHIGRQLCSCGDDSRALIWEVVETGHQPRDGGNDVKPEMWYESTAEINQVRWSPIQMDWVALGFLNMLQLLKV 336
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Sto8g1094 336 SMART WD40_4 61 102 IPR001680 GO:0005515
Sto8g1094 336 SMART WD40_4 107 151 IPR001680 GO:0005515
Sto8g1094 336 SMART WD40_4 198 239 IPR001680 GO:0005515
Sto8g1094 336 SMART WD40_4 243 283 IPR001680 GO:0005515
Sto8g1094 336 SMART WD40_4 154 192 IPR001680 GO:0005515
Sto8g1094 336 PANTHER WD REPEAT CONTAINING PROTEIN 1 336 IPR045159 -
Sto8g1094 336 Pfam WD domain, G-beta repeat 161 192 IPR001680 GO:0005515
Sto8g1094 336 ProSiteProfiles Trp-Asp (WD) repeats circular profile. 250 284 - -
Sto8g1094 336 ProSiteProfiles Trp-Asp (WD) repeats profile. 250 284 IPR001680 GO:0005515
Sto8g1094 336 ProSitePatterns Trp-Asp (WD) repeats signature. 270 284 IPR019775 -
Sto8g1094 336 PANTHER WD REPEAT-CONTAINING PROTEIN LWD1-LIKE 1 336 - -
Sto8g1094 336 SUPERFAMILY WD40 repeat-like 19 327 IPR036322 GO:0005515
Sto8g1094 336 Gene3D - 10 329 IPR015943 GO:0005515
Sto8g1094 336 ProSiteProfiles Trp-Asp (WD) repeats profile. 161 201 IPR001680 GO:0005515
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Sto8g1094 Sto-Chr8 6871349 6872359 Dispersed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Sto8g1094 K11805 - qsu:111996771 557.37
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Sto8g1094 8 6871349 6872359 Sto8g1094 8 6871349 6872359 ECH