Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Sto8g1086 ATGTATTATAATGGATACTACCACCTATTCTATCAATACAACCCCAAAGGAGCAGTGTGGGGTAACATTGTGTGGGCCCACTCTGTTTCAAAGGACCTTATCAATTGGAAAGCTCTTGAACATGCCATTTACCCCTCCAAACCGTTTGACAAATTCGGGTGTTGGTCCGGGTCGATCACCATCGTCCCGGGTAAAGGACCCATAATTCTCTACACAGGAATCATTGACGAACAAAACACACAAGTACAAGTCTATGCGGAACCCGAGAACATATCCGACCCGTTTCTCACGAGATGGGTAAAACCCGATGCAATCAACCCGGTAGTGGTGGCGGACGCGGGCGTGAACCAGACAGCATTCCGTGACCCGACAACTGCGTGGTGGAGTGAGGGGGACAAGCACTGGAGGATGTTGGTTGGAAGCAGGAGGAAGAGGAGAGGAGTAGCACATTTGTATAGGTCCAAGGACTTTGTGAGATGGGTCAAGGCCAAACACCCGATCCATTCGAAAGAGTTTACGGGTATGTGGGAATGCCCGGACTTCTACCCGGTTAGCGTGAATGGGAATCAAGGGTTGGACACGTCAGAGGTAGGGAATCACGTGAAGCACGTGCTGAAGAATAGCCTAGACGACACAAGGTATGACTATTACACGATTGGGACATATAACCAGGCCAAGGATAGGTATATCCCGGATAACACGTCCGAGGATGGTTGGGGTGGACTCAGATATGATTATGGTAATTTCTATGCTTCCAAGACCTTTTTTGATGACAGTAAGAATCGAAGGGTCTTGTGGGGTTGGGCCAACGAGTCTGATGCTAAGCAGGATGATGTTTCTAAAGGATGGGCCGGAATTCAGgCAATCCCAAGAAGTGTGTGGCTTGATTCAAATGGGAGACAATTGGTTCAATGGCCTGTTGAAGAATTAAATGCTCTTAGAGGGGAAGAAGTTAAGCTGAGCAATCAAGTGCTTGAGAAGGGACAACTCCATGAAGTAAAAGGAATCACAGCAGCCCAGGCTGATGTGGAAGTTACATTCACATTCCCAAGCTTGGAGAGGGCAGAACCATTCAATCCCAGGTGGGTGAAACCACAGGATATTTGTGCAGAAAAGGGGTCAAAGATTGTAGGTGGGGTTGGACCATTTGGGCTTCTGGCATTGGCTTCTGAGAAGCTAGAAGAGTTCACTCCTGTCTTCTTCAGGATTTTCAAAGCGCCAAACAAGCACGTAGTTCTCCTCTGCTCTGATGCATCAAGCTCCTCTTCCAACAAGACAAACTTGTACATGCCATCATTTGGTGGCTTTGTAGATGTAGATTTAGCAGATAAGAAGCTTTCTCTTAGGAGTCTGATAGATCACTCTGTAGTGGAAAGTTTTGGAGAAGGAGGTAGGACAAACATACTGTCTAGGGTTTATCCAAGGAAGGCAATAATGACCGCAGCTCACTTGTTTGTCTTCAACAACGGTACTGAGCCAATTACTGTGGAGAATCTCAGTGCGTGGAGTATGAGAGCTGCTCAAatcaattaa 1533 0.4684 MYYNGYYHLFYQYNPKGAVWGNIVWAHSVSKDLINWKALEHAIYPSKPFDKFGCWSGSITIVPGKGPIILYTGIIDEQNTQVQVYAEPENISDPFLTRWVKPDAINPVVVADAGVNQTAFRDPTTAWWSEGDKHWRMLVGSRRKRRGVAHLYRSKDFVRWVKAKHPIHSKEFTGMWECPDFYPVSVNGNQGLDTSEVGNHVKHVLKNSLDDTRYDYYTIGTYNQAKDRYIPDNTSEDGWGGLRYDYGNFYASKTFFDDSKNRRVLWGWANESDAKQDDVSKGWAGIQAIPRSVWLDSNGRQLVQWPVEELNALRGEEVKLSNQVLEKGQLHEVKGITAAQADVEVTFTFPSLERAEPFNPRWVKPQDICAEKGSKIVGGVGPFGLLALASEKLEEFTPVFFRIFKAPNKHVVLLCSDASSSSSNKTNLYMPSFGGFVDVDLADKKLSLRSLIDHSVVESFGEGGRTNILSRVYPRKAIMTAAHLFVFNNGTEPITVENLSAWSMRAAQIN 510
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Sto8g1086 510 SMART glyco_32 1 464 IPR001362 GO:0004553|GO:0005975
Sto8g1086 510 CDD GH32_Fruct1-like 1 295 - -
Sto8g1086 510 Gene3D - 320 504 - -
Sto8g1086 510 PANTHER BETA-FRUCTOFURANOSIDASE, INSOLUBLE PROTEIN 1 509 - -
Sto8g1086 510 Pfam Glycosyl hydrolases family 32 C terminal 309 503 IPR013189 -
Sto8g1086 510 Pfam Glycosyl hydrolases family 32 N-terminal domain 1 306 IPR013148 -
Sto8g1086 510 PANTHER BETA-FRUCTOFURANOSIDASE, INSOLUBLE ISOENZYME CWINV1-RELATED 1 509 - -
Sto8g1086 510 SUPERFAMILY Arabinanase/levansucrase/invertase 1 307 IPR023296 -
Sto8g1086 510 SUPERFAMILY Concanavalin A-like lectins/glucanases 306 505 IPR013320 -
Sto8g1086 510 Gene3D Glycosyl hydrolase domain; family 43 1 319 IPR023296 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Sto8g1086 Sto-Chr8 6822005 6823909 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Sto8g1086 1 505 Glycoside Hydrolase AT3G52600 64.341 0.0 678
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Sto8g1086 K01193 - gmx:100777418 837.795
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Sto8g1086 8 6822005 6823909 Sto8g1086 8 6822005 6823909 ECH