Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Sto8g1072 ATGGCCGTGAAGAGGTTCCTCAAACCTATTGCAAAACCATCCCCATCCTCGTCCTCACTACCCCTTTCTCCAATCCCCAATCCTCCTCTTCCATCCCCACCCGATCATTCTCTCGCCCCACTTCCTACTCTCACTCTTTCTCCCAACTCCCACCATCATCGCCTCCTTCATTTCCTTAAGGCCCATCTCGCTCCTCCTTTTACACCACACACCCTTCTCCACTTCCTCAAATCCAAGCTCCATCACCATCCTACCTTCACATTCTATGACTTTCATATCTTCAACTGGGCCTCCACTATCGACTCCTACCGCCATGACCACTCTACTTTCGAATGGATGGCTCGTACTCTCGCTATTACTAACCGTCTTGTCGAACTCCGGGCTCTCCTTCAATTCATCGCTTCCAATCCTTGCCCCTGCTCCGACGGTATTTTCTCTTGCTCTCGAACTGAACCTATATTCCAGTTTGCGATTAACGCTTTTTGTAAAGCTCGGAAATTGGACGATGCTGTGTTTGCTTTTGAGTGTATGCGAAGGTTGATTGATGGGAGGCCTAATGTGGTCATATACAATTGTTTGATTCATGGGTTTGTGAAATGCGGAAGGCACGATAAAGCGTTGGAATTTTATGATAAAATGATTAGGGATAGAGTAAAGCCTGATGTATTTACTTTTAACATTTTGATCAGTAGTTATTGTCGAAATTCACAGTTTAGATTGGCTTTGGAGTTATTCAAGGAGATGAGGGACAGGGGGTGCAATCCAAATGTGGTTACTTTTAATACTTTGATTAAGGGGCTCTTTAGGGAGAGAAAGATTGAAGAAGGGGTTGGGATGGCCTACGAGATGATTGAATTGGGATGTCAACTCTCTAGTGTCACTTGTGAGATTTTAGTTGATGGACTTTCTAAGGAAGGGCAGATTTTGCAGGCATGTGAGATATTAGTAGACTTGTCTAACAAGAGAGTTTTACCCAATGAATACGATTATTTTGTTTTGGTGGATACTCTATGTGGGAAAGGGAATGCTGTTAGAGCGTTGGAGCTCATTTATGAACTATGGAACAAAGGAAATCCCCCAAGTTTGATTGCTTGTACTATATTGATTGATGGTTTAAGGAGCTTGAGGAGGACCGAAGAAGCACTGAGGTTGTCCCAAAAGATGCTTGAAGAGGGTATAGTTCCTGATATTGTGACTTTTAATAGTGTTCTTCAGGATATTTGCAGTGTGCAAAGAACAGAAGATGCAAATAAATTGAGATTGCTGGCTTCACGAAAGGGTTTGAAACCAGATGGCATGACATATAGAATTATGGTTTCAGGTCAGATGGAGGATGATCACTTGTTTTGCATAAAGATAATGTGCAAATTGACTTTGAAGGTGACTGAAAACCCCAATGATATTGGCGGTTGCTGTTGA 1419 0.4278 MAVKRFLKPIAKPSPSSSSLPLSPIPNPPLPSPPDHSLAPLPTLTLSPNSHHHRLLHFLKAHLAPPFTPHTLLHFLKSKLHHHPTFTFYDFHIFNWASTIDSYRHDHSTFEWMARTLAITNRLVELRALLQFIASNPCPCSDGIFSCSRTEPIFQFAINAFCKARKLDDAVFAFECMRRLIDGRPNVVIYNCLIHGFVKCGRHDKALEFYDKMIRDRVKPDVFTFNILISSYCRNSQFRLALELFKEMRDRGCNPNVVTFNTLIKGLFRERKIEEGVGMAYEMIELGCQLSSVTCEILVDGLSKEGQILQACEILVDLSNKRVLPNEYDYFVLVDTLCGKGNAVRALELIYELWNKGNPPSLIACTILIDGLRSLRRTEEALRLSQKMLEEGIVPDIVTFNSVLQDICSVQRTEDANKLRLLASRKGLKPDGMTYRIMVSGQMEDDHLFCIKIMCKLTLKVTENPNDIGGCC 472
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Sto8g1072 472 Pfam PPR repeat 158 179 IPR002885 -
Sto8g1072 472 PANTHER FERTILITY RESTORER HOMOLOGUE A-LIKE 16 443 - -
Sto8g1072 472 Gene3D Tetratricopeptide repeat domain 149 319 IPR011990 GO:0005515
Sto8g1072 472 ProSiteProfiles Pentatricopeptide (PPR) repeat profile. 221 255 IPR002885 -
Sto8g1072 472 ProSiteProfiles Pentatricopeptide (PPR) repeat profile. 291 325 IPR002885 -
Sto8g1072 472 ProSiteProfiles Pentatricopeptide (PPR) repeat profile. 256 290 IPR002885 -
Sto8g1072 472 MobiDBLite consensus disorder prediction 1 43 - -
Sto8g1072 472 PANTHER ATPASE EXPRESSION PROTEIN 3 16 443 - -
Sto8g1072 472 Gene3D Tetratricopeptide repeat domain 320 387 IPR011990 GO:0005515
Sto8g1072 472 Gene3D Tetratricopeptide repeat domain 388 449 IPR011990 GO:0005515
Sto8g1072 472 ProSiteProfiles Pentatricopeptide (PPR) repeat profile. 361 395 IPR002885 -
Sto8g1072 472 Pfam PPR repeat family 220 268 IPR002885 -
Sto8g1072 472 Pfam PPR repeat family 360 409 IPR002885 -
Sto8g1072 472 MobiDBLite consensus disorder prediction 19 38 - -
Sto8g1072 472 SUPERFAMILY HCP-like 161 390 - -
Sto8g1072 472 ProSiteProfiles Pentatricopeptide (PPR) repeat profile. 186 220 IPR002885 -
Sto8g1072 472 Pfam PPR repeat 184 213 IPR002885 -
Sto8g1072 472 TIGRFAM PPR: pentatricopeptide repeat domain 258 291 IPR002885 -
Sto8g1072 472 TIGRFAM PPR: pentatricopeptide repeat domain 188 222 IPR002885 -
Sto8g1072 472 TIGRFAM PPR: pentatricopeptide repeat domain 223 257 IPR002885 -
Sto8g1072 472 TIGRFAM PPR: pentatricopeptide repeat domain 364 397 IPR002885 -
Sto8g1072 472 ProSiteProfiles Pentatricopeptide (PPR) repeat profile. 396 430 IPR002885 -
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Sto8g1072 142 448 Miscellaneous Gene Families AT4G11690 26.059 5.07e-31 124
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Sto8g1072 - - qsu:112024248 607.446
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Sto8g1072 8 6752015 6754916 Sto8g1072 8 6752015 6754916 ECH