Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Sto8g0991 ATGGATGGATCTCGTAAATACCAGGTATCCTTGAGAGGAGCAAGTGCGAAGGAGATAACAAGGGATGCTCTTCTTGAGAAGGTATCCCGGGAAAGAGAGCTTCGCAATTATGCAAGACGAGCTACTGCTGCTGCTCTCTTCATTCAGAGAGTATGGAGGCGTTACAAGGTCACAAGGATGGTTGCACAGAAACTTCAGCAGGAGTGGGAGATATTGGTGAATCATTACACTGGTGTAATGACAGCAACATGGATTGCAAACAATTTGTTGCgaccatttcttttctttattaccTGGTTTTCAGCTGAGCATCAGAAGGTTCATAGCAAGAAAACAGACTCTATGAAGATTTGCTTTACAATTCTATTGGAAAGCCTGAACTCTTCTGACTCAAAGAGGAACTTCTGCTCTTTAGCCATTGGTATGCCTGAAGAAAGGAGAATTTGGAGTGACCAAGCACGAAGGCTGACTTCTCTTGGTTTTTTCATTCTATCGGAGTTTAGTAAAGGCAGTTCTAGGGATCAAGAAATTACTTTGGTTGCATCCCTTGCAATGCGGGTTCTTGTGATGCTAACTGATCTGAAAGGATGGAAAGGCATTACTGATGACAACCGGCAAGATGCTGATATAGCAGTGAGAGGTTTAATTGAGTATATGGGGAGTAATGCCAGTGGTAGCTATGAGTCCATTGGTAGATATATTAGTTCATTGGATTATTATTCTTCGCAAACAAAGAATATTAGCCCGACTgatgataaatttttaattactgCAAGTACAATAACTTTAGCTTTGCAGCCATTCTATCTGAGAAACTTTGATGTAAAAGGGCCTGCTATGTTGGACAAGAACCATCCTGCTAATCAGTATTTTGTATATATGCTGACAATTCCTTGTCTTGTGCAACGTCTGCCTTCTGTTCTTCGACCTGCTTTAAAACACAGATCTATTTTGTTTCCATGCTTTCTGGGTATATTGATTTTGAAAGAGAATATTTCAACGGAGATATCATATTTGGTTCATTTAGGGTCTCTTGTCTCTTCCAAGGCAATTCCACCAGTTGGTTGGGCTCTCACTAACATTATATGCCTAGCAATGGGGAATGAGAATAATTCTGTAGATCCTCAATGCTTCCATCATGGTTTAGACCATGCTTTGTATGTCCGAGTTGTCAACACTCTTTCACAAGCCCTATTGGCTTATCTTGATAATCTTGGAGGGATTAGAAAGGGGAAGAAAGTCATCCAAAATGATGTTGAAGCTTCAATAGAGCCCATGGATACTTTTCTTTATGAGAGTGAAGCAGAATATGATTCCTTAATGATTTCATACATAGATCAGTTTAGGCCTGTTTGTCAGCAGTGGCATCTTAAAAATCTTTTGGGTTCAGCAAATGGAGATGTCACTAAAAGGACGGAGACTCTGCTGCCCAATGGTCTGGAATGCTTGGGCAAGCTGGATTTATGTGACATTGCACTTTTTTATTCTAACATACTAAGAATATATTCAGTCTTGAATCCAATTCATGGCTCCTTGCCGGTTCTCAACATGCTATCCTTTACTCCTGGATTTCTTATCCAGGTGTGGCACATATTAGAGGATTCCTTTTTTCGTGGAGACAGTGATATTTCTGTTAATCACATGAATGGAAATAGCAAACATAGAGCTTCTGAGAGGGGGCCAAAACATGTCAATAGGGATGGGTCTAATAAGTGGGTCAGTGTTCTTCATAAATTAACAGGTAAGTCCCAAGCTGCAACTAATAATGCAGATCCCATTAGCAATCATCCAGAGCCTAGCCAAGTGATCGAGGATTCATCTGATATATGGGACATAGAGCCTATGAGGCATGGCCCGCAAGGCATTTCAAAAGATTTGTTTGCTCTGCTTCATATTTTTTGTGCCACCTATTCTCACCTACTTTTAGTTCTTGATGACATAGAGTTCTATGAGAAGCAGGTTCCATTTAAATTAGAGAAGCAACGAAGAATTGCATCAATGCTTAATACTCTGGTATATAATGGCTTGTCCCAAGGTATTAGTCAGCAGAATAGACCCCTCATGGACACTGCAATTAGATGCTTACATTTAATGTATGAAAGGAATTGTCGGCATCAGTTTTGTCCTCCTGAATTGTGGCTTTCACCTGCTAGAAAAAGCCGGCCTCCAATTGCGGTGGCTACCAGAATTCATGAAGCGGCATCAGTTAATCTAAGATCTGATGACTCATTGGCTGTCCCAAGTATGGGTTCTGTTATCACCACAACTCCTCATGTTTTCCCTTTTGAAGAGAGAGTTGAGATGTTTCGAGAATTTATTAAGATGGATAAAGCTTCCCGAAAAATGGCTGGGGAAATTTCTGAACCTGGTTCACGAGCAATTGAAATAGTAGTGCGTCGGGGTCATATTGTAGAAGATGGATTTCGGCAATTAAATTCTCTTGGGCCAAGGTTGAAGTCATCCATCCATGTATCTTTTGTTAGTGAATGTGGCCTTCCTGAGGCTGGCCTGGACTATGGTGGGTTATCAAAAGAATTTTTAACTGACATATCAAAAGCAGCCTTTGCCCCAGAATATGGGTTATTTTCCCAAACATCGACTTCTGACAGGCTTTTAATTCCAAATTCCTCTGCAAGATATTTGGATAATGGTCTTCAGATGATTGAGTTTCTTGGAAGAGTTGTTGGTAAAGCTCTTTATGAAGGAATATTACTTGATTATTCCTTCTCACATGTTTTTGTACAAAAGCTGTTGGGGAGATATAGCTTTCTTGATGAGTTATCAACACTTGATCCAGAGTTATACAGGAATCTTGTGTATGTCAAGCATTTTGATGGTGATGTCAAGGATCTCTCTCTAGATTTTACTGTTACTGAAGAATCATTTGGCAAATGGCATGTCGTCGAGCTTAAGTCTGGTGGCAAAGATATCTCTGTGACAAATAAGAACAAAATGCAGTATATACATGCAATGGCAGACTACAAACTTAATCAACAGATATTGCCCTTCTCAAATGCATTCTACAGAGGGTTGACTGATCTTATATCACCATCCTGGTTGAAATTATTCAATGCAAGTGAATTTAATCAGTTGCTTTCAGGTGGAAATTATGATATTGACATTGATGATTTGAAAAATAACACACGGTACACAGGTGGTTATAATGAAGGAAGCAGGACAATTAAGATCTTCTGGGAGGTGGTCAAAGACTTTGAACCCGAAGAGCGTTGTATGCTTCTTAAATTTGTCACTAGCTGTTCTCGTGCTCCATTACTTGGGTTCAAATACCTGCAGCCAACTTTTACTATCCACAAGGTATGCTCTTGA 3327 0.3953 MDGSRKYQVSLRGASAKEITRDALLEKVSRERELRNYARRATAAALFIQRVWRRYKVTRMVAQKLQQEWEILVNHYTGVMTATWIANNLLRPFLFFITWFSAEHQKVHSKKTDSMKICFTILLESLNSSDSKRNFCSLAIGMPEERRIWSDQARRLTSLGFFILSEFSKGSSRDQEITLVASLAMRVLVMLTDLKGWKGITDDNRQDADIAVRGLIEYMGSNASGSYESIGRYISSLDYYSSQTKNISPTDDKFLITASTITLALQPFYLRNFDVKGPAMLDKNHPANQYFVYMLTIPCLVQRLPSVLRPALKHRSILFPCFLGILILKENISTEISYLVHLGSLVSSKAIPPVGWALTNIICLAMGNENNSVDPQCFHHGLDHALYVRVVNTLSQALLAYLDNLGGIRKGKKVIQNDVEASIEPMDTFLYESEAEYDSLMISYIDQFRPVCQQWHLKNLLGSANGDVTKRTETLLPNGLECLGKLDLCDIALFYSNILRIYSVLNPIHGSLPVLNMLSFTPGFLIQVWHILEDSFFRGDSDISVNHMNGNSKHRASERGPKHVNRDGSNKWVSVLHKLTGKSQAATNNADPISNHPEPSQVIEDSSDIWDIEPMRHGPQGISKDLFALLHIFCATYSHLLLVLDDIEFYEKQVPFKLEKQRRIASMLNTLVYNGLSQGISQQNRPLMDTAIRCLHLMYERNCRHQFCPPELWLSPARKSRPPIAVATRIHEAASVNLRSDDSLAVPSMGSVITTTPHVFPFEERVEMFREFIKMDKASRKMAGEISEPGSRAIEIVVRRGHIVEDGFRQLNSLGPRLKSSIHVSFVSECGLPEAGLDYGGLSKEFLTDISKAAFAPEYGLFSQTSTSDRLLIPNSSARYLDNGLQMIEFLGRVVGKALYEGILLDYSFSHVFVQKLLGRYSFLDELSTLDPELYRNLVYVKHFDGDVKDLSLDFTVTEESFGKWHVVELKSGGKDISVTNKNKMQYIHAMADYKLNQQILPFSNAFYRGLTDLISPSWLKLFNASEFNQLLSGGNYDIDIDDLKNNTRYTGGYNEGSRTIKIFWEVVKDFEPEERCMLLKFVTSCSRAPLLGFKYLQPTFTIHKVCS 1108
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Sto8g0991 1108 PANTHER UBIQUITIN-PROTEIN LIGASE E3C 4 1106 IPR044611 GO:0000209|GO:0061630
Sto8g0991 1108 PANTHER UBIQUITIN-PROTEIN LIGASE E3C 4 1106 - -
Sto8g0991 1108 SUPERFAMILY Hect, E3 ligase catalytic domain 794 1105 IPR035983 GO:0004842
Sto8g0991 1108 Pfam HECT-domain (ubiquitin-transferase) 849 1106 IPR000569 GO:0004842
Sto8g0991 1108 SMART hect_3 812 1108 IPR000569 GO:0004842
Sto8g0991 1108 ProSiteProfiles HECT domain profile. 818 1108 IPR000569 GO:0004842
Sto8g0991 1108 CDD HECTc 794 1106 IPR000569 GO:0004842
Sto8g0991 1108 Gene3D Hect, E3 ligase catalytic domain 920 999 - -
Sto8g0991 1108 Gene3D Hect, E3 ligase catalytic domain 1037 1108 - -
Sto8g0991 1108 Gene3D Hect, E3 ligase catalytic domains 796 1034 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Sto8g0991 Sto-Chr8 6224363 6231754 Dispersed/Transposed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Sto8g0991 K10588 - gmx:100527169 1715.28
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Sto8g0991 8 6224363 6231754 Sto8g0991 8 6224363 6231754 ECH