Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Sto8g0850 ATGAGTTCTTTGGATACGGTGAAAGTGTTCGATTTGAAAGGAAATGGGATTCCAATTTCTGACTTGTGGAAAGATAGGAAAGCCGTTGTGGCATTTGCTCGCCATTTTGGGTGTGTGCTTTGCCGCAAAAGAGCTGATTATCTTGCCTCCAAGAAGGATATAATGGATGCAGCTGGTGTAACACTTGTATTAATTGGACCTGGGAGCGTTGAACAGGCCAAAACCTTTGCTGAGCAAACAAAATTTCAAGGAGACCCCACTCACTCGTCATATGAGGCCCTTAAATTTGTTTCTGGGGTTTTAACCACATTTACCCCCAATGCCGGTCTTAAAATAATACAGTTATACATGGAAGGTTATCGACAAGattggaagctttcatttgaAAAGGATACTGTTACCAGAGGAGGCTGGAAACAAGGAGGAATTATAGTTGCAGGTCCTGGTAAAAATAACGTTTCATACATTCACAAGTTAGCCCTCAATCAAATAGAGAATCCTTGGCATATCTCACATTATGTAGACAAGGGTTTTCACGGTTCTCTGACATCTTTGTATGGATGTGTGAATAGCAGCACTGTGGTCGCTATGGCGGACAAGAAAAAGCGGCGTCGTGTGGAAGACGACGGAGCACAACTTCCCTTCAAGAATCAGCTGAAAGCCGACTCAGCTATCCTCCAAATCCTCAAAGACTTGTGCAATTCTTCCTCCTCTGCTTCGTCTACCTCCTCCACAGCCCTAACCCTCCAAGATCTCTCTCTTCCCTTCTCTTGCCGCGAGGTCACCGACCTATCTCTTTCCTCTGTACAATCCTCAATTGAATCCCTCGCCCTCAGCATCGCTAGATCCATCCTTTCCGGCCAAGGCTTCTCCTTCGACGTTCCTTCTCGCTCCGCCGCTAACCAACTCTACGTGCCGGAGCTCGACCGCATAGTCCTTAAAGACAAAACTGCTCTCCGTCCCTTTGCCAACATATCCACTGTTCGCAAATCCACCGTCACTACTCGCATCCTTCAACTCATCCATCAATTGTGCCTCAAGAACATCCATGTCACCAAGCGAGACCTCTTCTACACCGATGTCAAGCTCTTCCAGGACCAGACTCAGTCTGATGCTGTGCTCGACGATGTCTCCTGCATGCTGGGTTGCACCCGTTCTAGTCTCAATGTGGTTGCCGCCGAGAAAGGAGTTGTTGTTGGACGCCTTATTTTCAGTGACAATGGGGATATGATTGATTGTACGAAAATGGGTATGGGCGGAAAAGCTATCCCTCCCAATATTGATAGAGTAGGGGATATGCAGAGTGATGCTTTGTTTATCCTCTTGGTTGAGAAGGATGCAGCGTATATGAGATTGGCTGAGGATAGATTTTACAATCGATTCCCATGTATAATTGTGACAGCAAAGGGGCAGCCTGACGTTGCCACGAGGCTTTTCTtaaggaagatgaagatggagtTGAAGCTACCAGTGCTTGCGCTTGTGGATAGTGATCCTTACGGGTTGAAAATTCTGTCAGTTTATGGCTGTGGATCCAAGAATATGTCTTATGATAGTGCGAATTTGACGACCCCTGATATAAAGTGGCTGGGGGTTAGGCCAAGCGATCTAGACAAGTACAAGATACCTGAACAGTGTAGGTTGCCGATGACAGAGCAGGATATTAAGACTGGGAAGGACTTGCTGGAGGAAGATTTTGTTAAGAAGAATCCTGGTTGGGTTGAGGAACTGACATTGATGGTGAAAACTAAGCAGAAGGCTGAAATACAGGCTTTGAGCACTTTTGGTTTTCAGTATCTCTCTGAAGTTTATTTGCCGCTGAAGTTGCAGCAGAAGGATTGGCTCTGA 1848 0.4524 MSSLDTVKVFDLKGNGIPISDLWKDRKAVVAFARHFGCVLCRKRADYLASKKDIMDAAGVTLVLIGPGSVEQAKTFAEQTKFQGDPTHSSYEALKFVSGVLTTFTPNAGLKIIQLYMEGYRQDWKLSFEKDTVTRGGWKQGGIIVAGPGKNNVSYIHKLALNQIENPWHISHYVDKGFHGSLTSLYGCVNSSTVVAMADKKKRRRVEDDGAQLPFKNQLKADSAILQILKDLCNSSSSASSTSSTALTLQDLSLPFSCREVTDLSLSSVQSSIESLALSIARSILSGQGFSFDVPSRSAANQLYVPELDRIVLKDKTALRPFANISTVRKSTVTTRILQLIHQLCLKNIHVTKRDLFYTDVKLFQDQTQSDAVLDDVSCMLGCTRSSLNVVAAEKGVVVGRLIFSDNGDMIDCTKMGMGGKAIPPNIDRVGDMQSDALFILLVEKDAAYMRLAEDRFYNRFPCIIVTAKGQPDVATRLFLRKMKMELKLPVLALVDSDPYGLKILSVYGCGSKNMSYDSANLTTPDIKWLGVRPSDLDKYKIPEQCRLPMTEQDIKTGKDLLEEDFVKKNPGWVEELTLMVKTKQKAEIQALSTFGFQYLSEVYLPLKLQQKDWL 615
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Sto8g0850 615 PRINTS DNA topoisomerase VI subunit A (TOP6A) signature 295 315 IPR004085 GO:0003677|GO:0003918|GO:0005694|GO:0006265
Sto8g0850 615 PRINTS DNA topoisomerase VI subunit A (TOP6A) signature 361 378 IPR004085 GO:0003677|GO:0003918|GO:0005694|GO:0006265
Sto8g0850 615 PRINTS DNA topoisomerase VI subunit A (TOP6A) signature 414 432 IPR004085 GO:0003677|GO:0003918|GO:0005694|GO:0006265
Sto8g0850 615 PRINTS DNA topoisomerase VI subunit A (TOP6A) signature 470 490 IPR004085 GO:0003677|GO:0003918|GO:0005694|GO:0006265
Sto8g0850 615 PRINTS DNA topoisomerase VI subunit A (TOP6A) signature 586 609 IPR004085 GO:0003677|GO:0003918|GO:0005694|GO:0006265
Sto8g0850 615 PRINTS DNA topoisomerase VI subunit A family signature 353 364 IPR002815 GO:0003677|GO:0003918|GO:0005694
Sto8g0850 615 PRINTS DNA topoisomerase VI subunit A family signature 367 384 IPR002815 GO:0003677|GO:0003918|GO:0005694
Sto8g0850 615 PRINTS DNA topoisomerase VI subunit A family signature 385 400 IPR002815 GO:0003677|GO:0003918|GO:0005694
Sto8g0850 615 PRINTS DNA topoisomerase VI subunit A family signature 440 457 IPR002815 GO:0003677|GO:0003918|GO:0005694
Sto8g0850 615 PRINTS DNA topoisomerase VI subunit A family signature 464 485 IPR002815 GO:0003677|GO:0003918|GO:0005694
Sto8g0850 615 PRINTS DNA topoisomerase VI subunit A family signature 496 512 IPR002815 GO:0003677|GO:0003918|GO:0005694
Sto8g0850 615 CDD PRX_like2 4 158 - -
Sto8g0850 615 SUPERFAMILY DNA topoisomerase IV, alpha subunit 329 615 IPR036078 GO:0003677|GO:0005694
Sto8g0850 615 Gene3D - 394 615 - -
Sto8g0850 615 Pfam AhpC/TSA antioxidant enzyme 48 158 IPR032801 -
Sto8g0850 615 SUPERFAMILY Thioredoxin-like 9 89 IPR036249 -
Sto8g0850 615 Pfam Type IIB DNA topoisomerase 329 390 IPR013049 GO:0003677|GO:0003824|GO:0005524|GO:0005694|GO:0006259
Sto8g0850 615 CDD TOPRIM_TopoIIB_SPO 439 599 IPR034136 -
Sto8g0850 615 Gene3D Glutaredoxin 4 120 - -
Sto8g0850 615 PANTHER MEIOTIC RECOMBINATION PROTEIN SPO11 242 615 IPR002815 GO:0003677|GO:0003918|GO:0005694
Sto8g0850 615 Gene3D - 257 393 IPR036388 -
Sto8g0850 615 PANTHER DNA TOPOISOMERASE 6 SUBUNIT A 242 615 - -
Sto8g0850 615 Hamap Type 2 DNA topoisomerase 6 subunit A [top6A]. 263 615 IPR004085 GO:0003677|GO:0003918|GO:0005694|GO:0006265
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Sto8g0850 Sto-Chr8 5372356 5377107 Dispersed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Sto8g0850 K10878 - zju:107432915 969.533