Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Sto8g0837 ATGCCTCGTTATGATGATAAATACGGCAATACCCGTCTCTTTGTTGGTCATCTATCTTCGAGGACACGTTCTCGTGATCTGGAGCGACTCTTTAGCAGATATGGGAGAATTCGAGATGTAGATATGAAGCATGATTTCGCCTTTGTTGAATTTAGTGATCCCCGAGATGCTGATGATGCAAGATATAATTTGGATCGCCGTGAGGTGGATGGAAGTCGTATAACTGTTGAATTTGCAAAAGGGgttcCACGCGGTTCACGGGAATACTTGGGCAGAGGTCCTACTCCAGGATCTGGGCGCTGCTTTAACTGTGGCATTGATGGCCACTGGGCTCGAGACTGCAAAGCTGGAGACTGGAAGAACAAATGTTACCGCTGTGGGGAAAGAGGTCATATAGAACGAAACTGCAAGAATAGTCCTAAGAAAATTAGCTTGATTTGTTCTTGTAGTGGTCGCAGTTATTCACGATCACCAGTCAGGTCCCGTTCTCCTCACCGTGGCAGAAGCCGTGATCGAAGTTACAGCCGAGATCGCAGCCACAGCCGATCAAGATCCCCTGTCCGAAGAGAACGAAGTCCCATTCATAAAGATAGATCAGAATCTCCCCGTGACACAAGTCCAGAACCCAAAAGTAGTCCTCCATCGTCCAAGAGAAGGAATGACAGTCCAGCACTTGACGAAGGCAGTccagagaagagaggagacggATCACCTAAGAACGGCAATGGTAGGCAAGATGGGTCTGACTACAGTGACGGCCCTAATACAAGAAAGAGTAGAAGTAAAAGCCCCGTTAGCCCAAAAACTAATGGCGGCCACATTGCTAGCCCAAGGGATGATAGGAGCCCCATTGACGACGACGATGAAACTCGTCATTCTCCAAGGGGCAGCGAATCACCTTAA 903 0.4684 MPRYDDKYGNTRLFVGHLSSRTRSRDLERLFSRYGRIRDVDMKHDFAFVEFSDPRDADDARYNLDRREVDGSRITVEFAKGVPRGSREYLGRGPTPGSGRCFNCGIDGHWARDCKAGDWKNKCYRCGERGHIERNCKNSPKKISLICSCSGRSYSRSPVRSRSPHRGRSRDRSYSRDRSHSRSRSPVRRERSPIHKDRSESPRDTSPEPKSSPPSSKRRNDSPALDEGSPEKRGDGSPKNGNGRQDGSDYSDGPNTRKSRSKSPVSPKTNGGHIASPRDDRSPIDDDDETRHSPRGSESP 300
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Sto8g0837 300 Pfam RNA recognition motif. (a.k.a. RRM, RBD, or RNP domain) 13 74 IPR000504 GO:0003723
Sto8g0837 300 SMART c2hcfinal6 100 116 IPR001878 GO:0003676|GO:0008270
Sto8g0837 300 SMART c2hcfinal6 122 138 IPR001878 GO:0003676|GO:0008270
Sto8g0837 300 ProSiteProfiles Eukaryotic RNA Recognition Motif (RRM) profile. 11 81 IPR000504 GO:0003723
Sto8g0837 300 Gene3D - 85 144 - -
Sto8g0837 300 ProSiteProfiles Zinc finger CCHC-type profile. 100 115 IPR001878 GO:0003676|GO:0008270
Sto8g0837 300 SMART rrm1_1 12 77 IPR000504 GO:0003723
Sto8g0837 300 Pfam Zinc knuckle 121 138 IPR001878 GO:0003676|GO:0008270
Sto8g0837 300 Pfam Zinc knuckle 100 115 IPR001878 GO:0003676|GO:0008270
Sto8g0837 300 MobiDBLite consensus disorder prediction 151 300 - -
Sto8g0837 300 MobiDBLite consensus disorder prediction 274 300 - -
Sto8g0837 300 PANTHER SERINE/ARGININE-RICH SPLICING FACTOR RS2Z33 6 282 - -
Sto8g0837 300 ProSiteProfiles Zinc finger CCHC-type profile. 122 138 IPR001878 GO:0003676|GO:0008270
Sto8g0837 300 SUPERFAMILY Retrovirus zinc finger-like domains 92 139 IPR036875 GO:0003676|GO:0008270
Sto8g0837 300 MobiDBLite consensus disorder prediction 168 205 - -
Sto8g0837 300 MobiDBLite consensus disorder prediction 220 239 - -
Sto8g0837 300 PANTHER SERINE/ARGININE RICH SPLICING FACTOR 6 282 - -
Sto8g0837 300 SUPERFAMILY RNA-binding domain, RBD 7 100 IPR035979 GO:0003676
Sto8g0837 300 Gene3D - 3 84 IPR012677 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Sto8g0837 Sto-Chr8 5294274 5296408 Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Sto8g0837 K12896 - gmx:100812698 360.533