Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Sto8g0830 atgaagaagcaaTTGACAGGCATACGGGATGATACTGCCCTGCAGTCTGCAATCCGAGCAGGAAATTTAGAACTGGCGCGGGAAATCATTTCTGAGAATGGAGATGCGGAATTAAAGGAGTTGCTCTCTAAGCAAAACCGCTATGGTGAAACTGCCCTATACGTTGCGGCGGAAAATGGCCATGTTGATTTAGTGAAGCAACTTATCGGGTACCACGATATTAGTTTGGCCAGCGTCAAAGCTAGAAATGGTTTCGATGCATTCCATATTGCTGCTAAAAATGGGCACCTGGAGATCTTGAAGGTCCTCAGGGAGGCCATCCCTGAACTTTCAATGACTGTTGATCTGTCAAACACTACAGCATTGCACACTGCTGCAGCACAAGGACATATCGAGGTAGTAAATTTTCTCTTGGACAAAGGTAGCAATCTGGTCACTATTTCAAAAAGTAATGGCAAGACTGCGTTGCATTCTGCCGCAAGACATGGCCATGTGGAGGTCATCAAGACCCTTTTGAGCAGAGAACCTGAAATTGTTATGAGAATAGATAAGAAGGGTCAGACAGCGCTTCATATGGCAGTTAAAGGACAAAATCTTGAGTTGGTGGACGAGCTTGTGAAATCGTCCCCGTCTTTGACTAACGCAGTTGATACCAAGGGAAACACTGCACTGCATATCGCAACTCGGAAAGGTCGTCTACAGATTGTTCGGAAGCTACTAGAAAACAGAGGAACAGACACAGATGTGATTAATAAATCTGGAGAAACTGCTCTGGACGTGGCAGAGAAAAATGGACACTCGGACATTGTCAGCATTCTGCAAGATCATGGAGCGCAGAGTGCCAAGTCCATCAAGTCACCTACTACAAACCCTGCCCTTGAATTCAAACGCACAGTAAGTGACATAAAAAGTGGGGTTCATAACCAGCTGGAACACACTATCAGAACACGAAGACGCATGCAAGGGATAGCAAAGCGACTCAACAAAATGCAAACCGAGGGCCTTAACAATGCAATCAACTCCAACACTGTGGTTGCTGTTCTTATTGCAACAGTTGCGTTTGCTGCCATATTCAACATCCCAGGCCAATATCCTGAGATCGACAAAGAACCACTCCCTCCTGGAATGTCCCCTGGGGAAGCAAACATTGGTCCAAAAATGGCATTTTTGATATTTTTGATCTTTGATTCTACTGCACTCTTCATATCTCTAGCTGTTGTGGTTGTGCAAACATCAGTTGTGGTTATTGAGAGAGAAGCGAAGAAACAGATGATGGCGGTTATAAATAAGTTGATGTGGTTAGCCTGTGTGCTAATATCTGTGGCATTCCTTGCAATGTCTTACATTGTTGTGGGGGATCATAAATGGTTGGCTATTGCAGCTACAGTTTTAGGGACAGTGATAATGGCAGCTACTCTAGGAACACTATGTTATTGGGTGATTGCTCATAGAGTTGAGGCCTCCAGATTGCGAAGTATTAGGAGGTCCACAATGAGCAGTAGACAATCTATGTCTATGTCTATGATTTCAAATTCGGAGAATGAGTACAAGACTGTGTATGCAATATAA 1569 0.4379 MKKQLTGIRDDTALQSAIRAGNLELAREIISENGDAELKELLSKQNRYGETALYVAAENGHVDLVKQLIGYHDISLASVKARNGFDAFHIAAKNGHLEILKVLREAIPELSMTVDLSNTTALHTAAAQGHIEVVNFLLDKGSNLVTISKSNGKTALHSAARHGHVEVIKTLLSREPEIVMRIDKKGQTALHMAVKGQNLELVDELVKSSPSLTNAVDTKGNTALHIATRKGRLQIVRKLLENRGTDTDVINKSGETALDVAEKNGHSDIVSILQDHGAQSAKSIKSPTTNPALEFKRTVSDIKSGVHNQLEHTIRTRRRMQGIAKRLNKMQTEGLNNAINSNTVVAVLIATVAFAAIFNIPGQYPEIDKEPLPPGMSPGEANIGPKMAFLIFLIFDSTALFISLAVVVVQTSVVVIEREAKKQMMAVINKLMWLACVLISVAFLAMSYIVVGDHKWLAIAATVLGTVIMAATLGTLCYWVIAHRVEASRLRSIRRSTMSSRQSMSMSMISNSENEYKTVYAI 522
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Sto8g0830 522 ProSiteProfiles Ankyrin repeat profile. 151 183 IPR002110 GO:0005515
Sto8g0830 522 ProSiteProfiles Ankyrin repeat profile. 83 103 IPR002110 GO:0005515
Sto8g0830 522 ProSiteProfiles Ankyrin repeat region circular profile. 185 207 - -
Sto8g0830 522 ProSiteProfiles Ankyrin repeat region circular profile. 219 252 - -
Sto8g0830 522 PRINTS Ankyrin repeat signature 152 167 IPR002110 GO:0005515
Sto8g0830 522 PRINTS Ankyrin repeat signature 269 283 IPR002110 GO:0005515
Sto8g0830 522 Gene3D - 1 145 IPR036770 -
Sto8g0830 522 ProSiteProfiles Ankyrin repeat region circular profile. 253 279 - -
Sto8g0830 522 SMART ANK_2a 185 214 IPR002110 GO:0005515
Sto8g0830 522 SMART ANK_2a 48 76 IPR002110 GO:0005515
Sto8g0830 522 SMART ANK_2a 253 282 IPR002110 GO:0005515
Sto8g0830 522 SMART ANK_2a 83 112 IPR002110 GO:0005515
Sto8g0830 522 SMART ANK_2a 151 180 IPR002110 GO:0005515
Sto8g0830 522 SMART ANK_2a 117 146 IPR002110 GO:0005515
Sto8g0830 522 SMART ANK_2a 9 38 IPR002110 GO:0005515
Sto8g0830 522 SMART ANK_2a 219 249 IPR002110 GO:0005515
Sto8g0830 522 ProSiteProfiles Ankyrin repeat region circular profile. 48 69 - -
Sto8g0830 522 ProSiteProfiles Ankyrin repeat profile. 48 69 IPR002110 GO:0005515
Sto8g0830 522 PANTHER PROTEIN PHOSPHATASE 1 REGULATORY SUBUNIT 1 522 - -
Sto8g0830 522 Pfam Ankyrin repeats (3 copies) 217 279 IPR002110 GO:0005515
Sto8g0830 522 Pfam Ankyrin repeats (3 copies) 151 209 IPR002110 GO:0005515
Sto8g0830 522 Pfam Ankyrin repeats (3 copies) 10 74 IPR002110 GO:0005515
Sto8g0830 522 Pfam Ankyrin repeats (3 copies) 80 144 IPR002110 GO:0005515
Sto8g0830 522 ProSiteProfiles Ankyrin repeat profile. 185 217 IPR002110 GO:0005515
Sto8g0830 522 ProSiteProfiles Ankyrin repeat region circular profile. 151 178 - -
Sto8g0830 522 Gene3D - 146 321 IPR036770 -
Sto8g0830 522 SUPERFAMILY Ankyrin repeat 13 278 IPR036770 -
Sto8g0830 522 ProSiteProfiles Ankyrin repeat profile. 117 149 IPR002110 GO:0005515
Sto8g0830 522 Pfam Domain of unknown function 333 450 IPR026961 -
Sto8g0830 522 ProSiteProfiles Ankyrin repeat profile. 219 252 IPR002110 GO:0005515
Sto8g0830 522 ProSiteProfiles Ankyrin repeat region circular profile. 83 103 - -
Sto8g0830 522 PANTHER ANKYRIN REPEAT PLANT PROTEIN 1 522 - -
Sto8g0830 522 ProSiteProfiles Ankyrin repeat profile. 253 279 IPR002110 GO:0005515
Sto8g0830 522 ProSiteProfiles Ankyrin repeat region circular profile. 117 144 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Sto8g0830 Sto-Chr8 5255696 5258108 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Sto8g0830 1 522 Miscellaneous Gene Families AT1G07710 66.224 0.0 647
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Sto8g0830 - - gmx:100802370 789.645