Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Sto8g0829 ATGAGAAGCATCTGTTTTCACCCTAAGACTCCGTCGTTCTCCACGAGTActaccaataataataataatcccaCTTCCATCTCCAACTCCTCTGATTCAAGCTGTTCGACGCGAGTGATGAGCTTTTCGGAATCCAGCATAGACCGGTGCATCGAGGAAGCACAGGCCTTGATATTGAAGTGGGACCTAGAAACTTCGGCCTACGCCCAAGTCACCTCCCTCTTCTACAACGACAAACCCGAGGCCATGCAATACATCAAGTGCGTTACCCAGCTTCACAAAGCCATGCATCTCTTACTCTCCTACAACCCTGTCTCCTCCCACAAGCTCACTCTCGCCAATCACCTCATCCAGAAGGCTATGAAGAGACTCCAGAAAGAGTTCTACCAAATCCTCTCCATCAATCGGGCTTATTTGGACCCCGAGTCTGTCTCCACCACTAGTACATCTTCCATCTCCTATTCCAGCTTTTCCGATTTCGATAATGTCCTCGACGATATTGCTACTTCCCCAGACGACGACGTTCCGCCCTCTGCTGATTCCATCTCTCAATTAGAACTCGCCTCTTCCCTTGCCATGAAGGATCTAAGGTCCATTGCCGACTGTATGATCTCTTGCGGTTATTCCAAGGAATGTGTCCACGTGTACAGAGTTATTCGAAAATCCATCATCGACGAAGGCATTTATCGTCTCAACTTGGAGAAATTGAGCGCTTCTCATGTCAATAGGATGGATTGGAAAGTTGTTGAGTTGAAGATTAAGATTTGGTTAGAGGCGGTGAAGGTTGCAGTGAGGACGCTCTTCAACGGAGAGAGAATCTTGTGCGATAATGTCTTCGCTACTTCAGATCTCATCAGAGAATGTTGCTTCGCTGATATATCCAGACACGGAGCCAATTTGGTGTTCGCATTACCCGAACTCGTCGTCTCCAGGACGAAGAAATCGCCTCCGGATAAGATTTTTCGTCTGCTTGACATGTTCACTGTCTTATCTGAACTATGGCCGGAGATTCAATCCATCTTCTCTTTCAATTCCACATCGGAAATTTCATCTCAAGTATTCAATTCACTGAGCCACCTCACCGACTCCGTCCGAACCATGCTTTCAGAGTTCGAGTCCAGGATCCAAAAGGACACATCCAAATCATCGGTAAAATCCGGCGGAGTCCATCAGTTGACGACGCAAGCAATGGACTACCTCTCTAATCTCGCCGATTACAGTAACTTGCTCTACGACATATTCGTAGACTGGACTCCTCCGCCGAAATCGCCGCTGCCGGAATACCTTACAGACCGTCCAGATTCCGATGAATCGTCGGCGGCGACACCGTTCTCGGCGAGGATAGCCGGGCTGATTTTCGTTCTTATGTGTAAGCTGGACAGCAAGACGAAGCATTGCAAGGACGCTTCGGTTTCGTACCTGTTTCTAGCGAACAATCTCCAGCACGTAATAGACACAGTGCGTAACTCGGACTTGCAATACGTGCTGGGCGAGGAGTGGATCCTGAAGCACGAAAAGAAGTTGAAAGGATTTCTGATGAAGTACGAGAAGATGGCGTGGGGCGAAGTGTTTTCTTGCTTGCCGGAGAAGGCGGCGGTGCGGCCCGAAGAGACGAAGGTCATATTCAGTAGTTTCAACTTCCGTTTCGAGGAAGCATATAGGAAACAGAATTGTCTAACGGTGGCGCACCGGAAGTTGCGAGACGAGATAAAAGGGTCGATAGCGGGAAAAATAGTGGGGAGATATCGCGAGTTGTATAATGCGCACAAGATGATGGTAGGATCCGTGAGAGATATGACAATGTATGTCACGTTTACCCCCGACGATGTGGAAAATTATCTGGAGAATCTGTTCTCTGCTGGAGGAGACGCCGGTAGCGTAACGACGTCGTCTTCTTCGGTTGATAGagAGGGGGCCCTACCCCCGACCCTGTGGCTGTGGGTCATGGTGGTCATGGTCATGGATCCAGAAAGGGGTCCCACCCGCGCCCCCTTTCCCTTCCCCCTCAACCCTCCCTCTGAGCCCACCACCCCCACCACCCCTCCTCCTCCCactctcttcctctcctcctcCGCCAAGGCCCTCCACGTTTCCAACTCCAGCAATTCCCTCGCCTcttattccaattccaattccggCAAGCGTTACGATAAGAAGAAGTACGTCAAGCAGGTCACCGGCCGCCACCATGACACCGAGCTTCACCTCGCCGCCCAGCGCGGTGACGTTATTGTCATTCGCCACATTCTCGGTGAGATCGATGCCCAGATGGTCGGAACCGCAGGCGGCGCCGATTTTGATGCCGAGCTTGAGCAGATTAGGTCCGCCATTGTCAATGAGGTGAACGAGTTGGGGGAGACGCCTTTGTTCGTTGCTGCCGAGAGAGGCCACATTGACGTCGTCAACGAGCTCCTCCCTTTCGCCTCCAACGAGGGCCTTTCCTTCAAAAATCGATCCGGCTACACTCCCCTCCATGTTGCTGCTAGCCAAGGTCACCAAGCCATTGTTCAGGTGTTACTAAACCATGATCCAGAGCTAATACATACATTTGGTCAATCAAATGCAACTCCTCTTATATCAGCAGCTACAAAAGGGCATGCAGAAGTTGTTGATCTGCTGCTGGAACGAGATCCTAGTATGTTGGAGTTGTCTAGATCCAATGGAAAGAATGCACTCCATTTTGCTGCCAGGCAAGGACACGCTCGTATTGTAAAATCCTTACTCAGAAAGGATCCACAACTTACTCGAAGGGTTGATAAGAAAGGACAGACGGCACTGCATATGGCTGTAAAGGGGGTTAGTTGTGAAGTGGTGAAGTTGCTTCTTGATACAGATCCAGCAACCGTCATGCTACCTGACAAGTTTAACAACACTGCATTGCATATAGCTACCAGGAAGAAGAGGGCAGAGATATTGAATGAGTTATTACTTCTTCCAGACATCAATGTTAATGCCCTAACACGGGACCATAAGACATCTCTTGACATTGCTGAAGGACTTCCTCCATCTGAAGAAATGCTAGAGATAAGAGATTGCCTGCTTCGAAATGGTGCTGTTAAAGCAAACGATCTTAACCAGCCAAAGGATGAGCTAAGGAAGACTGTGACAGAGATTAGGAAGGACGTCCAAATTCAGCTTGAACAATCTCGAAAAACAAACAAGAATGTTAATGGGATTGCCAAAGAGTTACGAAGGCTGCACAGAGAGGGGATCAACAATGCTACCAACTCAGTCACAGTGGTTGCTTCACTCTTTGCAACAGTTGCATTTGCAGCAATTTTCACGGTTCCTGGTGGGGATGATGACCATGGGATGGCTCTGATGGTACAAACTAAATCTTTCAAGATCTTCTTCATCTCTAATTCAATTGCACTCTTTACATCATTGGCTGTTGTCCTGGTTCAAATCACAGTTGTCAGAGGGCATTTGAAGACTGAAAGGAGGGTTGTGGAGGTGATTAATAAGTTGATGTGGTTAGCCTCTGTCTGTACCACAGTTGCATACATATCATCAGCTTATATAGTAATTGGTCGACGTAACAAGTGGGCTGCAACCCTTGTTACTGTTATAGGGGGACTTATAATGGCAGGGGTTCTTGGTGCCATGACATTCTATGTGGTTAAATCCAACCACATGCGAAGggtgagaaagagagaaaaacttTCCAAGAGACACTCATGGCATCATCATTCTGATTCTGATTCAGAAGTAACTTATAGTGAAAAGCAGCTTTGGAGGTTTCAGGTGTTGACAAAGCAAAACGATGGATTTTAG 3774 0.4719 MRSICFHPKTPSFSTSTTNNNNNPTSISNSSDSSCSTRVMSFSESSIDRCIEEAQALILKWDLETSAYAQVTSLFYNDKPEAMQYIKCVTQLHKAMHLLLSYNPVSSHKLTLANHLIQKAMKRLQKEFYQILSINRAYLDPESVSTTSTSSISYSSFSDFDNVLDDIATSPDDDVPPSADSISQLELASSLAMKDLRSIADCMISCGYSKECVHVYRVIRKSIIDEGIYRLNLEKLSASHVNRMDWKVVELKIKIWLEAVKVAVRTLFNGERILCDNVFATSDLIRECCFADISRHGANLVFALPELVVSRTKKSPPDKIFRLLDMFTVLSELWPEIQSIFSFNSTSEISSQVFNSLSHLTDSVRTMLSEFESRIQKDTSKSSVKSGGVHQLTTQAMDYLSNLADYSNLLYDIFVDWTPPPKSPLPEYLTDRPDSDESSAATPFSARIAGLIFVLMCKLDSKTKHCKDASVSYLFLANNLQHVIDTVRNSDLQYVLGEEWILKHEKKLKGFLMKYEKMAWGEVFSCLPEKAAVRPEETKVIFSSFNFRFEEAYRKQNCLTVAHRKLRDEIKGSIAGKIVGRYRELYNAHKMMVGSVRDMTMYVTFTPDDVENYLENLFSAGGDAGSVTTSSSSVDREGALPPTLWLWVMVVMVMDPERGPTRAPFPFPLNPPSEPTTPTTPPPPTLFLSSSAKALHVSNSSNSLASYSNSNSGKRYDKKKYVKQVTGRHHDTELHLAAQRGDVIVIRHILGEIDAQMVGTAGGADFDAELEQIRSAIVNEVNELGETPLFVAAERGHIDVVNELLPFASNEGLSFKNRSGYTPLHVAASQGHQAIVQVLLNHDPELIHTFGQSNATPLISAATKGHAEVVDLLLERDPSMLELSRSNGKNALHFAARQGHARIVKSLLRKDPQLTRRVDKKGQTALHMAVKGVSCEVVKLLLDTDPATVMLPDKFNNTALHIATRKKRAEILNELLLLPDINVNALTRDHKTSLDIAEGLPPSEEMLEIRDCLLRNGAVKANDLNQPKDELRKTVTEIRKDVQIQLEQSRKTNKNVNGIAKELRRLHREGINNATNSVTVVASLFATVAFAAIFTVPGGDDDHGMALMVQTKSFKIFFISNSIALFTSLAVVLVQITVVRGHLKTERRVVEVINKLMWLASVCTTVAYISSAYIVIGRRNKWAATLVTVIGGLIMAGVLGAMTFYVVKSNHMRRVRKREKLSKRHSWHHHSDSDSEVTYSEKQLWRFQVLTKQNDGF 1257
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Sto8g0829 1257 MobiDBLite consensus disorder prediction 8 34 - -
Sto8g0829 1257 Gene3D Exocyst complex component Exo70 60 623 - -
Sto8g0829 1257 Pfam Ankyrin repeats (3 copies) 734 843 IPR002110 GO:0005515
Sto8g0829 1257 Pfam Ankyrin repeats (3 copies) 919 983 IPR002110 GO:0005515
Sto8g0829 1257 Pfam Ankyrin repeats (3 copies) 853 915 IPR002110 GO:0005515
Sto8g0829 1257 Gene3D - 694 878 IPR036770 -
Sto8g0829 1257 ProSiteProfiles Ankyrin repeat profile. 887 919 IPR002110 GO:0005515
Sto8g0829 1257 ProSiteProfiles Ankyrin repeat profile. 819 846 IPR002110 GO:0005515
Sto8g0829 1257 ProSiteProfiles Ankyrin repeat profile. 921 943 IPR002110 GO:0005515
Sto8g0829 1257 ProSiteProfiles Ankyrin repeat profile. 784 805 IPR002110 GO:0005515
Sto8g0829 1257 MobiDBLite consensus disorder prediction 663 688 - -
Sto8g0829 1257 Pfam Domain of unknown function 1069 1175 IPR026961 -
Sto8g0829 1257 SUPERFAMILY Cullin repeat-like 74 618 IPR016159 -
Sto8g0829 1257 ProSiteProfiles Ankyrin repeat region circular profile. 784 805 - -
Sto8g0829 1257 MobiDBLite consensus disorder prediction 663 685 - -
Sto8g0829 1257 Pfam Exo70 exocyst complex subunit 256 615 IPR046364 GO:0000145|GO:0005546|GO:0006887
Sto8g0829 1257 Gene3D - 879 1038 IPR036770 -
Sto8g0829 1257 ProSiteProfiles Ankyrin repeat region circular profile. 887 910 - -
Sto8g0829 1257 ProSiteProfiles Ankyrin repeat region circular profile. 921 943 - -
Sto8g0829 1257 ProSiteProfiles Ankyrin repeat profile. 853 885 IPR002110 GO:0005515
Sto8g0829 1257 PANTHER EXOCYST COMPLEX PROTEIN EXO70 1 629 IPR004140 GO:0000145|GO:0006887
Sto8g0829 1257 PANTHER EXOCYST SUBUNIT EXO70 FAMILY PROTEIN 1 629 - -
Sto8g0829 1257 SUPERFAMILY Ankyrin repeat 734 1012 IPR036770 -
Sto8g0829 1257 SMART ANK_2a 887 916 IPR002110 GO:0005515
Sto8g0829 1257 SMART ANK_2a 729 758 IPR002110 GO:0005515
Sto8g0829 1257 SMART ANK_2a 921 951 IPR002110 GO:0005515
Sto8g0829 1257 SMART ANK_2a 819 849 IPR002110 GO:0005515
Sto8g0829 1257 SMART ANK_2a 955 985 IPR002110 GO:0005515
Sto8g0829 1257 SMART ANK_2a 784 813 IPR002110 GO:0005515
Sto8g0829 1257 SMART ANK_2a 853 882 IPR002110 GO:0005515
Sto8g0829 1257 MobiDBLite consensus disorder prediction 1 34 - -
Sto8g0829 1257 ProSiteProfiles Ankyrin repeat region circular profile. 819 846 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Sto8g0829 Sto-Chr8 5239580 5251151 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Sto8g0829 672 1236 Miscellaneous Gene Families AT3G09550 70.466 0.0 798
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Sto8g0829 - - qsu:112025481 786.949