Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Sto8g0768 TTGTCGAATTTGGTCAGTGGTAAAAACGTATTTAGTTTGCTAGCTCAGAGAGAGATTTCAGCTAGATCAAAACATGTGCCAAAACGGTGCTGGGGAGAAGCATCTAAACCAAAAAGTGGATCTTGCCCTCATCCTAAAAGTGATGCAGTGAGAGATGCAAAGCGTGGTCTCCTATCATGGGTTGAGGCTGAGTCATTGCGGCATTTGTCAGCTAAATATTGCCCTTTGTTGCCTCCCCCACGGTCTACTATTGCTGCAGCATTTAGTCCAGATGGAAAAGTGCTTGCATCCACACATGGTGATCACACAGTAAAGATAATTGATTGTGAAACTGGAAGTTGCTTAAAGGTGTTAATTGGCCATAGGAGGACCCCTTGGGTGGTTAGGTTCCATCCATTGCAGCCACAAATTCTTGCTAGTGGGAGCTTGGATCAAGAAGTTCGCCTATGGGATGCTAATACTTCAGAGTGCATATTGTCTCACCATTTCtATCGTCCCATTGCATCCATTGCATTCCATGCCAAAGGTGAAATACTTGCTGTTGCATCAGGCCACAAGCTGTACATATGGCACTACAACAAGAGAGGTGAAGCATCCTCACCAACATTTGTGTTGAAGACAAGGCGTTCACTTCGGGCTGTGCATTTTCATCCCCATGCTGCGCCATATCTATTAACTGCTGagGTCAACGATCTTGACTCTTCAGATTCCTCAATGACACAGGCTACATCCCTTGGTTATTTACAATATCCTCCACCCGCTGTGATTGTTGCAAATATTCAGTTTAAAGAACATATTAGTTTGTCCAGTGAAAATGGTGATGATTCAAGAATGGAACCACAAAATTCTGGTCATGTTACTGGTTCAGATAACATGCAAGTTGAATCTTCTGGTTCTGCGCAGTATCAAGTGGTCACAAATGCTACTGAGCAGTATGATACTACAGTGTCTCCCATGGATACATTCTCTGAGATTCCTACAACCTCTCAAACTGGTACAGAATACACTGCCCATAATACTTTCTCTAATAGAATGGGCATTGGTATTAGCAACCTTGCTATGGATGGTATGGAGACTGATGAAACAGAACCAGCTGAACATGGACTATATAGACAAACAGCAAATCGTGAGGGTATCTCTGAGTTGGGTcaatttcatcagttttttccttCAAGAGACTCAAATGGATGGGAGTTGCCCTTTCTGCAAGGATGGTTGATGGGTCAAAGCCAAGCTGGTGTTCCCATGGTGCTTCCTCACCTGGGTGGTAGTCGTGACAACCTAACTCAACAGATTGGTTCTTCCACTGTGGAATCTAATTTGTCTACTCATGATGGTGCAACAACAGTTCCGTCTTCAGCCATGCCTGGGAGCATAAGTATACCAGGAGCATCAGGGAGATCTGGTATACGAAACCATTTTCCACAATCTCAAGTTCCTGCATCAGAATCTGGCAATCTTGATGGGACTGCTGCCGCAGAGTTGCCTTGCACAGTAAAGCTAAGAGTCTGGTCACATGACATAAAAAATCCCTGCACACCACTAAATGCTGAAAGATGCCTCCTAACCATACCGCATGCTGTCCTGTGCAGTGAAATGGGTGCCCATTTTTCCCCATGCGGTAGATTTTTAGCTGCATGTGTTGCATGTATGCTTCCTCATATAGAAGCTGATCCTGGATTACAAGCTCAAGTACACCAGGATCCTGGAGTTGCAACATCACCAACACGACATCCAATCTCAGCACACCAAGTTATGTACGAGCTTCGGATATATTCCCTTGAGAAGGCAACATTTGGAATGGTGCTTGCATCGAGGGCAATTAGAGCAGCTCACTGTCTGACTTCAATCCAgTTCTCACCCACTTCTGAGCACATACTCCTTGCCTATGGTAGACGTCATGGGTCTCTTCTTAAAAGCATTGTCATTGATGGAGAAACAACCCTGCCTATATATACAGTGTTAGAGGTATACAGAGTGTCAGATATGAAACTTGTCATGGTGCTTCCTAGTGCTGAGGATGAGGTCAATGTGGCATGCTTTCATCCTTATCCTGGGGGAGGACTTGTTTATGGAACTAAGGAAGGGAAACTTAGGGTCCTCCAATATGATGGAGCTCACGGTGTTAATGGCGCTGGATCAAGTTACTTTCCTGAGGAAAACATGATTGGACCCAATTAA 2181 0.4406 LSNLVSGKNVFSLLAQREISARSKHVPKRCWGEASKPKSGSCPHPKSDAVRDAKRGLLSWVEAESLRHLSAKYCPLLPPPRSTIAAAFSPDGKVLASTHGDHTVKIIDCETGSCLKVLIGHRRTPWVVRFHPLQPQILASGSLDQEVRLWDANTSECILSHHFYRPIASIAFHAKGEILAVASGHKLYIWHYNKRGEASSPTFVLKTRRSLRAVHFHPHAAPYLLTAEVNDLDSSDSSMTQATSLGYLQYPPPAVIVANIQFKEHISLSSENGDDSRMEPQNSGHVTGSDNMQVESSGSAQYQVVTNATEQYDTTVSPMDTFSEIPTTSQTGTEYTAHNTFSNRMGIGISNLAMDGMETDETEPAEHGLYRQTANREGISELGQFHQFFPSRDSNGWELPFLQGWLMGQSQAGVPMVLPHLGGSRDNLTQQIGSSTVESNLSTHDGATTVPSSAMPGSISIPGASGRSGIRNHFPQSQVPASESGNLDGTAAAELPCTVKLRVWSHDIKNPCTPLNAERCLLTIPHAVLCSEMGAHFSPCGRFLAACVACMLPHIEADPGLQAQVHQDPGVATSPTRHPISAHQVMYELRIYSLEKATFGMVLASRAIRAAHCLTSIQFSPTSEHILLAYGRRHGSLLKSIVIDGETTLPIYTVLEVYRVSDMKLVMVLPSAEDEVNVACFHPYPGGGLVYGTKEGKLRVLQYDGAHGVNGAGSSYFPEENMIGPN 726
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Sto8g0768 726 PANTHER ACTIVATING MOLECULE IN BECN1-REGULATED AUTOPHAGY PROTEIN 1 5 487 - -
Sto8g0768 726 SMART WD40_4 111 151 IPR001680 GO:0005515
Sto8g0768 726 SMART WD40_4 662 702 IPR001680 GO:0005515
Sto8g0768 726 SMART WD40_4 154 191 IPR001680 GO:0005515
Sto8g0768 726 SMART WD40_4 70 108 IPR001680 GO:0005515
Sto8g0768 726 ProSiteProfiles Trp-Asp (WD) repeats circular profile. 118 156 - -
Sto8g0768 726 PANTHER ACTIVATING MOLECULE IN BECN1-REGULATED AUTOPHAGY PROTEIN 1 488 723 - -
Sto8g0768 726 MobiDBLite consensus disorder prediction 437 457 - -
Sto8g0768 726 SUPERFAMILY Quinoprotein alcohol dehydrogenase-like 81 704 IPR011047 -
Sto8g0768 726 MobiDBLite consensus disorder prediction 270 300 - -
Sto8g0768 726 PANTHER TRANSDUCIN FAMILY PROTEIN / WD-40 REPEAT FAMILY PROTEIN 488 723 - -
Sto8g0768 726 PANTHER TRANSDUCIN FAMILY PROTEIN / WD-40 REPEAT FAMILY PROTEIN 5 487 - -
Sto8g0768 726 Pfam WD domain, G-beta repeat 112 151 IPR001680 GO:0005515
Sto8g0768 726 Pfam WD domain, G-beta repeat 85 108 IPR001680 GO:0005515
Sto8g0768 726 ProSitePatterns Trp-Asp (WD) repeats signature. 138 152 IPR019775 -
Sto8g0768 726 Gene3D - 67 243 IPR015943 GO:0005515
Sto8g0768 726 ProSiteProfiles Trp-Asp (WD) repeats profile. 118 160 IPR001680 GO:0005515
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Sto8g0768 Sto-Chr8 4832301 4837141 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Sto8g0768 85 252 Miscellaneous Gene Families AT5G08390 24.862 1.40e-07 53.1
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Sto8g0768 - K17985 gmx:100794246 1169.45
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Sto8g0768 8 4832301 4837141 Sto8g0768 8 4832301 4837141 ECH