Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Sto8g0762 ATGGAGGACGAGGCTGATATATTCGATGGTATTAGAGCTCAATTTCCTCTTACTTTTGGAAAGCAATCCAAGTCTCAAACCCCTCTTGAATCCATCCACAATGCCACTCGTCGTTCCACTTCCAATCTCACCTCTaaaccctcttcttcttcttcatcaaatCCCTCGACTACAACCTCCGACAGCAAGAATGCCGATgaccttccttctctctcttcctcttccaaGGCTTGGCTTGTTTCCATCCGCAActccaaaaaccaaaaccctagccCGGATTCTACGGCCGACCGTGGTGGCGCTTCTTCCATGATGGGACCGCCTCGGCCGCCGCCTGCGGTGGATTCTGATGAGGATGGAGGTGTTATGGTGGGACCGCCTCGGCCGCCTGAGGTGGAAGAGGATGGTGGTGCTATGATTGGGCCGCCTCGACCGCCTGTTGGTTTGGGTCCGAGTGAAGAAGGGGATGAGGATGATGAGGTGGGGAATCGGTTTCGGATTCCGCTTAGCAACGAGATTGTGCTCAAGGGCCACACTAAGGTTGTATCAGCTCTTGCTGTGGATCATACCGGGTCTAGGGTACTTTCTGGAAGTTATGACTATACAGTACGGATGTATGATTTTCAAGGAATGAATTCTCGTCTGCAATCATTTCGGCAACTAGAGCCATTTGAAGGTCATCAGGTTCGCAATCTAAGCTGGAGTCCAAGTGCAGATCGCTTTTTGTGTGTGACAGGATCAGCTCAAGCAAAGATCTATGACCGTGATGGACTTACTTTGGGAGAGTTTGTGAAGGGGGACATGTATATTCGTGACCTAAAAAATACTAAAGGTCACATATCTGGATTGACATGTGGAGAGTGGCACCCAAAAACTAAGGAAACAATTTTAACATCATCAGAGGATGGGTCACTTCGTATATGGGATGTAAATGACTTCAAAAGTCAGAAGCAGGTTATAAAACCAAAGCTTGCAAGACCTGGAAGAGTTCCTGTTACCACATGTGCATGGGATCGTGAAGGTAAATGCATAGCTGGTGGTATAGGAGATGGTTCTATACAGATGTGGAGTATTAAGCCTGGGTGGGGAAGCAGACCAGATGTGCATATTGAAAGAGGGCATTCAGATGATATTAGTGGTTTGAAGTTTTCTAGTGATGGGAGAATTTTACTGTCAAGAAGCTTTGATGGTTCATTGAAGgtttgggatttacgcaAAATGAAGGAACCACTAAAGGTATTTGAAGATCTCCCAAATCACTATGGACAAACAAATATTGCTTTCAGTCCTGATGAGCAACTATTTTTTACTGGAACATCTGTTGAAAGGGGGAGTTCGAGTGGAGGTTTATTATGTTTCTATGATCGTGTAAACCTTGAACTTGTTTCAAGAGTTGGCATATCACCTACTTGTAGTGTTGTGCAGTGTGCTTGGCATCCTAAACTGAATCAGATCTTTGCAACTGTTGGTGATAAAAGCCAAGGAGGAACTCACGTTCTATATGATCCAACCCTCAGTGAGAGAGGAGCTCTTGTTTGTGTTGCACGAGCACCAAGGAAAAAGTCCATTGATGACTTTGAGGCAAAACCTGTAGTTCACAATCCTCACGCCTTACCACTATTTAGAGATCAGCCAAGCCGTAAGCGTCAACGAGATAAAATACTGAAGGATCCACTGAAATCCCATAAGCCTGAACTTCCCATAACAGGACCTGGCTTTGGTGGACGAGTTGGTGCAAGTCAAGGAAGCTTACTTACTCAATATCTTATGAAGCAAGGTGGTATGATTAAGGAGACGTGGATGGAGGAAGATCCAAGAGAAGCTATCCTGAAATATGCTGATGTTGCAGCAAAGGATCCAAAGTTCATAGCTCCAGCATATGCACAAACCCAGCCTGAGCCTGTTTTCCAGAAGTCAGATTCtgatgaagaagagaaataA 1941 0.4286 MEDEADIFDGIRAQFPLTFGKQSKSQTPLESIHNATRRSTSNLTSKPSSSSSSNPSTTTSDSKNADDLPSLSSSSKAWLVSIRNSKNQNPSPDSTADRGGASSMMGPPRPPPAVDSDEDGGVMVGPPRPPEVEEDGGAMIGPPRPPVGLGPSEEGDEDDEVGNRFRIPLSNEIVLKGHTKVVSALAVDHTGSRVLSGSYDYTVRMYDFQGMNSRLQSFRQLEPFEGHQVRNLSWSPSADRFLCVTGSAQAKIYDRDGLTLGEFVKGDMYIRDLKNTKGHISGLTCGEWHPKTKETILTSSEDGSLRIWDVNDFKSQKQVIKPKLARPGRVPVTTCAWDREGKCIAGGIGDGSIQMWSIKPGWGSRPDVHIERGHSDDISGLKFSSDGRILLSRSFDGSLKVWDLRKMKEPLKVFEDLPNHYGQTNIAFSPDEQLFFTGTSVERGSSSGGLLCFYDRVNLELVSRVGISPTCSVVQCAWHPKLNQIFATVGDKSQGGTHVLYDPTLSERGALVCVARAPRKKSIDDFEAKPVVHNPHALPLFRDQPSRKRQRDKILKDPLKSHKPELPITGPGFGGRVGASQGSLLTQYLMKQGGMIKETWMEEDPREAILKYADVAAKDPKFIAPAYAQTQPEPVFQKSDSDEEEK 646
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Sto8g0762 646 MobiDBLite consensus disorder prediction 626 646 - -
Sto8g0762 646 CDD WD40 174 493 - -
Sto8g0762 646 PANTHER GASTRULATION DEFECTIVE PROTEIN 1-RELATED 6 646 - -
Sto8g0762 646 SMART WD40_4 168 207 IPR001680 GO:0005515
Sto8g0762 646 SMART WD40_4 364 403 IPR001680 GO:0005515
Sto8g0762 646 SMART WD40_4 313 357 IPR001680 GO:0005515
Sto8g0762 646 SMART WD40_4 266 309 IPR001680 GO:0005515
Sto8g0762 646 SMART WD40_4 217 254 IPR001680 GO:0005515
Sto8g0762 646 MobiDBLite consensus disorder prediction 18 159 - -
Sto8g0762 646 ProSiteProfiles Trp-Asp (WD) repeats profile. 371 412 IPR001680 GO:0005515
Sto8g0762 646 MobiDBLite consensus disorder prediction 543 563 - -
Sto8g0762 646 MobiDBLite consensus disorder prediction 18 98 - -
Sto8g0762 646 ProSiteProfiles Trp-Asp (WD) repeats circular profile. 371 405 - -
Sto8g0762 646 SUPERFAMILY WD40 repeat-like 162 491 IPR036322 GO:0005515
Sto8g0762 646 Pfam WD domain, G-beta repeat 274 309 IPR001680 GO:0005515
Sto8g0762 646 Pfam WD domain, G-beta repeat 173 207 IPR001680 GO:0005515
Sto8g0762 646 Pfam WD domain, G-beta repeat 369 403 IPR001680 GO:0005515
Sto8g0762 646 ProSitePatterns Trp-Asp (WD) repeats signature. 296 310 IPR019775 -
Sto8g0762 646 ProSiteProfiles Trp-Asp (WD) repeats circular profile. 175 209 - -
Sto8g0762 646 ProSiteProfiles Trp-Asp (WD) repeats profile. 276 318 IPR001680 GO:0005515
Sto8g0762 646 Gene3D - 18 261 IPR015943 GO:0005515
Sto8g0762 646 ProSiteProfiles Trp-Asp (WD) repeats circular profile. 276 311 - -
Sto8g0762 646 Gene3D - 262 504 IPR015943 GO:0005515
Sto8g0762 646 ProSiteProfiles Trp-Asp (WD) repeats profile. 175 216 IPR001680 GO:0005515
Sto8g0762 646 PRINTS G protein beta WD-40 repeat signature 296 310 IPR020472 -
Sto8g0762 646 PRINTS G protein beta WD-40 repeat signature 344 358 IPR020472 -
Sto8g0762 646 PRINTS G protein beta WD-40 repeat signature 390 404 IPR020472 -
Sto8g0762 646 MobiDBLite consensus disorder prediction 543 574 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Sto8g0762 Sto-Chr8 4804317 4809083 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Sto8g0762 278 470 Miscellaneous Gene Families AT5G08390 23.711 5.87e-09 57.4
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Sto8g0762 K24752 - tcc:18613047 1059.67
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Sto8g0762 8 4804317 4809083 Sto8g0762 8 4804317 4809083 ECH