Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Sto8g0681 ATGTCCGGGGAAGATTTTGATGGACAAGATGCAGGCTATGTGCCTGAAAACGTTGATTTTCCACAGAATCATTCCGATGAACATGATGCAGGAGTGATTGATAACTCTGGGTTTCCTTCACAAGAGTCTGAAGAACATGATGCAGGCAATGTTGTTGAGGAATACAATCCTCCAGAAAATCACTTGGATGGACTTGATGCTGGAGATATGCCTGGGAACTTGGATTCTCCAGAAAAGCATATTGATGAACACCACGATGTAGTAGATATGCCTGAAACTTTTGATTCTCTGCAGAAACAGGAACATGATATGGATTCaaaaggaaatgaaataaaaaggtGGCCCGGATGGCCTGGAGAGAACGTATTCAGGATGTTGGTTCCTGTTCAAAAGGTTGGCAGTATTATTGGGCGTAAGGGTGAATTCATTAAGAAAATTACCGAAGAGACAAAAGCTCGTATTAAAATACTTGATGGTCCTCCTGGAACCTCAGAAAGAGCTGTAATGGTTTCCGCAAAAGAGGAGCCAGATCGAGCCATACCTCCTGCTGTGGATGGCTTATTAAGGGTTCATAAACAAATTGTCAATGTTGATCGCGATCCTGCGGATATCACATCAGCTGCTGGGCGCACAGTTGTTACAAGGCTTCTTGTAGCAGATACTCAAGCAGGAAGCTTGATTGGGAAGCAGGGGTCCACAATAAAATCCATTCAAGATAACTCTGGTTGTACCATACGTGTCCTTGGATCAGAACACTTGCCAGTTTTTGCCTTGCGAGATGATAGTGTTGTTGAAGTACAGGGGGAATCTGCTGGAGTTCACAAAGCAGTTGAACTCATTTCAACTCATCTAAGAAAGTTCTTAGTTGACCGTAGCATAGTTGGAGTCTTTGAAACACAGATGCAATCCCCAGACGTTCGAGTTAATCAGAATGTGCCACCACCACATCAACCTTGGGGTCCTCCACAAGGATTCCCAGCACCTGCTGCTGGTGGACCTCCATTTGCACCTAATCATCAGTATATGCCACCTTCACATCACTATGATAACTATTATCCGCCTTCTGACCTGCCCCCTATGGACAAGCACCTTCATCAGGGTCCACCTTCATATGGAAGGGACACATCTATGACATCCAGTGCGCAACCCCAACAATCTGTTGTGACTAAGGTTACACAGCATATGCAAATTCCCCTGTCATATGCAGATGCTGTCATAGGAACATCTGGTGCAAATATCAGCTACATTCGCCGTGCTAGTGGTGCAAGTATTACAATTCAGGAGACGAGGGGTGTACCAGGGGAGATGACTGTTGAGATAAGTGGGACTGCCTCACAGATACAGACTGCCCAACAGCTGGTGCAGAATTTCATGGCTGAAGCTGCTAGCTCGGCACAGGATCACATGGGAGGAACTATTGGCCAAGGTTACAATTCATATCCTGCTAACGCCCCCGTTTATGCATCTCCACCCTCTAGTGCCGGTGGCCATACTGGCCATGCACCTGCTGCTGACTATGGCCCTGTATATGGTACCAATTATGGCTATTAA 1551 0.4539 MSGEDFDGQDAGYVPENVDFPQNHSDEHDAGVIDNSGFPSQESEEHDAGNVVEEYNPPENHLDGLDAGDMPGNLDSPEKHIDEHHDVVDMPETFDSLQKQEHDMDSKGNEIKRWPGWPGENVFRMLVPVQKVGSIIGRKGEFIKKITEETKARIKILDGPPGTSERAVMVSAKEEPDRAIPPAVDGLLRVHKQIVNVDRDPADITSAAGRTVVTRLLVADTQAGSLIGKQGSTIKSIQDNSGCTIRVLGSEHLPVFALRDDSVVEVQGESAGVHKAVELISTHLRKFLVDRSIVGVFETQMQSPDVRVNQNVPPPHQPWGPPQGFPAPAAGGPPFAPNHQYMPPSHHYDNYYPPSDLPPMDKHLHQGPPSYGRDTSMTSSAQPQQSVVTKVTQHMQIPLSYADAVIGTSGANISYIRRASGASITIQETRGVPGEMTVEISGTASQIQTAQQLVQNFMAEAASSAQDHMGGTIGQGYNSYPANAPVYASPPSSAGGHTGHAPAADYGPVYGTNYGY 516
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Sto8g0681 516 Gene3D K Homology domain, type 1 377 467 IPR036612 GO:0003723
Sto8g0681 516 CDD PCBP_like_KH 213 281 - -
Sto8g0681 516 Pfam KH domain 214 281 IPR004088 GO:0003723
Sto8g0681 516 Pfam KH domain 392 455 IPR004088 GO:0003723
Sto8g0681 516 Pfam KH domain 123 175 IPR004088 GO:0003723
Sto8g0681 516 ProSiteProfiles Type-1 KH domain profile. 390 454 - -
Sto8g0681 516 ProSiteProfiles Type-1 KH domain profile. 211 280 - -
Sto8g0681 516 Gene3D K Homology domain, type 1 122 193 IPR036612 GO:0003723
Sto8g0681 516 ProSiteProfiles Type-1 KH domain profile. 120 187 - -
Sto8g0681 516 Gene3D K Homology domain, type 1 208 286 IPR036612 GO:0003723
Sto8g0681 516 SUPERFAMILY Eukaryotic type KH-domain (KH-domain type I) 112 175 IPR036612 GO:0003723
Sto8g0681 516 CDD KH-I 392 455 - -
Sto8g0681 516 SUPERFAMILY Eukaryotic type KH-domain (KH-domain type I) 380 461 IPR036612 GO:0003723
Sto8g0681 516 SMART kh_6 389 459 IPR004087 GO:0003676
Sto8g0681 516 SMART kh_6 210 285 IPR004087 GO:0003676
Sto8g0681 516 SMART kh_6 119 192 IPR004087 GO:0003676
Sto8g0681 516 CDD PCBP_like_KH 122 191 - -
Sto8g0681 516 PANTHER POLY(RC)-BINDING-LIKE PROTEIN 58 510 - -
Sto8g0681 516 PANTHER KH DOMAIN CONTAINING RNA BINDING PROTEIN 58 510 - -
Sto8g0681 516 SUPERFAMILY Eukaryotic type KH-domain (KH-domain type I) 204 294 IPR036612 GO:0003723
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Sto8g0681 Sto-Chr8 4227448 4231899 Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Sto8g0681 K21444 - gmx:100813235 801.586