Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Sto8g0625 ATGGGTTGGAAAGCAGCTGAGAAATTCATTAGGCActggaagattttcagaggggaCAACGTAAGCAaccattttgtAAGATATAGGTTTATTGTTAAGTTCACTAGCTCTTTTTTACCCTACACAAGTTCACAAGCATTTCTACTGGAATTACAGAATGCATTCAACCCCGGAAGACCTTGTTTCTCAAGTATGGCCGAAACTATCCTGATCCAGGCTCGAGACCCAGCAAAACTGAATATTGAAATACAAAATGCTATTGATGGGAATCAATTAGATGATAGCTGGAAGTTATTTCAGCAGCATATGCAAATAGAGGGTTTTCCCAGAAAATCTGTTGTCAACAAGCTTCTAACAGCTTTTGTGGAAAGCCTTGAGGTGCAATGGCTAGAGAAAGCTTATGGATTGGTAGAACAGGCTATAGAGGAAAGTAAACAGAACTTGTTAGAGAAGGAAGTACTTATGTATCTCTGCTTTGGTCTTGCCAAAGCTGGATTGCCAGTTCCTGCATCAACTGTTTTAAGGAAGCTGATAGATATGGAGAAATTCCCCCCTGTTACTGTCTGGTCTGCAGTTTTGGCTCACATGTCACAAACAGCAGATGGAGCTTACCTTGCTGCTGAGTTAGTTCTTGAGATAAGTTATTTATTCCAAAATAACAGAGTGGATCCACGTAAAAAGAGCAATTCACCTTTGATAGCCATGAAGCCTGATACTACTGCTTTTAACATGGCTTTGGCGGGTTGtctcttatttaatttaactaagAAAGCAGAGCAGCTTCTTGATATGATGCCTCGGATTGGTGTCAAGACTGATGCAAACTTATTGATAATAATGGCCCATGTATATGAGAGAAATGGAAGAAGAGAAGAGCTTAAGAAGCTGCAAAGGCACATAGAAGAAGCACCCAATCTTACTGACATTCAGCTCCGCCAATTCTATAATTGTTTGCTCACATGCCATTTGAAATTTGGGGATCTAGATTCTACATCAAACATGGTTTTGGAAATGCTTAGGAAAGCAAAAGAGGCAAAAAATTCTCTGGCAGCAGCTAAATTTATGATTGACACAACTGAAATTGGCCATAAATATTCTCCTGGACTGGATTCCATGCGAAATTTGAGTGTCAGTAAAGATTCAGatagtttaaaatatatagaacCAATAAGAATCACGGGTATACTCCAACCAACTGAATCAATTTATGTGAAACTGGTTAAATCTTTTCTAGAAGCTGGAAAGACCAAGGATTTGGCAGAGTTTTTAatcaaagtagaaagagaagaTTCCCCTCTTTCCAATGACAGTTCAGTCTTGGTTCAAGTCATTAATTCATGTATTTTACTTGGATGGTTGGATCAAGCACATGACCTTCTTGATGAGATGCGGTTAGCTGGAGTTAAAACTGGTTCATCTGTATATGCCTCTCTCTTGAAAGCATATTGTCAAGCAAATAGAGTTGCAGATGTCAATTCACTTATAAGAGATGCAAGGAAGGCTGGCATCCAACTGGATTCAAGCTCTTATAAGGCAATGATCCAATCCAGGGTGGTTCAGGAGGATACACAAGGAGCACTCCGTTTATTCAAAGAGATGAAAGAGGCTAAAATTCCAAAAGTTGGTCAACAAGACTCTGGCATGCTAGCTAAAAGGTGTGCAGAGAATGATGAATCTGAATTGATAATGAATCTGTTGCAGGAAATCAAGGAAGGACAGAAAGTGGATTACGGAGTTCATGACTGGAATAACGTAATCCATTTTTTCTGTAAGAAGAGACTGATGAAAGATGCTGAGAAGGCTCTAAAAAAGATGATTAGCCTAGGCCACACCCCAAATGCACAAACTTTTCATTCTATGGTTACTGGATATGCCGCTATTGGAGGGAGCTATCTGGAGGTAACAGAGCTTTGGGGCGAGATGAAAGCTCTTGCTTCATCTGTCTCAATGAAGTTTGATCAAGAACTTTTGGATTCAGTGCTGTATACATTTGTGAGGGGTGGATTCTTCAATCGAGCCAATGAAGTTGTAGCAATGATGGAGAAAGCTAACATGTTTATTGACAAGTACAAATACCGAATGCTCTTCTTGAAGTACCATAAAACACTTTATAAAGGCAAGGCTTCGAAATTTCAGACAGAAGCCCAATTAAAGAAGAGGGAAGCAGCCCTGGCTTTTAAAAGATGGGTAGGTTTGAGTTGA 2202 0.3828 MGWKAAEKFIRHWKIFRGDNVSNHFVRYRFIVKFTSSFLPYTSSQAFLLELQNAFNPGRPCFSSMAETILIQARDPAKLNIEIQNAIDGNQLDDSWKLFQQHMQIEGFPRKSVVNKLLTAFVESLEVQWLEKAYGLVEQAIEESKQNLLEKEVLMYLCFGLAKAGLPVPASTVLRKLIDMEKFPPVTVWSAVLAHMSQTADGAYLAAELVLEISYLFQNNRVDPRKKSNSPLIAMKPDTTAFNMALAGCLLFNLTKKAEQLLDMMPRIGVKTDANLLIIMAHVYERNGRREELKKLQRHIEEAPNLTDIQLRQFYNCLLTCHLKFGDLDSTSNMVLEMLRKAKEAKNSLAAAKFMIDTTEIGHKYSPGLDSMRNLSVSKDSDSLKYIEPIRITGILQPTESIYVKLVKSFLEAGKTKDLAEFLIKVEREDSPLSNDSSVLVQVINSCILLGWLDQAHDLLDEMRLAGVKTGSSVYASLLKAYCQANRVADVNSLIRDARKAGIQLDSSSYKAMIQSRVVQEDTQGALRLFKEMKEAKIPKVGQQDSGMLAKRCAENDESELIMNLLQEIKEGQKVDYGVHDWNNVIHFFCKKRLMKDAEKALKKMISLGHTPNAQTFHSMVTGYAAIGGSYLEVTELWGEMKALASSVSMKFDQELLDSVLYTFVRGGFFNRANEVVAMMEKANMFIDKYKYRMLFLKYHKTLYKGKASKFQTEAQLKKREAALAFKRWVGLS 733
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Sto8g0625 733 Pfam Pentatricopeptide repeat domain 493 538 IPR002885 -
Sto8g0625 733 ProSiteProfiles Pentatricopeptide (PPR) repeat profile. 506 540 IPR002885 -
Sto8g0625 733 Pfam PPR repeat 443 468 IPR002885 -
Sto8g0625 733 Pfam PPR repeat family 580 625 IPR002885 -
Sto8g0625 733 ProSiteProfiles Pentatricopeptide (PPR) repeat profile. 471 505 IPR002885 -
Sto8g0625 733 TIGRFAM PPR: pentatricopeptide repeat domain 582 614 IPR002885 -
Sto8g0625 733 TIGRFAM PPR: pentatricopeptide repeat domain 474 506 IPR002885 -
Sto8g0625 733 Gene3D Tetratricopeptide repeat domain 75 368 IPR011990 GO:0005515
Sto8g0625 733 Gene3D Tetratricopeptide repeat domain 538 719 IPR011990 GO:0005515
Sto8g0625 733 PANTHER OS10G0422566 PROTEIN 393 732 - -
Sto8g0625 733 PANTHER OS10G0422566 PROTEIN 48 370 - -
Sto8g0625 733 Gene3D Tetratricopeptide repeat domain 369 537 IPR011990 GO:0005515
Sto8g0625 733 PANTHER BNAC05G43320D PROTEIN 393 732 - -
Sto8g0625 733 PANTHER BNAC05G43320D PROTEIN 48 370 - -
Sto8g0625 733 ProSiteProfiles Pentatricopeptide (PPR) repeat profile. 578 612 IPR002885 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Sto8g0625 Sto-Chr8 3833614 3836563 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Sto8g0625 398 649 Miscellaneous Gene Families AT4G11690 26.378 5.32e-17 82.8
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Sto8g0625 - - gmx:102661989 1053.89
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Sto8g0625 8 3833614 3836563 Sto8g0625 8 3833614 3836563 ECH