Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Sto8g0623 ATGGTCCTGATGATGGTCGTGGTGGCTAGTGTGTGGACTCAAAGCGCAGCTCAATCAGGTTGCACTAGCGCACTCACCAGCATGAGCTCGTGCTTGAACTACATCACGGGAAGTTCACCAACCCCATCGTCTACATGTTGCTCGCAGCTCTCGAGCGTGGTTCAATCCTCACCACAGTGCCTATGCTCTGTGCTTAATGGTGGTGGTTCCTCTTTAGGAATCACCATTAATCAAACCCTTGCTCTGTCTCTCCCCGGTGCTTGTAAAATACAGACTCCACCCGTCACCCAATGTCAAGGAGGTAATACTAATACACCCACCTCTTCTTCAACTGCTCCACTGGCTTCTCCCGCTGAATCACCTCAAGGATCTACCTCAGACATTCCTAATGCTGGTTCAGGCTCAGGCTCTAAAACAGTACCTTCAACCGACGGTGCCTCATCTCATGGAACCACCATCAAAATCTCCTCCCTTCTTTTCTTCATGTTGTTCCTCTCAGCTAGCAAAATGAGGCCAAAATGGGATAAGTTGGGTTTAATACTGGTCCTAGTGACTATGTTTCATCATGGGACTGAAGCACAATCAAGTTGCGCAGCCACACTGTTTGGTCTATCTCCTTGTCTAAGTTATGTCACAGGAAACTCCAcgactccatcttcttcttgctGCACCCAGCTTCTGAGTGTTGTTCAGTCACAACCACAGTGTCTTTGCCCAGCAGCACTTAGTGGAGGTGGTGCAATCTTGGGCTTCAACATTAACCAGACTCGAGCTACGTCACTCCCAGATGTTTGTTATATCAAAGCCCCACCATCATCTAGCCAGTGTGGTAATGGAAACGGACCTTCCACTTCAGCAACTAGTCCTCCTCCAACTACTGCCTCTCAGACAAGCATTCCTCAACCTTCAGATGCAGGAGCTGGGTCCAAAACACTGCCCTCAACAAACCAAAGATCATCTGATGGAAGCATCGAGAAAACACACGTTAAACTTAGTGTAGTTGCTATTTTTCTAGTTTTAAGCTTGCTTATGATCAAAATGTAA 1044 0.4646 MVLMMVVVASVWTQSAAQSGCTSALTSMSSCLNYITGSSPTPSSTCCSQLSSVVQSSPQCLCSVLNGGGSSLGITINQTLALSLPGACKIQTPPVTQCQGGNTNTPTSSSTAPLASPAESPQGSTSDIPNAGSGSGSKTVPSTDGASSHGTTIKISSLLFFMLFLSASKMRPKWDKLGLILVLVTMFHHGTEAQSSCAATLFGLSPCLSYVTGNSTTPSSSCCTQLLSVVQSQPQCLCPAALSGGGAILGFNINQTRATSLPDVCYIKAPPSSSQCGNGNGPSTSATSPPPTTASQTSIPQPSDAGAGSKTLPSTNQRSSDGSIEKTHVKLSVVAIFLVLSLLMIKM 347
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Sto8g0623 347 CDD AAI_LTSS 28 90 - -
Sto8g0623 347 Pfam Probable lipid transfer 188 273 IPR016140 -
Sto8g0623 347 Pfam Probable lipid transfer 2 98 IPR016140 -
Sto8g0623 347 MobiDBLite consensus disorder prediction 272 322 - -
Sto8g0623 347 SUPERFAMILY Bifunctional inhibitor/lipid-transfer protein/seed storage 2S albumin 196 274 IPR036312 -
Sto8g0623 347 PRINTS Plant phospholipid transfer protein signature 196 212 IPR000528 GO:0006869|GO:0008289
Sto8g0623 347 PRINTS Plant phospholipid transfer protein signature 217 231 IPR000528 GO:0006869|GO:0008289
Sto8g0623 347 PRINTS Plant phospholipid transfer protein signature 252 269 IPR000528 GO:0006869|GO:0008289
Sto8g0623 347 MobiDBLite consensus disorder prediction 272 323 - -
Sto8g0623 347 PANTHER BIFUNCTIONAL INHIBITOR/LIPID-TRANSFER PROTEIN/SEED STORAGE 2S ALBUMIN SUPERFAMILY PROTEIN-RELATED 176 339 IPR043325 -
Sto8g0623 347 PANTHER BIFUNCTIONAL INHIBITOR/LIPID-TRANSFER PROTEIN/SEED STORAGE 2S ALBUMIN SUPERFAMILY PROTEIN-RELATED 3 167 IPR043325 -
Sto8g0623 347 PANTHER NON-SPECIFIC LIPID TRANSFER PROTEIN GPI-ANCHORED 2-LIKE ISOFORM X1 3 167 - -
Sto8g0623 347 PANTHER NON-SPECIFIC LIPID TRANSFER PROTEIN GPI-ANCHORED 2-LIKE ISOFORM X1 176 339 - -
Sto8g0623 347 Gene3D - 194 273 IPR036312 -
Sto8g0623 347 Gene3D - 18 96 IPR036312 -
Sto8g0623 347 SMART aai_6 21 98 IPR016140 -
Sto8g0623 347 SMART aai_6 197 276 IPR016140 -
Sto8g0623 347 MobiDBLite consensus disorder prediction 95 149 - -
Sto8g0623 347 CDD AAI_LTSS 204 265 - -
Sto8g0623 347 SUPERFAMILY Bifunctional inhibitor/lipid-transfer protein/seed storage 2S albumin 20 99 IPR036312 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Sto8g0623 Sto-Chr8 3827269 3829854 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Sto8g0623 176 345 Lipid Metabolism Gene Families AT3G22600 41.573 1.46e-28 107
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Sto8g0623 - - qlo:115971871 224.942
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Sto8g0623 8 3827269 3829854 Sto8g0623 8 3827269 3829854 ECH