Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Sto8g0621 ATGTCTGGATTGATTGAAGGACTTCCTGACGCAGTTGCTATGAGGTGCCTTGCACGGGTTCCCTTTTACCTCCACCCAAAGCTAGAGCTTGTTTCGCACTCTTGGCGAGCAGCCATTCGTAGTCCTGAACTTTTTAAAGCTCGACAGGAGGTTGGTTCATCTGAGGATCTATTATGTGTCTGTGCTTTTGATCCAGAGAACCTATGGCAATTGCATGATCCTCTACGCGATCTCTGGATTACACTTCCTGTTCTTCCTTCAAAAATTAGACACCTTTCCCACTTTGGTGCTGTGTCGGTTGCTGGAAAGTTATTTGTGATTGGTGGTGGAAGTGATGCTGTTGATCCATTGACTGGTGATCAAGATGGTAATTTTGCAACAAATGAAGTCTGGTCATATGACCCTGTTGTTCGGCAGTGGGCTCCACGTGCACCAATGCTTGTTCCCCGTGCTATGTTTGCATGTTGTGTTTTGAATGGAAAGATAGTTGTGGCTGGGGGCTTCACTAGCTGTAGAAAATCAATTTCTCAAGCAGAAATGTATGACCCTGAAAACGATGTGTGGATTCAAATGCCGGACTTGCATCGCACCCATGACTCAGCTTGTAAAGGACTAGTTATTGGAGGAAAGGTGCACGTATTGCACAAGGGGTTGTCAACAGTGCAGATTTTAGACAATGCAGGGCCTTGTGGGTGGATTGTTGAGGAATGTGAGTGGGTCCAAGGTCCGATGGCAGTGGTTGGAGGCGCTCTTTATGTGATGAGCCATGGATTTATTATCAAACAGGAGAAAGAAGTGAACAAGATCGTAGGTTCAGCATCTGACTTTCGAAGGAGAATTGGGTTTGGAATGATTGGAGTGGGTGATGATTTATACGTGATTGGAGGGTTCATTGGCCCTGACAGGTGGAACTGGGATATTAAGCCAATGGCTGATGTTGATGTTCTCACACTTGGGAGTGAGAGACCAACCTGGCGCCAAGCAGCTCCAATGTCTCGGTGTCGCGGTACTATCCTTGGTTGTACAATGCTGAGAATTTAG 1041 0.464 MSGLIEGLPDAVAMRCLARVPFYLHPKLELVSHSWRAAIRSPELFKARQEVGSSEDLLCVCAFDPENLWQLHDPLRDLWITLPVLPSKIRHLSHFGAVSVAGKLFVIGGGSDAVDPLTGDQDGNFATNEVWSYDPVVRQWAPRAPMLVPRAMFACCVLNGKIVVAGGFTSCRKSISQAEMYDPENDVWIQMPDLHRTHDSACKGLVIGGKVHVLHKGLSTVQILDNAGPCGWIVEECEWVQGPMAVVGGALYVMSHGFIIKQEKEVNKIVGSASDFRRRIGFGMIGVGDDLYVIGGFIGPDRWNWDIKPMADVDVLTLGSERPTWRQAAPMSRCRGTILGCTMLRI 346
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Sto8g0621 346 PANTHER F-BOX/KELCH-REPEAT PROTEIN SKIP30 2 346 - -
Sto8g0621 346 SMART kelc_smart 290 345 IPR006652 GO:0005515
Sto8g0621 346 SMART kelc_smart 161 209 IPR006652 GO:0005515
Sto8g0621 346 SMART kelc_smart 103 160 IPR006652 GO:0005515
Sto8g0621 346 Pfam Kelch motif 149 194 IPR006652 GO:0005515
Sto8g0621 346 Pfam Kelch motif 278 332 IPR006652 GO:0005515
Sto8g0621 346 Pfam Kelch motif 92 146 IPR006652 GO:0005515
Sto8g0621 346 Gene3D - 59 344 IPR015915 GO:0005515
Sto8g0621 346 SUPERFAMILY Kelch motif 61 335 IPR015915 GO:0005515
Sto8g0621 346 SMART fbox_2 8 48 IPR001810 GO:0005515
Sto8g0621 346 PANTHER F-BOX/KELCH-REPEAT PROTEIN SKIP4 2 346 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Sto8g0621 Sto-Chr8 3820910 3821950 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Sto8g0621 8 204 Miscellaneous Gene Families AT4G33900 29.808 4.40e-17 79.7
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Sto8g0621 - - gmx:100800954 632.484
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Sto8g0621 8 3820910 3821950 Sto8g0621 8 3820910 3821950 ECH