Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Sto8g0620 ATGGAAGAGGGGGAAGCTAACAGAGATGCCGAAGTGGCTCCGGCACTGATTGCGGTTCATCCACACCAAAAATCTGTTGCCGTCGCTGTTGGCCCCTACTTGCGGGTATTCGACCTTCATGCTGATTCTGCGTCTTCTTTGATTGATGACTCCGGTGGGCCATTTCATAAAGATTCTATTAGAGCTATTCGGTTTGGTGCAAGGGGGAAGCTCTTTGTGTCTGCTGGAGATGATAAATCTGTCAAGATATGGTCTGCTGAATCTTGGCGGTGCATCTGTACTGTGTCCTCAGAAAAGAGAGTTAGTGCAGTCGCTATAAGCAATGATGGTTCTTATGTGTGTTTTGCTGACAAATTCGGTGTTGTCTGGATTGTGGATCTGACTGGATATGATGGAAACCAACAATTAAGTGATAAAAATGCGACACCACTTCTTTCTCACTATTGTAGTATCATCACTAATTTGGAATTTTCACCTGATGGTAGGTTCATTGTTAGTTCTGATCGGGATTTCAAAATCCGTGTAAGCTATCTTATATTCCCGCTGAATGTGAATTATCCATTTAGGTTTGTTTCCTGCCTTGCTTTTGTTCATGATCAGGAATGCCCTCAAGGCCTTCTCGTCTCTGGAAGTGGTGATTCAACAGTCCGTTTGTGGGATACCTCCTCTGGAGCACTTCTAGATACCTGTGATGTTGCAATTAAGGCAGGACTTTTAGAGTCTTATGGTAAAGCAGAGGAGTATGACCATGCTGTGACTGACCTATGCACCACCCTGGATGGATCGCTTGTTGCAGTGGCTCTTCAGAGGCAAGCCCTCACTTTCCTCATGTTCTTGCAAGGGATAGTATTGCTGAGGTGTAACCTTTCGACTCGAACACTTTCTGTTGCCAAGGTCGTTCCAATTGTAGGCGAGGCCTTTGTCCCTACCAGCCTGGGAAGCAGCTCCTCTGCTGGCATGTTGTGGATGGTAACAGGTGTCTCTAGTTTACCTGGTTCTAGTTATCCTGCTTTGGCTCGTGTCCGAGTAATTTCTGGTTTTGATGTTGAGCAAGTTCCAGCTGTTGTGGAAGATGATAAGATACCTGGGGGCGAGAAACTGCTAGAGACGTTGCAGGGAAGCATTTCTATTGATGAGAATGCTTTCTTGGCTGCTGCTGAAGCTGTCAAAGCAGCAATGTGCAATCTGTTAATTAAGAAGCAATACCCTTTTGAGAATAGAGAATCCAAGAAGAGAATTAGAAATGATAGAAAACtttaa 1260 0.4476 MEEGEANRDAEVAPALIAVHPHQKSVAVAVGPYLRVFDLHADSASSLIDDSGGPFHKDSIRAIRFGARGKLFVSAGDDKSVKIWSAESWRCICTVSSEKRVSAVAISNDGSYVCFADKFGVVWIVDLTGYDGNQQLSDKNATPLLSHYCSIITNLEFSPDGRFIVSSDRDFKIRVSYLIFPLNVNYPFRFVSCLAFVHDQECPQGLLVSGSGDSTVRLWDTSSGALLDTCDVAIKAGLLESYGKAEEYDHAVTDLCTTLDGSLVAVALQRQALTFLMFLQGIVLLRCNLSTRTLSVAKVVPIVGEAFVPTSLGSSSSAGMLWMVTGVSSLPGSSYPALARVRVISGFDVEQVPAVVEDDKIPGGEKLLETLQGSISIDENAFLAAAEAVKAAMCNLLIKKQYPFENRESKKRIRNDRKL 419
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Sto8g0620 419 Gene3D - 15 97 IPR015943 GO:0005515
Sto8g0620 419 Gene3D - 98 178 IPR015943 GO:0005515
Sto8g0620 419 Pfam WD domain, G-beta repeat 146 175 IPR001680 GO:0005515
Sto8g0620 419 Pfam WD domain, G-beta repeat 56 85 IPR001680 GO:0005515
Sto8g0620 419 Pfam WD domain, G-beta repeat 191 220 IPR001680 GO:0005515
Sto8g0620 419 SUPERFAMILY WD40 repeat-like 16 271 IPR036322 GO:0005515
Sto8g0620 419 ProSitePatterns Trp-Asp (WD) repeats signature. 207 221 IPR019775 -
Sto8g0620 419 SMART WD40_4 88 126 IPR001680 GO:0005515
Sto8g0620 419 SMART WD40_4 142 177 IPR001680 GO:0005515
Sto8g0620 419 SMART WD40_4 181 220 IPR001680 GO:0005515
Sto8g0620 419 SMART WD40_4 40 85 IPR001680 GO:0005515
Sto8g0620 419 ProSiteProfiles Trp-Asp (WD) repeats circular profile. 53 88 - -
Sto8g0620 419 PANTHER WD40 REPEAT PROTEIN 4 15 418 IPR028884 GO:0036265
Sto8g0620 419 ProSiteProfiles Trp-Asp (WD) repeats profile. 206 229 IPR001680 GO:0005515
Sto8g0620 419 Gene3D - 188 326 IPR015943 GO:0005515
Sto8g0620 419 ProSiteProfiles Trp-Asp (WD) repeats profile. 56 94 IPR001680 GO:0005515
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Sto8g0620 Sto-Chr8 3817173 3820151 Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Sto8g0620 K15443 - gmx:100809122 565.459
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Sto8g0620 8 3817173 3820151 Sto8g0620 8 3817173 3820151 ECH