Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Sto8g0604 ATGGAAGCAGACTTCACTCGACACCTCTCGCTTCTTCCGCATCCCTTTCATCCACCATTCAGGCAAGCTTCAATCACCTACCAATTCCCTAACTCTATtATAGCTGGTGTGAAAAGTCCTACTTGGCGTGAAAATGGGCATGCTAATTCCAACGCATTTGATGGCTGCCAGGGGGAGATCAATTGGAATGATCTTGATACTGATCTTTATCACTGGACAAAGGCCATACGGCCTGTGCAGTGGTTTCCTGGTCATATTGCGAAAGCAGAAAAAGAACTTAAAGAGCAGCTCAAATTGATGGATGTTGTGATAGAGGTGAGGGATGCTCGAATTCCCATGTCCACGGGTCATCCACAGGCAAATATTCTTGCCTGTAGTTTCTTCTCTATTATGGATCTATGGCTCGGGAATAGAAAGAGAATTCTGGTTTTAAATAGAGAAGACATGATATCAACTGCAGACCGCAATGCTTGGGCAGCACATTTTGCTGGGCAAGGCATTAAGGTTGTCTTCTCCAATGGACAACTTGGAATGGGCACAATGAAGCTAAGCCGGTTAGCAAAGACATTAGCAGCTGATGTAAATATCAAACGTAGAGCCAAAGGACTACTCCCTCGTCCGGTTCGAGCTGGAATAGTTGGATACCCTAATGTTGGAAAATCATCTTTGATTAACCGTTTGTTAAAGCGAAGAATGTGTCCAGCAGCTCCCAGGCCGGGTATAACTAGAGAATTGAGGTGGGTTCGCTTTGGGAAAGATCTTGAATTGTTAGACTCTCCTGGGATTCTCCCTATGCGAATCAGTGATCAGACAGCAGCTATAAAACTTGCCATATGTGATGACATTGGAGAGAGATCCTATGATGTTGCTGATGTTGCTGCAATTCTTGtacagatgcttaccaaactcCCTGTCGTAGGTGTAGATGCTCTTCGCAATCGGTACAAGATTGATGTAGATGGTCGTTCTGGTAAAATATTTGTAGAAAAGGTTGCACTTAATCTATTTAATGGTGATGTTCATCAAGCAGCATTCCGCATCCTTTCAGATTTTCGTAAAGGCAAGTTTGGCTGGACTGCATTGGAGAGACCTCCTAGGCCGCTGAAGGTGGAGGTTTGA 1119 0.4361 MEADFTRHLSLLPHPFHPPFRQASITYQFPNSIIAGVKSPTWRENGHANSNAFDGCQGEINWNDLDTDLYHWTKAIRPVQWFPGHIAKAEKELKEQLKLMDVVIEVRDARIPMSTGHPQANILACSFFSIMDLWLGNRKRILVLNREDMISTADRNAWAAHFAGQGIKVVFSNGQLGMGTMKLSRLAKTLAADVNIKRRAKGLLPRPVRAGIVGYPNVGKSSLINRLLKRRMCPAAPRPGITRELRWVRFGKDLELLDSPGILPMRISDQTAAIKLAICDDIGERSYDVADVAAILVQMLTKLPVVGVDALRNRYKIDVDGRSGKIFVEKVALNLFNGDVHQAAFRILSDFRKGKFGWTALERPPRPLKVEV 372
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Sto8g0604 372 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 85 325 IPR027417 -
Sto8g0604 372 Gene3D - 79 263 IPR027417 -
Sto8g0604 372 PANTHER DAR GTPASE 3, CHLOROPLASTIC 42 367 - -
Sto8g0604 372 PANTHER MITOCHONDRIAL RIBOSOME-ASSOCIATED GTPASE 1 42 367 - -
Sto8g0604 372 CDD YlqF 81 263 - -
Sto8g0604 372 PRINTS GTP1/OBG GTP-binding protein family signature 210 230 IPR006073 GO:0005525
Sto8g0604 372 PRINTS GTP1/OBG GTP-binding protein family signature 256 271 IPR006073 GO:0005525
Sto8g0604 372 TIGRFAM GTPase_YlqF: ribosome biogenesis GTP-binding protein YlqF 79 362 IPR019991 -
Sto8g0604 372 Gene3D - 268 356 IPR023179 -
Sto8g0604 372 Pfam 50S ribosome-binding GTPase 210 280 IPR006073 GO:0005525
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Sto8g0604 Sto-Chr8 3683165 3686735 Dispersed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Sto8g0604 K19828 - gmx:100784201 556.599