Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Sto8g0597 ATGGCAGTTCACTCCGCCGTGCCCGGTCGTTCTGGAGTTCGAGTCGCCGTCGTTGGTGACAAAGGTACCGGAAAATCGAGTTTGATAGCTGCGGCGGCGTCCGAGTCCTTCCCCGACGCTGTACCACCTGTTCTTCCGCCCACTTTATTGCCTGCTGATTGGTTCCCCGATCTCGTGCCTCTTACCATCATTGACACATCTTCCAGCTTGGAAAAGCTGAGCAAGCGCAATGAGGAATTGAAGCAAGCTGATGTGGTGGTTTTAACGTACGCCTGTGATGATCCCACAAGCCTCACGCGCCTGACTACTTACTGGGTTCGTGAATTGGAGGAGTTGGAGGTGAAGGCTCCTGTAATTGTGGTTGGTTGCAAGCTAGATCTACGGGATGAAAACCAGCAAATGAGCTTAGAAAATCTTATGACACAGCTCCTACAACAGTTTGGGGAAATTGTCACCTGCATGGAGTGCTCTGCAGCCACGCTATATCAGGAAGTTTTTTATTTTGCTCAAAAAGCAGTACTGCATCCAATAGACCCACTGTTTGATCAGGAAAAGCAAGCTTTAACAGATAAATGTTTAAGAGCATTGAGAAGAATATTTGTTCTTGGTGATAAAGACATGGACGATGCCCTAAATGATGCAGAACTAAATGCGTTTCAGATCAAGTGTTTTGATACACCATTACAGCCATCTGAAATAGCAGGAGTCAAAGCTGTTGTTCAACAGAAAGTACCTGAGGGAGTAAACCAGCTTGGTCTTACTTTTCCAGGCTTTATTTATATCCATAATATGTTCTTGAAGAAGGGGCGTCCTGAGACAATATGGGCTGTTCTAAGAAAATATGgatataataatgatttaaaacTCCAGGATGATTTCCTTCCAGTTCCATCTAAGAATGCTTCTGATCAGAGTTTGGAGCTGACAAGTGAAGCTGTAGAGTTTCTGAATGGTATCTTCCGATTGTTAGATTCGGATAGAGACCGAGCCCTACGACCTGCAGAGCTGGATAGACTATTTTCTACTGCTCCAGAAAGTCCATGGAATGATGCTCCATATAAGGATGCTGCTGAGAGAACTGATGCAGGTTACTTGACTCTTAGTGGATTTGTGTCTCAGTGGGCCCTCATGACATTACTTGATCCACCATGTAGCTTGGCTAATTTGATTTACATTGGATATAGTGGAAACCCTGCTGCAGCACTCCGTGTTACTCGTAGAAGATCTGTTGATCGTAAGAAGCAAACCACAGAAAGAAATGTTTTCCAATGCTATGTCTTTGGTTCAAAAAACGCTGGGAAATCTACTCTAttgtattcatttttaaaaagGCCTTTCTCAGATAATTATACTCCAACAACAGTTGAGCAATATGCTGCAAATGTTGTTGAATTAATTGGGGGGACTAAGAAAACTCTTGTATTACGGGAGATACCAGAGGATGAAGTAAAGAAATTTTTGTCAAATAGGGATTGTTTAGCTGCGTGTGATGTAGCTGTTTTTGTGTATGACAGTTCAGATGAACATTCATGGAAAAGATCGAGACAATTACTTGAGGAGGTTTCTAGACAAGGAGAATTAACCGGTTATAAAGTTCCTTGCCTCCTCATTGCTGCTAAGGATGACTTAACTCCATACCCGAGGGCAGTACAAGATTCAGTTAAGGTTACTGAGGAATTAGGGATAGAGGCTCCTATCCACGTTAGTCTGAAATTGGGTGATTCAAGTAACGTGTATGATAAGATTATTAGTGCTGCAGAACACCCTCATTTGAGCATTCCTGAAACTGAGATtgggaagaaaagaaagttataccATCAGTTTCTCCATCACTCTCTTATCTTTGCATCAGTTGGGGCAGCCATGACAGTTGTTGGTTTAGCAGCTTTTCGTGCATACGCAGTTAAGAAAAATTCTGCTTAG 1923 0.4186 MAVHSAVPGRSGVRVAVVGDKGTGKSSLIAAAASESFPDAVPPVLPPTLLPADWFPDLVPLTIIDTSSSLEKLSKRNEELKQADVVVLTYACDDPTSLTRLTTYWVRELEELEVKAPVIVVGCKLDLRDENQQMSLENLMTQLLQQFGEIVTCMECSAATLYQEVFYFAQKAVLHPIDPLFDQEKQALTDKCLRALRRIFVLGDKDMDDALNDAELNAFQIKCFDTPLQPSEIAGVKAVVQQKVPEGVNQLGLTFPGFIYIHNMFLKKGRPETIWAVLRKYGYNNDLKLQDDFLPVPSKNASDQSLELTSEAVEFLNGIFRLLDSDRDRALRPAELDRLFSTAPESPWNDAPYKDAAERTDAGYLTLSGFVSQWALMTLLDPPCSLANLIYIGYSGNPAAALRVTRRRSVDRKKQTTERNVFQCYVFGSKNAGKSTLLYSFLKRPFSDNYTPTTVEQYAANVVELIGGTKKTLVLREIPEDEVKKFLSNRDCLAACDVAVFVYDSSDEHSWKRSRQLLEEVSRQGELTGYKVPCLLIAAKDDLTPYPRAVQDSVKVTEELGIEAPIHVSLKLGDSSNVYDKIISAAEHPHLSIPETEIGKKRKLYHQFLHHSLIFASVGAAMTVVGLAAFRAYAVKKNSA 640
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Sto8g0597 640 ProSiteProfiles Miro domain profile. 10 175 IPR020860 GO:0003924|GO:0005525
Sto8g0597 640 PANTHER RHO FAMILY GTPASE 4 493 IPR003578 GO:0005525|GO:0007264
Sto8g0597 640 PANTHER MITOCHONDRIAL RHO GTPASE 4 493 - -
Sto8g0597 640 SMART rho_sub_3 15 176 IPR001806 GO:0003924|GO:0005525
Sto8g0597 640 PRINTS Transforming protein P21 ras signature 422 443 - -
Sto8g0597 640 PRINTS Transforming protein P21 ras signature 445 461 - -
Sto8g0597 640 PRINTS Transforming protein P21 ras signature 530 543 - -
Sto8g0597 640 ProSiteProfiles small GTPase Rab1 family profile. 417 639 - -
Sto8g0597 640 PIRSF Miro 9 640 IPR021181 GO:0003924|GO:0005509|GO:0005525|GO:0007005|GO:0031307
Sto8g0597 640 Pfam EF hand associated 226 311 IPR013567 -
Sto8g0597 640 ProSiteProfiles Miro domain profile. 419 588 IPR020860 GO:0003924|GO:0005525
Sto8g0597 640 Pfam Ras family 426 551 IPR001806 GO:0003924|GO:0005525
Sto8g0597 640 Pfam Ras family 15 167 IPR001806 GO:0003924|GO:0005525
Sto8g0597 640 Pfam EF hand associated 348 415 IPR013566 -
Sto8g0597 640 Gene3D - 289 479 - -
Sto8g0597 640 Coils Coil 63 83 - -
Sto8g0597 640 SMART rab_sub_5 13 176 - -
Sto8g0597 640 Gene3D - 10 178 IPR027417 -
Sto8g0597 640 SUPERFAMILY EF-hand 175 375 IPR011992 -
Sto8g0597 640 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 418 592 IPR027417 -
Sto8g0597 640 Gene3D - 183 287 - -
Sto8g0597 640 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 13 208 IPR027417 -
Sto8g0597 640 CDD Miro2 418 600 - -
Sto8g0597 640 Gene3D - 485 586 IPR027417 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Sto8g0597 Sto-Chr8 3650952 3657138 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Sto8g0597 1 639 EF-hand Containing Proteins AT3G63150 60.374 0.0 819
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Sto8g0597 K07870 - gmx:100803790 1015.37