Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Sto8g0586 atGAAAAACGGTTCGTTTCCCTCGTTAGGTAGGGCTAGGGAGTATTTGGAACGCAGTCGTTTCATCTCCGCTTCCGCCTTCTCTATTAGGGGTGTTCGTCGGTTCGGTTTGAGCGGGACTAGGGAGTATTTCAAACGCCGTCGTTTCATTGCCCTGAGGCTGAGAGTCTTAATCTTCGTCTCTCCCGCCTCTGTGCGACTTGGTGTCGTAGCTTCAAGGTTTAGCTCGTCTTCACTCTTCTCCTTGCCTGTAACCATGAAGCTCGTCAGGTTTTTGATGAAGTTGAACAACGAGACCGTATCAATCGAGCTTAAGAACGGTACTGTTGTTCACGAAACCATTACAGGAATGTTCAGTAATTATATTGCAATTTTTTGCAACATTCTCAGAATGCTACAAACTGAACCATCCTCATCCATTGCCTTTGATCAATCCCCAACCCCAGCCTGCTTTAGATGCTGGCATGTCAGTAGCTCAGGTGTGGATATTAGTATGAATACACATTTGAAGACAGTCAAACTGACATTGAAAGGGAAAAACCCGGTGACTTTGGATCATCTCAGTGTGAGGGGTAACAACATCCGCTATTATATCCTTCCTGACAGCTTGAATCTTGAAACTTTACTGGTTGAAGAAACACCTAGAGTCAAGCCCAAAAAGCCAACTGCTGGGGAAGGGGCCGAGGGCGGGGACGTTGTCGAGGCCGGGGCCGTTGAGTTTCTCGTTGACAATCTCTGTTTTGGCATCAAATGA 753 0.4675 MKNGSFPSLGRAREYLERSRFISASAFSIRGVRRFGLSGTREYFKRRRFIALRLRVLIFVSPASVRLGVVASRFSSSSLFSLPVTMKLVRFLMKLNNETVSIELKNGTVVHETITGMFSNYIAIFCNILRMLQTEPSSSIAFDQSPTPACFRCWHVSSSGVDISMNTHLKTVKLTLKGKNPVTLDHLSVRGNNIRYYILPDSLNLETLLVEETPRVKPKKPTAGEGAEGGDVVEAGAVEFLVDNLCFGIK 250
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Sto8g0586 250 CDD Sm_D1 87 222 IPR034102 GO:0000387
Sto8g0586 250 Gene3D - 82 214 - -
Sto8g0586 250 PANTHER SMALL NUCLEAR RIBONUCLEOPROTEIN SM D1 155 226 - -
Sto8g0586 250 PANTHER SMALL NUCLEAR RIBONUCLEOPROTEIN SM D1 86 117 - -
Sto8g0586 250 SUPERFAMILY Sm-like ribonucleoproteins 160 226 IPR010920 -
Sto8g0586 250 Pfam LSM domain 160 198 IPR001163 -
Sto8g0586 250 PANTHER SMALL NUCLEAR RIBONUCLEOPROTEIN SM 86 117 IPR027141 GO:0006396
Sto8g0586 250 PANTHER SMALL NUCLEAR RIBONUCLEOPROTEIN SM 155 226 IPR027141 GO:0006396
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Sto8g0586 Sto-Chr8 3593905 3597401 Dispersed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Sto8g0586 K11087 - egr:104457017 162.54
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Sto8g0586 8 3593905 3597401 Sto8g0586 8 3593905 3597401 ECH