Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Sto8g0579 ATGCTACCACTGATGAGCTTGAGGCTTGGTCGGACATCGACGACGCCGTTTTCTCCGGACATCATCGTATACGACGCCGATGATGTTGAGTTCGGCACGCTTTGGTGGTTCGTTTATGCTGGGATTTCTTGCTTTCTTGTCCTCTTCGCTGGGATCATGTCTGGTCTCACCCTCGGACTGATGTCTCTAGGTCTGGTTGATCTCGAAATTCTCCAGCGTAGTGGCACATCCACAGAGAAAAAGCAAGCTGCTGCTATTCTACCAGTTGTTCAGAAACAACACCAGCTGCTCGTTACTTTGCTTCTTTGCAATGCTTGTGCCATGGAGGCTCTTCCTATTTACCTTGATAAAATTTTCCATCCTTTTGTAGCCGTACTGTTGTCCGTAACCTTTGTTCTTGCTTTTGGAGAGGTTATCCCACAAGCAATATGCTCAAGATTTGGGCTTTATGTTGGTGCAAATTTTGTGTGGTTGGTGCATATTCTGATGATAATTTGTTATCCAATTGCTTACCCTATTGGAAAGGTTCTGGATGCTGTACTTGGACACAATGATGCATTATTTAGGCGAGCACAATTGAAAGCACTTGTTTCCATCCATAGTCTAGAGGCTGGCAAAGGGGGTGAATTGACACATGATGAGACAACAATTATCAGTGGAGCATTAGATCTTACTGAAAAGACTGCAAAGGAAGCTATGACACCAATTGAATCCACGTTTTCCTTGGATGTTGATTCCAAATTGGACTGGGAAGCAATGGGGAAAATTCTTGCAAGAGGTCATAGCCGTGTCCCTGTTTTTAGTGGGAGCcccaaaaatataattggcCTCTTACTAGTAAAAAATCTTCTGACTGTAAGAGCTGAAACAGAAACCCCAGTTAGTGCTGTTTCCATCAGAAGAATTCCTAGGGTTCCATCAGACATGCCTCTGTACGATATCCTCAATGAGTTTCAGAAAGGAAGCAGCCATATGGCAGCCGTAGTTAAAACGAAGAAGGAGAGTAATACTAACAACATTCATgctagtggtggtggtggtgacaATGGGAAATGTAACGAAGGCAAAGTCAAAAATAACAATTCAGAGCTAACTAAGCCATTGCTAAGCGAGTCTCTTGAGAAAGCAGCAGAAAATGTTGTAGTTACGATTGATAAACCGCCCAAGGTTGCAAACAAGCAACAAAATGGTGCTACAACATATTGTGTCCACCACTTGTCAGATAATGTTGAAGATGGGGAAGTTATAGGCATCATAACCTTGGAAGATGTTTTTGAAGAACTCCTCCAGGAAGAAATAGTAGATGAGACAGATGTGTATATTGATGTACACAGAAGAATACGTgtagctgctgctgctgctgcttcaTCTGTGGCACGAGCTCCTTCATCTCGAAAGTTGGCAGGTCACAAAACTGGAGTTTTGGCAGGAAGGATGAGTCTTTCTAAACTTTGGAGTGAATATTTCCCGATCATGGGTTTCAATTCGGTCTATAGATGCTTGCAGGACATATTTCCACAGGTTGATGCCAGGATACTGAGGGCTGTTGCTATTGAACATCCTAAAGATGTTGACTTGGCTGCCGGAATTGTTATCACTGAAGTCATCCCTTTTATGTCTAAAAGATCCATGCCTTCAATTCCTGCACATGATAAGAGTCCTGGAGCTGTTATAAATGTAGAAGATGAGCGAAGGAATAGGTTGGAGCATGAACAACTAGTTGAAAAGACTGATGTTCCATGTTCTGTACctgttgaaaatataaaaaatgccaACTGTTCCAATGAGGAACAACATCTTTTGGGTAATGGTGGAGAAAACTTCACAGGAGAGGCCACAGATAAGATTACTGAGAATACAACAAATGGTTTGGCTGGTGGAAGTTTTGCTCATGAACTAGAACGTATGGATGTTGAGAGTGAAAATCTGTTTTCTTCTGTCATGTGCCAAGAGGTGGAACCTGAGCAGACTCCCCTTAACAGGCAGACTGCTTCCACAAACAATAGTAATGGAAAAGAGGTCGAAGATTTTGATGGTCCCGCAGctgatgataataatgatatttcttCTCCTATAAGCTACaggtttaaaaattatgaaactgCATTGGTTGAGGGAGAAAATTCTGTGGTCGAATCAGTTAATCAAGCTCAAAAGCATTTTCCAAATGCTAAAGAATGCAGTTTTCAATCAGAATTTGTTTGTGGCCCTTCTATTAGTGCCGATAAAAATCTGGAGAGtggttgttcattttttgaaCAAGAGGAGTCTGTGAATAAAGCTGGTGATGTTGAGGATGAGATTAGTGAGAACGATGTGGTTAGCGAGTCTAATCAGTTATGCAGGATTGATCTGCTTGAAAAGGTCATTGATGAAGCCAAAACTAATAAGAGATCCTTGTTTACATCAATGGAATCTCTTATCAGCTTAATGAGAGAAGTGGAACTTCTGGAGAAAGCTGCAGAACAAGCCAAAATGGAAGCTGCTCTTGGAGGAGAGGAAATTTTGGTTAGAGTGGAAGAGTTAAAAGAGATGTTGGTGCATGCAAAAGAAGCAAATGACATGCATGCAGGAGAAGTTTATGGAGAAAAGGCAATTTTAGCAACTGAAATGAAGGAACTTCAATCCCGCTTACTCAGCTTGTCAGATGAAAGGGATAATTCACTAGCAATTCTTGATGAGATGAGCCAAACTCTTGAAGTTCGACTAGCTGCAGCAGAAGAGATGAGGAAAGCAGCTGAGCAGGAAAAGCTGGAAAAAGAGGAATCTGCAAGAAAGGCTCTTGTTGAACAGGAAGCAATCATGGAGAAGGTGGTTCAAGAGTCAACAAAACTACAGCTGGAGGCAGAAGAGAACTCAAAGTTACGTGAGTTCCTGATTGACCGTGGGAGGGTTGTTGATATGTTGCAAGGAgaaatttctgttatttgtCAGGATATCAGGCTTCTAAAAGAGAAATTTGATGCAAATCTTCCGTTGAGTAAATCCCTCACCTCAAGCCAGACTAGTTGTATCTTAGCATCATCAGGTTCATCCCACAAAAGCTTGGCATCTGATATAGCTTCAGATCATGGTGATTTACCTGAAATACTCAAGACAAAACCAGTATCATTACTTGATGAACTGTCCTCCAAAAGTAGAAATGAAGAGGAAAGCAGCAAAAGTTTACAAAAAACCCTTCTTGATGATGGGTGGGATTATATCGTCGAGAATGATATAGATCTGAATTCTTGA 3234 0.3964 MLPLMSLRLGRTSTTPFSPDIIVYDADDVEFGTLWWFVYAGISCFLVLFAGIMSGLTLGLMSLGLVDLEILQRSGTSTEKKQAAAILPVVQKQHQLLVTLLLCNACAMEALPIYLDKIFHPFVAVLLSVTFVLAFGEVIPQAICSRFGLYVGANFVWLVHILMIICYPIAYPIGKVLDAVLGHNDALFRRAQLKALVSIHSLEAGKGGELTHDETTIISGALDLTEKTAKEAMTPIESTFSLDVDSKLDWEAMGKILARGHSRVPVFSGSPKNIIGLLLVKNLLTVRAETETPVSAVSIRRIPRVPSDMPLYDILNEFQKGSSHMAAVVKTKKESNTNNIHASGGGGDNGKCNEGKVKNNNSELTKPLLSESLEKAAENVVVTIDKPPKVANKQQNGATTYCVHHLSDNVEDGEVIGIITLEDVFEELLQEEIVDETDVYIDVHRRIRVAAAAAASSVARAPSSRKLAGHKTGVLAGRMSLSKLWSEYFPIMGFNSVYRCLQDIFPQVDARILRAVAIEHPKDVDLAAGIVITEVIPFMSKRSMPSIPAHDKSPGAVINVEDERRNRLEHEQLVEKTDVPCSVPVENIKNANCSNEEQHLLGNGGENFTGEATDKITENTTNGLAGGSFAHELERMDVESENLFSSVMCQEVEPEQTPLNRQTASTNNSNGKEVEDFDGPAADDNNDISSPISYRFKNYETALVEGENSVVESVNQAQKHFPNAKECSFQSEFVCGPSISADKNLESGCSFFEQEESVNKAGDVEDEISENDVVSESNQLCRIDLLEKVIDEAKTNKRSLFTSMESLISLMREVELLEKAAEQAKMEAALGGEEILVRVEELKEMLVHAKEANDMHAGEVYGEKAILATEMKELQSRLLSLSDERDNSLAILDEMSQTLEVRLAAAEEMRKAAEQEKLEKEESARKALVEQEAIMEKVVQESTKLQLEAEENSKLREFLIDRGRVVDMLQGEISVICQDIRLLKEKFDANLPLSKSLTSSQTSCILASSGSSHKSLASDIASDHGDLPEILKTKPVSLLDELSSKSRNEEESSKSLQKTLLDDGWDYIVENDIDLNS 1077
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Sto8g0579 1077 Coils Coil 1039 1059 - -
Sto8g0579 1077 ProSiteProfiles CNNM transmembrane domain profile. 32 214 IPR002550 -
Sto8g0579 1077 Pfam Cyclin M transmembrane N-terminal domain 42 209 IPR002550 -
Sto8g0579 1077 SUPERFAMILY CBS-domain pair 218 430 IPR046342 -
Sto8g0579 1077 Gene3D - 214 345 IPR046342 -
Sto8g0579 1077 Coils Coil 807 827 - -
Sto8g0579 1077 Coils Coil 896 931 - -
Sto8g0579 1077 CDD CBS_pair_CorC_HlyC_assoc 228 329 IPR044751 -
Sto8g0579 1077 PANTHER BNAC05G01850D PROTEIN 15 475 - -
Sto8g0579 1077 Coils Coil 864 884 - -
Sto8g0579 1077 MobiDBLite consensus disorder prediction 653 688 - -
Sto8g0579 1077 PANTHER ANCIENT CONSERVED DOMAIN PROTEIN-RELATED 15 475 IPR045095 GO:0010960
Sto8g0579 1077 Gene3D - 360 436 IPR046342 -
Sto8g0579 1077 MobiDBLite consensus disorder prediction 653 673 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Sto8g0579 Sto-Chr8 3544528 3554618 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Sto8g0579 K16302 - vvi:100259602 700.279
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Sto8g0579 8 3544528 3554618 Sto8g0579 8 3544528 3554618 ECH