Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Sto8g0573 ATGGCGAATCTTCTGCTATCATATTCAATACAAGCATGCTGTAAAAAAACAAAGGCCATTGAACAATCCCAGATATTACCCTCTAGTCAGTATCAATTTGGAAACAAACTGTCTTGCTTTGACAAATCAGATATAGGAAAAAAGCTAGCTAGTAGAGGAATGCAAAGCATCACTCTCCCTTTTAACCCGAATTTTACTTCAAAATTGCATGCAACGTCAAATATATctattgaggaaactgaacaagTCACCACTATTACTGAAGCTGAAGATCTAAGAAGGGCATGCACTTATTTGTTCAGGACAGAAAACAATGATCAGGTGAAAGTTtatgttaaaaagaaaaacttcaAATATTCTGTGTATGTTGAGATTCCATCCTTGCAACTTCATGGTAAAGGAGAAGGGTTGGTCTTGTGTTGGGCTATTTACAAATCCAATTCATCATCCTTCATTCATTCggatttaattaattcaactaAAGATGCCAGAACAGGGATGAATATTAGTGCATTTCCAGAGTCTTCTTTTGGAAACTTTGCAATTGAATTGGAATTTGATGCAAAACAAGTTCCCTTCTACTTCTCATTTTTCCTGAGATCATCATTAGATTCTGAGTCAAGTGGCTTGGAGATTCGAAGTCACAGGAAAACAAATTTTTGTGTACCTGTTGGCTCTCTACCAGGATGTCCAACTCCTCTTggtctctctttctctcccgATGGTTCTATAAACTTTGCCATTTTCTCTAGACACACAGAAGGTATGGTTTTATGCTTGTATGATGACACCAGTCCAGAGAAGCCTGCTTTAGAGCTTGATCTGGATCCTTGTGTCAATAGATCAGGTGACATCTGGCATATCTCATTTGAAAGTGCTAGTACTTTTGTAAGCTACAGCTACCGATGCAGAGGAGCTTTTGTGCAGAGAAACAGGGATGATAACTATACTGAGGATATTTTTCTGGATCCATATGCTAAGGTCACTGGGAATTCATATCCTAATGGTCTTGGATCAGGGTTTCTTCAGAAGTATCTTGGATGCTTGTACAAAGAAGCTGCTTTTGACTGGGGTAACGAGTTTCATTTAAATTTACCAATGGAAAAACTGGTGGTCTATAGGTTGAATGTTGAGCATTTTACACAGCACAAGTCCAGCCAACTACCAAGTGGTTTAGCTGGGACCTTCACTGGTTTGGCCAAAAAGCTCCAGCATTTTAAGGATCTTGGTGTCAATGCAGTTCTCTTGGAGCCAGTTTTCACATTTAATGAGCGAAAAGGACCATATTTCCCTCGTCACTTTTTTTCTCCAATGCACATTTATGGACCATCTAGTGATCCTGTATCTACTATCAACTCTTTAAAAGAGATGGTGAAAATTTTGCATGCAAATGGGATAGAAGTTCTAATGGAAGTTGTTTTCACCCATACTGCTGAGACTGGTGCACTTCAAGGAATTGATGACTTATCCTACTATTATGCAAATGGAGTTGGTGATCTGAAAACACGTAGTGCTTTGAATTGTAACTATCCTATAGTGCAACAACTGATTCTGGATAGCCTTCGGCATTGGGTGACTGAGTTTCACATTGATGGATTCTCTTTTATAAATGCTTCATATCTGTTGAGGGGATTTCATGGAGAATACTTGTCTCGGCCACCATTGGTTGAAGCAATTGCTTATGATCCATTACTCTCAAGGACCAAGATCATCGCAGATTGCTGGGATCCCTATGAAATGGTAACAAAGGAAACCCGTTTTCCTCATTGGATGAGATGGGCTGAAATGAATGCAAATTTTTGTAATGATGTGAAAAACTTTTTAAGGGGTGAAGGTCTTCTTAGCAACCTTGCTACAAGACTTTGTGGAAGTGGGGACATGTTTTCAGATGGACGGGGCCCTGCATTCTCATTCAATTTCATTTCCAAGAATTTTGGACTCTCCCTTgtggacatgctcagcttcagTAGTGGAAAGCTAGATGTAGAATCTAGTTGGAATTGTGAAGAAGGACCAACCAATAACTCCCTTGTCCTTGAGAGGAGTCTCAGACAAATCCGTAATTACCTCTTCATATTGTTTGTATCTTTAGGAGTACCTGTTCTGAACATGGGAGATGAGTGTGGTCACTCTGGAGGTTATGTTGACAGAAAACCGTTCGATTGGAATGCCATAAAAACAGGTTTTGGTGAACAAATCATGCCATTCATTTCGTTTTTAAGTTCATTAAGAAAGAGGCGAAGTGATATACTCGAGAATAGGAACTTCTTGAAAGAAGAGAACATTGAATGGTGTGGAATTAACCAGACTCCACCGAAATGGGAAGACCCGTCCTGCAAGTTCTTGGCTGTGATTTTGAAGGCTCGAAGAACGGATTTACCTGTCAGCTCTGAATCTTATGATTTATGGGGTGACTTATTTATTGCTTTCAATGCAGCTAATCATCCAGAAACTGTTGTTTTACCTCCACCTCCAGAAGGAACGTCATGGTGCCGATTGGTTGATACAGGTCTGCCATTTCCTGGGTTTTTCTCGACCAATGGTGAATTTGTGCGTGAGCAAACAGGGGGATTGCTTACTTATGAAATGAAGGCTCACAGCTGCACTTTTTTTGAGGCAATTCATCGTACCAGTTAA 2637 0.3838 MANLLLSYSIQACCKKTKAIEQSQILPSSQYQFGNKLSCFDKSDIGKKLASRGMQSITLPFNPNFTSKLHATSNISIEETEQVTTITEAEDLRRACTYLFRTENNDQVKVYVKKKNFKYSVYVEIPSLQLHGKGEGLVLCWAIYKSNSSSFIHSDLINSTKDARTGMNISAFPESSFGNFAIELEFDAKQVPFYFSFFLRSSLDSESSGLEIRSHRKTNFCVPVGSLPGCPTPLGLSFSPDGSINFAIFSRHTEGMVLCLYDDTSPEKPALELDLDPCVNRSGDIWHISFESASTFVSYSYRCRGAFVQRNRDDNYTEDIFLDPYAKVTGNSYPNGLGSGFLQKYLGCLYKEAAFDWGNEFHLNLPMEKLVVYRLNVEHFTQHKSSQLPSGLAGTFTGLAKKLQHFKDLGVNAVLLEPVFTFNERKGPYFPRHFFSPMHIYGPSSDPVSTINSLKEMVKILHANGIEVLMEVVFTHTAETGALQGIDDLSYYYANGVGDLKTRSALNCNYPIVQQLILDSLRHWVTEFHIDGFSFINASYLLRGFHGEYLSRPPLVEAIAYDPLLSRTKIIADCWDPYEMVTKETRFPHWMRWAEMNANFCNDVKNFLRGEGLLSNLATRLCGSGDMFSDGRGPAFSFNFISKNFGLSLVDMLSFSSGKLDVESSWNCEEGPTNNSLVLERSLRQIRNYLFILFVSLGVPVLNMGDECGHSGGYVDRKPFDWNAIKTGFGEQIMPFISFLSSLRKRRSDILENRNFLKEENIEWCGINQTPPKWEDPSCKFLAVILKARRTDLPVSSESYDLWGDLFIAFNAANHPETVVLPPPPEGTSWCRLVDTGLPFPGFFSTNGEFVREQTGGLLTYEMKAHSCTFFEAIHRTS 878
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Sto8g0573 878 Gene3D Glycosidases 350 759 - -
Sto8g0573 878 SUPERFAMILY (Trans)glycosidases 353 747 IPR017853 -
Sto8g0573 878 CDD E_set_GDE_Isoamylase_N 233 374 IPR044505 -
Sto8g0573 878 PANTHER ISOAMYLASE 2, CHLOROPLASTIC 69 875 - -
Sto8g0573 878 Gene3D - 760 878 IPR013780 -
Sto8g0573 878 Coils Coil 740 760 - -
Sto8g0573 878 Gene3D Immunoglobulins 221 337 IPR013783 -
Sto8g0573 878 SMART aamy 378 747 IPR006047 GO:0005975
Sto8g0573 878 Pfam Carbohydrate-binding module 48 (Isoamylase N-terminal domain) 233 326 IPR004193 GO:0004553|GO:0005975
Sto8g0573 878 PANTHER GLYCOGEN DEBRANCHING ENZYME 69 875 - -
Sto8g0573 878 SUPERFAMILY Glycosyl hydrolase domain 759 872 - -
Sto8g0573 878 Pfam Alpha amylase, catalytic domain 394 481 IPR006047 GO:0005975
Sto8g0573 878 SUPERFAMILY E set domains 228 359 IPR014756 -
Sto8g0573 878 CDD AmyAc_plant_IsoA 366 751 IPR044096 GO:0019156|GO:0019252
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Sto8g0573 Sto-Chr8 3508165 3510801 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Sto8g0573 1 878 Glycoside Hydrolase AT1G03310 53.949 0.0 930
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Sto8g0573 K01214 - gmx:100777953 1164.06
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Sto8g0573 8 3508165 3510801 Sto8g0573 8 3508165 3510801 ECH