Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Sto8g0569 ATGTTGTTCTTCTCCTACTTCAAGGACTTGGTGGGCAGGGAAGTAACCGTGGAGCTGAAGAACGATTTGGCGATTAGAGGAATATTGCATTCAGTGGACCAATACCTTAACATCAAGCTCGAGAACACTCGCGTCGTCGATCAAGACAAATACCCCCACATGATCACTATAAGTATATTTGATTGGGAAAgtgttgatacctccttcaaaatacttcaatttggaCTTTCTGTAAGGAACTGCTTCATAAGAGGGTCGGTGGTGAGGTATGTGCAATTACCTCCAGAAGGGGTGGACATTGAACTTTTACATGATGCCACAAGGAGAGAAGCTCGTGGTGGCTGA 345 0.4087 MLFFSYFKDLVGREVTVELKNDLAIRGILHSVDQYLNIKLENTRVVDQDKYPHMITISIFDWESVDTSFKILQFGLSVRNCFIRGSVVRYVQLPPEGVDIELLHDATRREARGG 114
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Sto8g0569 114 CDD LSm2 2 111 IPR016654 GO:0006397
Sto8g0569 114 PIRSF Lsm2 64 114 IPR016654 GO:0006397
Sto8g0569 114 PIRSF Lsm2 1 72 IPR016654 GO:0006397
Sto8g0569 114 SMART Sm3 5 93 IPR001163 -
Sto8g0569 114 PANTHER SNRNP CORE PROTEIN FAMILY MEMBER 1 112 IPR016654 GO:0006397
Sto8g0569 114 Pfam LSM domain 7 92 IPR001163 -
Sto8g0569 114 Gene3D - 1 113 - -
Sto8g0569 114 SUPERFAMILY Sm-like ribonucleoproteins 3 113 IPR010920 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Sto8g0569 Sto-Chr8 3486734 3489860 Transposed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Sto8g0569 K12621 - qsu:112008381 174.866
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Sto8g0569 8 3486734 3489860 Sto8g0569 8 3486734 3489860 ECH