Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Sto8g0554 ATGAAGAAAGGCAAGGGCAGGAACAACGGTTTGTTGCCCAATTCACTGAGGATTATCTCTTCCTGCCTCAAGACTGTGTCCACGAATGCTAGCACCGTTGCTTCCACTGTACGCTCTGCTGGCGCCTCCGTTGCTGCTTCCATTTCCTCTACTTCTGAGGATCACAAAGATCAGGTAACATGGGCTGGTTTTGATAGGCTAGAGCTTGAGCAGTCTGTCATTAAACATGTTCTTTTACTTGGTTATCTGAACGGATTTCAAGTTCTTGATGTGGAGGATGCCTCTGGCTTCAGTGAACTGGTCTCAAAGCGCGATGGTCCTGTTTCTTTCTTACAGATGCAGCCATTCCCTGTAGGCTCTGATGGCCAGGAGGGATTTAAAAAGTCACATCCTTTACTACTGGTTGTTGCTGGGGATGACACCAGCAGAAGAGATGGCAGCGTGGAGACTCAATCTGGGAACTGTGTCAACTCTGCAACAGCTGTTCGGTTTTACTCTCTGAAGTCTCATAGTTATGTTCATGTTCTGAGATTCCGATCCACAGTGTGTATGATCAGATGTAGTTCTCGAATCGTAGCTGTTGGTCTTGCTACTCAAATATATTGCTTCGATGCATTGACTCTTGAGAATAAATTTAGTGTGCTCACCTATCCTGTTCCTCAGCTAGCGGGACAAGGAACTACAAGTGTTAATGTTGGTTATGGTCCAATGGCTGTCGGTTCAAGGTGGTTAGCATACGCATCCAACAATCCACTGCCCTTAAATGTAGGCCGCTTGAGCCCACAAAACCTGAGTCCTTCTCCAGGGGTTAGTCCATCAACATCTCCAGGCAGTGGTAGTTTGGTTGCTCGTTATGCAATGGAGTCCAGCAAACATTTGGCTTCTGGAATAATCAAATACTGTCAAGAGCTGCTTCCCGATGGTTCTAGTTCTCCAGTACCATCAAATTCAGGCTGGAAAGTTGGTAGAGCTACAGGAATGGATACAGATAATGCGGGCATGGTTGTTGTGAAAGATTTAGTTTCCAGAGCTATCATCTCACAATTTAAAGCTCACACCAGTCCTATATCTGCACTATGTTTTGACCCAAGTGGGACCCTTCTGGTCACTGCATCAGTCTATGGGAATAACATTAATATCTTCCGGATAATGCCATCATGCACACGTAAAGGATCAGGTGTTCCGAGCTATGACTGGAGCTCTTCTCATGTGCATCTTTATAAACTTCATCGTGGAATAACATCAGCTATGATCCAGGACATTTGTTTTAGCCATTTTAGTCAGTGGATTGCAATTGTCTCGTCCAAGGGGACTTGTCATCTTTTTGTTTTGTCTCCATTTGGAGGTGATACTGGTTTCCGAATTATTAATTCTCAGGGTGAAGAACCGTCCTTACTTCCGGTTTTATCTCTACCTTGGTGGTCCTCTTCATATTCCATGTCCGGCCAGCAACCTTCGCCTCCTCCAGCACCTGCTGTGCTTTCTGTGGTGAGCCGCATAAAGTATAGCAGTTTTGGATGGCTGAATACAGTTCACAGTTCAGCTGCTAATGTGACAGGAAAAGTTTTTGTGCCCTCAGGCGCTCTTGCTGCCGTCTTTCATAATTCCTTACCTCAATCACAGCAGTATGTCAATGTAAAGGCAAATTCCCTAGAGCATTTGTTGGTTTATACACCGTCTGGTCATGTTGTTCAGCATGAACTTCTGCCATCAGTTGGTCCAGAACCCAGCGATAGTGGCTCAAGAACCCAGTCGGCTTCACTCATGCATATGCAGGATGATGAATTCAGAGTAAAAGTTGAACCTATTCAATGGTGGGATGTATGTAGAAGGTCAGAATGGTCAGAAAGAGGGGATCCTTGCTGCAATACCTTTGATAGACAAGATGGTAGTGAGATAGTTCAAGAGAAAACATGTTCTGGTGATGGCTATGGACTGGACTTTTTGGATATAAGTGATGGTGTTGGGGAGAAGAAGGTGGTAAAATGTTCCACTGGAATGGTCCAAGAAAGATCCCACTGGTATCTGTCTAATGCTGAGTTGCAGGTAAACTTTGGAAGGCTTCCCATATGGCAGAAGTCTAAGATTTGCTTCTACACAATCAATTCTGTGAGAAATAATACTATTTCCAATGGAGAGTCTGAAATTGAGCAGATCTCCGTTAATGAAGTTGAAATAAGAAGGAAGGAGTTGTTGCCTGTTTTTGACCATTTCCATAGCATCAGACCGAGTTGGAATGAAAGAGGCTTAGCTGGAGAAAGATTTTCAAATTCAACATCTTCAGTTTCTCATCAGGCTGAAGACAAGCCAACTGCTGACGTGACAGTTATTTGTCACTCAAAGCCAGCATCACTCAGCTCTACCGAAAGTTCTGATGGTGGTAAAAATTAA 2391 0.4421 MKKGKGRNNGLLPNSLRIISSCLKTVSTNASTVASTVRSAGASVAASISSTSEDHKDQVTWAGFDRLELEQSVIKHVLLLGYLNGFQVLDVEDASGFSELVSKRDGPVSFLQMQPFPVGSDGQEGFKKSHPLLLVVAGDDTSRRDGSVETQSGNCVNSATAVRFYSLKSHSYVHVLRFRSTVCMIRCSSRIVAVGLATQIYCFDALTLENKFSVLTYPVPQLAGQGTTSVNVGYGPMAVGSRWLAYASNNPLPLNVGRLSPQNLSPSPGVSPSTSPGSGSLVARYAMESSKHLASGIIKYCQELLPDGSSSPVPSNSGWKVGRATGMDTDNAGMVVVKDLVSRAIISQFKAHTSPISALCFDPSGTLLVTASVYGNNINIFRIMPSCTRKGSGVPSYDWSSSHVHLYKLHRGITSAMIQDICFSHFSQWIAIVSSKGTCHLFVLSPFGGDTGFRIINSQGEEPSLLPVLSLPWWSSSYSMSGQQPSPPPAPAVLSVVSRIKYSSFGWLNTVHSSAANVTGKVFVPSGALAAVFHNSLPQSQQYVNVKANSLEHLLVYTPSGHVVQHELLPSVGPEPSDSGSRTQSASLMHMQDDEFRVKVEPIQWWDVCRRSEWSERGDPCCNTFDRQDGSEIVQEKTCSGDGYGLDFLDISDGVGEKKVVKCSTGMVQERSHWYLSNAELQVNFGRLPIWQKSKICFYTINSVRNNTISNGESEIEQISVNEVEIRRKELLPVFDHFHSIRPSWNERGLAGERFSNSTSSVSHQAEDKPTADVTVICHSKPASLSSTESSDGGKN 796
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Sto8g0554 796 SUPERFAMILY WD40 repeat-like 162 442 IPR036322 GO:0005515
Sto8g0554 796 Pfam Breast carcinoma amplified sequence 3 489 733 IPR022175 -
Sto8g0554 796 PANTHER BREAST CARCINOMA AMPLIFIED SEQUENCE 3 6 795 IPR045142 GO:0006914
Sto8g0554 796 Gene3D - 21 448 IPR015943 GO:0005515
Sto8g0554 796 SMART WD40_4 342 382 IPR001680 GO:0005515
Sto8g0554 796 SMART WD40_4 400 443 IPR001680 GO:0005515
Sto8g0554 796 Pfam WD domain, G-beta repeat 347 374 IPR001680 GO:0005515
Sto8g0554 796 PANTHER AUTOPHAGY-RELATED PROTEIN 18H 6 795 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Sto8g0554 Sto-Chr8 3404734 3409416 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Sto8g0554 - - gmx:100785780 1182.55
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Sto8g0554 8 3404734 3409416 Sto8g0554 8 3404734 3409416 ECH