Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Sto8g0542 ATGAGTTCGGGAGGATCAACCAAAGGTGGTAGGGGTAAGCCCAAATCCTCCAAATCCGTTTCTAGGTCTCAGAAGGCTGGTCTTCAATTCCCCGTCGGCCGTATTGCTCGCTTTCTTAAAGCCGGTAAGTATGCTGAACGTGTTGGTGCCGGTGCTCCCGTCTATCTCTCTGCCGTATTGGAATATCTTGCCGCTGAGGTTCTTGAACTTGCCGGCAATGCTGCTAGAGATAACAAGAAGAATCGCATTGTTCCAAGGCATATACAGCTTGCTGTGCGTAATGATGAGGAGTTGAGCAAGCTCTTAGGAACTGTCACTATTGCCAATGGTGGTGTTTTGCCAAATATTCACCAAAATCTTCTGCCAAAGAAGATGGGGAAGGGAAAAGGCGAGATTGGATCGGCATCTCAAGAATTCTAA 420 0.4762 MSSGGSTKGGRGKPKSSKSVSRSQKAGLQFPVGRIARFLKAGKYAERVGAGAPVYLSAVLEYLAAEVLELAGNAARDNKKNRIVPRHIQLAVRNDEELSKLLGTVTIANGGVLPNIHQNLLPKKMGKGKGEIGSASQEF 139
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Sto8g0542 139 PRINTS Histone H2A signature 18 40 IPR002119 GO:0000786|GO:0003677|GO:0030527
Sto8g0542 139 PRINTS Histone H2A signature 47 62 IPR002119 GO:0000786|GO:0003677|GO:0030527
Sto8g0542 139 PRINTS Histone H2A signature 62 75 IPR002119 GO:0000786|GO:0003677|GO:0030527
Sto8g0542 139 PRINTS Histone H2A signature 76 90 IPR002119 GO:0000786|GO:0003677|GO:0030527
Sto8g0542 139 PRINTS Histone H2A signature 104 122 IPR002119 GO:0000786|GO:0003677|GO:0030527
Sto8g0542 139 Pfam C-terminus of histone H2A 96 129 IPR032454 -
Sto8g0542 139 Pfam Core histone H2A/H2B/H3/H4 13 93 IPR007125 GO:0003677
Sto8g0542 139 SMART h2a4 7 127 IPR002119 GO:0000786|GO:0003677|GO:0030527
Sto8g0542 139 MobiDBLite consensus disorder prediction 1 25 - -
Sto8g0542 139 PANTHER HISTONE H2A 4 137 - -
Sto8g0542 139 PANTHER HISTONE H2A 4 137 IPR002119 GO:0000786|GO:0003677|GO:0030527
Sto8g0542 139 CDD H2A 12 124 IPR002119 GO:0000786|GO:0003677|GO:0030527
Sto8g0542 139 ProSitePatterns Histone H2A signature. 26 32 IPR032458 -
Sto8g0542 139 SUPERFAMILY Histone-fold 10 128 IPR009072 GO:0046982
Sto8g0542 139 Gene3D Histone, subunit A 4 131 IPR009072 GO:0046982
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Sto8g0542 Sto-Chr8 3358240 3359418 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Sto8g0542 K11251 - csin:114256722 223.787
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Sto8g0542 8 3358240 3359418 Sto8g0542 8 3358240 3359418 ECH