Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Sto8g0532 ATGCAAAAAGGAGTGGGAATAGCAAAAGGTGAAATGCAATTCACACGGATCCCATACCTGCACAGCTCTGATGCTACAGACTTTACAATGCCTACAACAGCAAACTTTGACACTGAATACGTGTGCTGGGCCATCCCACCAATCACCCCAGTGACACTTGCTGTACACAGAATGGACCCACATCCACGTGGGATCATCACACGTGCCGCATGCTTCATCCCTGCCATGACTCCTCGTACATTAATGTCCATGACCTTGTCAAACACTGTGAGATCAAGGTCAACTATGCTTGGAGGAGTCTTGCAGGCTATCCCTGCATTGTTGTACATGATGTCAAGTTGGTTGTATTCAGAAATGGCAAAATCAACTGCCTTAGATATGTCTGATTCTTTAGTGACATCACAGGTTATGAAGGTAGCATTTTGGCCTAGTTGTTTTGCTGTCTCTTGCCCAAGCTCTTGTTGGATATCAGCAATAATAACCTTTGCACCATTATTGATGAACTTTGTTGCTGTAGCCTTCCCTATACCACTTGCTGCCCCGAGTAGACAAGAATCTGTTGAAGCTTTCAGCAAAAACAACTCTCGAAGTAGAGACCCTTTCACTGTTTTGACAATTATCGAAACACACAGAAACGTCAAAGATGCAAATAATGATGTGTATCAGCAATTTCAGGAGACTGAACTCTTCGAAGACACCTTAGTACTCCATAGTCCCTTAGTTGATACTCAGGTGGAAACTTTGGATTTGAACTCTGAGCTAGTGAAATATACATATTCAGGCTCTGTAAAAACCATGACAACAGATTCAATATGTGCGTATGAACAAGAAGTAGTGCTTGATAGTGAAGATGAAGAAATGCATGATAGTAAAGTTGTAGCTGGTGCCAAAGGGTTATGGGATCAAAAAACTGATCGAACAGTCAAAAGTCCTTCTGTAAAGTTCCAGAAAAGGCAGCTCGAGTCATTTTCACCTTGTAAGCAAGTGGACGAGAGAGTAAACACAATTGCCAATTCTTTTGGGAAAGCCGTTGCTGGGGACAGTGAAGCTTCAGAATTCTCCCAAGCCAATGCACTTGGCTATGTGGATCACTATTTGTCATTGAACAATGTGGAATTATCTCCAGGAATTTGCCATGGAAAGGTCACTAGAGAGAAATCACCTCCTGTCGTAAGTGTAAGAGGAATACGGAATTTGGCTAAGAAAATTCAAGTTCGGACCCATCGCgaagaaaaaaaacatgaaaGTGGCCAAAATGAAAGGGAAGCTGGTATCTTCTGTAAAAATATTAAAGCATCTTCAAATTTTGGAGTCTGTGGACAGACATATAAAAGAAGACCAAAGAGAAATGGTTATGTTGATAACCAAGGAAACTTTAGCACAGGTAAAAGATGTGAAGAGAAGTTAGTGCAAGGACCAGGAACAGTAGTTGAGAATAACAATTCTATCAAGGAGTTGGATGTTCCGTTGGATGCAACAAGGGAGAATGTTGACGCTTATTCTGGTGTAACACATATAGAGGACATACCGGATATCGGTTTAGACACCCAAATAGCTGCTGAAGCTATGGAGGCCTTAGCCTATGTGCCCCCTTCTGAGAGTAGATGCACAAAGCTGGAAGATCAACCAAGCAGACCTAGAAAGAGGAATAATGATTTTGTAGAGGGAGGTACTGTGAGTTACAAAAGGAAAAGGAATGGTTTAGTAGCCGACCCATTCAAGTTGGTTCACGAACCAAAATATCTTAGGTTGCCTTGCAGTTCATTTAGGGTGGCTAGGAAGTACAGGTTGAATTGCCAGGTTCAAGTTAGTCCTCAGCTACCCACCAACAGCAGTTTTTTAAGGCTCAGTTCATGGCCTTATCCCAAGGGACCAAGAGGGATAAGAAAATCTCCTATTGCGCAAAACCATCCAGACGCACCTTTAAATTCGTGTACCCAGTCTACTATAGTGAGTGGAAAAGAAAGCGATACCCACTCTACCAGAAGCCAGAGAGGTCTAGAAGGCCAAGTTGATGTGAACACATCATGTTTTCCTCACGCACACCCACTTCATAACGCTAAATGTATCGACACTGGTGTCACTAGTGAAGGCAAAAAGGTTTCAAACGCTAATGTTACATGCTATAAGCATCACAAAAAGCCATGCAATCAAAACGTGCCAAAGTCCTCCCTTTTGAAGGAGCTTATTAGATTAGGAGTTTCTGAGTCCGCAACAGATCTGACAGGGAAAGATCTGAGACAACGAAGAGATATGTCATGTGTTCGAGTTCTGTTTAGCCAGCATTTGGATGAGGGTATCATTAAGCAGCAAAAAAAGATCTTGGCACGGCTGAACATATCTACTGCATCATGCTCCACGGAGGCCACACATTTTGTAGCGGACAAATTCACTCGTACACAGAATATGTTGGAGACCGTGGCTCTTGGTAAATTAGTGGTGACACATTTATGGCTTGAGAGCTGTGGACAGGCAAACTGTCTTATTGATGAGAAAAATTACATTCTACGAGATGGGAAAAAGGAGAAGGAGATGGGCTTTAGCATGCCTGTTTCTCTTGCTCGAGCGAAACAGCAGCCACTTCTAAAGGGTAAACGAGTTTTCATCACTCCGCGCATTAAACCTGATAACAAAGTGATCACAAGCTTGGTTACTGCTGTTCATGGCCAGGTAGTGGATGAATGCCAGATATATGCAGGCAAGAATGATAAGATAATAGATGAACTACTGATTCTTTCATGTGAAGAAGATTATGCAGTATGCCGCCCGTTCCTTGAGAGagGCATTGCTGTTTATTGTTCAGAGCTCCTACTGAGTGGAATAGTAACCCAGAAACTGGAACTTGAGAGATATCAACTCTTCGCGAATCGCGTTGCAAGGAATAATATCGCCACATCTAGTCGTTTTGGGAAGGGGGCCTGGGCAAGGTATTTGCTTGACCTGGTGCCAAGGGAGCACCAGGTGGAGGTACCATTGGAGGCATGGGAAAAGAGATCGGCTGAAATATTCCACCCAAGCAGGGAACAAGAGAAGGCTGAAATGGCTGAAAATTCCTCTTCCAACAAGTCGGGACCTTCAGGACCCGGGAATGATGAGAAGCAGGATTGGGCTGCCTCCCCTGCCAGTGCTTTCTATCACTTTGGTACAAGCGGACTTTCTGTAGCTGTAGCCACTGCAGTTACTCATCCTTTAGATGTACTAAAAGTCAGGCTGCAAATGCAACTTGTTGGCCAGAAAGGTCCCTTGAGTGGGATGGGACAACTATTTTTCCGAGTACTGAAAAACGAGGGACCAAGGTCTTTGTATCTGGGTTTGACACCTGCATTAACAAGGTCAGTTGTTTATGGAGGAATACGCTTGGGCTTGTATGAACCCTCTAAGCATGCCTGTGATCTTGCTTTTGGCTCCACCAATGTTTTAGTTAAAATTGCTTCTGGAGTATTTTCTGGTGCTTTTGCGACTGCACTGACCAATCCAATTGAAGTTCTCAAGGTGCGTTTGCAAATGAATCCAGACAAGAGAAAGGGAGGTCCAATTCTAGAGCTTCAGAGGACTATATCCGAAGAGGGAATCAGAGGCCTTTGGAAGGGAGTGGGCCCTGCTATGGTCAGAGCAGCTGCCTTGACTGCATCACAGCTGGCTTCATATGATGAAACCAAGCAGATCCTAATCAGGTGGACATCTCTTGAAGAAGGATTTCGTCTGCATCTGATCTCAAGTACAGTTGCAGGCATAGTGAGCACCCTAATAACTGCACCTATGGATATGGTTAAAACTCGGCTCATGTTGCAGCGAGAATCCAAAGGTGCTGGAAGCTATAAAAGCGGATTTCATTGTGCATACCAGGTTCTGCGTACAGAAGGCCCAAGGGCACTTTACAAAGGGGGATTTGCAATATTTGCAAGATTAGGGCCACAAACCACAATTACCTTATTGTTATGCGAGGAGCTACGGAAGCTTGCTGGATTGAAAGCAATCTAG 3981 0.4371 MQKGVGIAKGEMQFTRIPYLHSSDATDFTMPTTANFDTEYVCWAIPPITPVTLAVHRMDPHPRGIITRAACFIPAMTPRTLMSMTLSNTVRSRSTMLGGVLQAIPALLYMMSSWLYSEMAKSTALDMSDSLVTSQVMKVAFWPSCFAVSCPSSCWISAIITFAPLLMNFVAVAFPIPLAAPSRQESVEAFSKNNSRSRDPFTVLTIIETHRNVKDANNDVYQQFQETELFEDTLVLHSPLVDTQVETLDLNSELVKYTYSGSVKTMTTDSICAYEQEVVLDSEDEEMHDSKVVAGAKGLWDQKTDRTVKSPSVKFQKRQLESFSPCKQVDERVNTIANSFGKAVAGDSEASEFSQANALGYVDHYLSLNNVELSPGICHGKVTREKSPPVVSVRGIRNLAKKIQVRTHREEKKHESGQNEREAGIFCKNIKASSNFGVCGQTYKRRPKRNGYVDNQGNFSTGKRCEEKLVQGPGTVVENNNSIKELDVPLDATRENVDAYSGVTHIEDIPDIGLDTQIAAEAMEALAYVPPSESRCTKLEDQPSRPRKRNNDFVEGGTVSYKRKRNGLVADPFKLVHEPKYLRLPCSSFRVARKYRLNCQVQVSPQLPTNSSFLRLSSWPYPKGPRGIRKSPIAQNHPDAPLNSCTQSTIVSGKESDTHSTRSQRGLEGQVDVNTSCFPHAHPLHNAKCIDTGVTSEGKKVSNANVTCYKHHKKPCNQNVPKSSLLKELIRLGVSESATDLTGKDLRQRRDMSCVRVLFSQHLDEGIIKQQKKILARLNISTASCSTEATHFVADKFTRTQNMLETVALGKLVVTHLWLESCGQANCLIDEKNYILRDGKKEKEMGFSMPVSLARAKQQPLLKGKRVFITPRIKPDNKVITSLVTAVHGQVVDECQIYAGKNDKIIDELLILSCEEDYAVCRPFLERGIAVYCSELLLSGIVTQKLELERYQLFANRVARNNIATSSRFGKGAWARYLLDLVPREHQVEVPLEAWEKRSAEIFHPSREQEKAEMAENSSSNKSGPSGPGNDEKQDWAASPASAFYHFGTSGLSVAVATAVTHPLDVLKVRLQMQLVGQKGPLSGMGQLFFRVLKNEGPRSLYLGLTPALTRSVVYGGIRLGLYEPSKHACDLAFGSTNVLVKIASGVFSGAFATALTNPIEVLKVRLQMNPDKRKGGPILELQRTISEEGIRGLWKGVGPAMVRAAALTASQLASYDETKQILIRWTSLEEGFRLHLISSTVAGIVSTLITAPMDMVKTRLMLQRESKGAGSYKSGFHCAYQVLRTEGPRALYKGGFAIFARLGPQTTITLLLCEELRKLAGLKAI 1326
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Sto8g0532 1326 PANTHER BRCT DOMAIN-CONTAINING PROTEIN-RELATED 537 961 - -
Sto8g0532 1326 PANTHER BRCT DOMAIN-CONTAINING PROTEIN-RELATED 210 541 - -
Sto8g0532 1326 Pfam Regulator of Ty1 transposition protein 107 BRCT domain 755 836 IPR001357 -
Sto8g0532 1326 Gene3D BRCT domain 858 960 IPR036420 -
Sto8g0532 1326 SUPERFAMILY Mitochondrial carrier 1041 1316 IPR023395 -
Sto8g0532 1326 Gene3D Mitochondrial carrier domain 1045 1323 IPR023395 -
Sto8g0532 1326 PANTHER PAX TRANSCRIPTION ACTIVATION DOMAIN INTERACTING PROTEIN 537 961 - -
Sto8g0532 1326 PANTHER PAX TRANSCRIPTION ACTIVATION DOMAIN INTERACTING PROTEIN 210 541 - -
Sto8g0532 1326 MobiDBLite consensus disorder prediction 538 552 - -
Sto8g0532 1326 ProSiteProfiles Solute carrier (Solcar) repeat profile. 1041 1129 IPR018108 -
Sto8g0532 1326 SUPERFAMILY BRCT domain 751 852 IPR036420 -
Sto8g0532 1326 CDD BRCT_MDC1_rpt1 755 829 - -
Sto8g0532 1326 MobiDBLite consensus disorder prediction 1007 1035 - -
Sto8g0532 1326 Gene3D BRCT domain 744 857 IPR036420 -
Sto8g0532 1326 ProSiteProfiles Solute carrier (Solcar) repeat profile. 1137 1222 IPR018108 -
Sto8g0532 1326 ProSiteProfiles Solute carrier (Solcar) repeat profile. 1231 1320 IPR018108 -
Sto8g0532 1326 ProSiteProfiles BRCT domain profile. 773 836 IPR001357 -
Sto8g0532 1326 CDD BRCT_PAXIP1_rpt6_like 861 947 - -
Sto8g0532 1326 Pfam Mitochondrial carrier protein 1234 1320 IPR018108 -
Sto8g0532 1326 Pfam Mitochondrial carrier protein 1041 1128 IPR018108 -
Sto8g0532 1326 Pfam Mitochondrial carrier protein 1137 1224 IPR018108 -
Sto8g0532 1326 MobiDBLite consensus disorder prediction 534 557 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Sto8g0532 Sto-Chr8 3274649 3288404 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Sto8g0532 1047 1319 Miscellaneous Gene Families AT3G54110 32.867 8.34e-45 163
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Sto8g0532 - - gmx:100808194 511.916
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Sto8g0532 8 3274649 3288404 Sto8g0532 8 3274649 3288404 ECH