Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Sto8g0484 ATGGCCTCAGAATTGATATTCAGAGGGCACGAGACCCAACCCGTCCACGACGCCTACTCTCCCAAGCCCCTCAAGCCATGGTTCTCTATCACTCGACCAATTCGCTACCTCCTCCGCGACCAACGACTCATTTTCATCCTCCTCGGCATTGCCATAGCCACACTCTTCTTCACCTTCGCGCCTTCCTCTCGCAACAACCCAGCCCCTGACTATGACTCTCTTCCTATCCCTTACTTCCAGCACGATTCCATCAGTACCAAGTCACTCCCTTACAGGATGCCCATCCATACCCAGCTTGGGAAGGTCCCTTTGGGGATTCAGAGAAAGGGTCTTCGGATCGTCGTCACGGGCGGGGCGGGTTTTGTCGGTTCACACCTCGTGGATCGTCTGATTGCCAGAGGCGATAGCGTGATTGTGGTGGATAATTTCTTCACCGGAAGGAAAGAGAATGTGATGCACCACTTTGGGAACCCCAGATTTGAGCTCATCCGACACGACGTCGTTGAGCCCCTTCTGCTCGAGGTGGATCAGATCTACCATCTTGCATGCCCCGCATCCCCTGTTCATTACAAGTTCAACCCCGTCAAGACTATCAAGACCAATGTGGTGGGGACCTTGAACATGCTGGGACTGGCTAAAAGAGTCGGCGCAAGGTTTTTACTAACCAGTACGAGTGAGGTTTATGGCGATCCTCTCCAACATCCTCAGAAGGAGACTTATTGGGGCAACGTAAATCCAATTGGTGTCCGAAGCTGCTACGACGAGGGAAAGCGTACGGCTGAGACGTTGACTATGGATTACCATAGAGGAGCAGGCGTGGAGGTTAGAATTGCTAGAATCTTTAACACCTACGGTCCCCGAATGTGCTTAGATGATGGTCGTGTTGTTAGTAACTTCGTTGCTCAGGCACTGAGAAAGGAACCTTTGACTGTTTATGGCGATGGAAAGCAGACAAGGAGTTTCCAGTATGTTTCTGATTTGGTGGAGGGTCTGATGCGCCTTATGGAGGGGGAGCATGTCGGACCTTTCAATCTCGGAAATCCGGGTGAATTCACAATGCTTGAACTTGCCAAGGTGGTCCAAGACACAATAGACCCAGATGCGAAGATAGAGTACAGGCCCAACACAGAGGATGACCCACACAAGAGGAAGCCTGATATCTCAAGGGCCAAGGACCTACTGGGGTGGGAGCCCAAGGTGGACCTGCGCAAGGGTCTTCCTTTGATGGTTTCTGATTTCCGACAACGTATTTTTGGTGACCACAAGGAAGGTGCAACCTCCACCTAA 1287 0.5159 MASELIFRGHETQPVHDAYSPKPLKPWFSITRPIRYLLRDQRLIFILLGIAIATLFFTFAPSSRNNPAPDYDSLPIPYFQHDSISTKSLPYRMPIHTQLGKVPLGIQRKGLRIVVTGGAGFVGSHLVDRLIARGDSVIVVDNFFTGRKENVMHHFGNPRFELIRHDVVEPLLLEVDQIYHLACPASPVHYKFNPVKTIKTNVVGTLNMLGLAKRVGARFLLTSTSEVYGDPLQHPQKETYWGNVNPIGVRSCYDEGKRTAETLTMDYHRGAGVEVRIARIFNTYGPRMCLDDGRVVSNFVAQALRKEPLTVYGDGKQTRSFQYVSDLVEGLMRLMEGEHVGPFNLGNPGEFTMLELAKVVQDTIDPDAKIEYRPNTEDDPHKRKPDISRAKDLLGWEPKVDLRKGLPLMVSDFRQRIFGDHKEGATST 428
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Sto8g0484 428 SUPERFAMILY NAD(P)-binding Rossmann-fold domains 109 418 IPR036291 -
Sto8g0484 428 PANTHER UDP-GLUCURONIC ACID DECARBOXYLASE 4 1 424 - -
Sto8g0484 428 Gene3D - 234 418 - -
Sto8g0484 428 Gene3D - 107 233 - -
Sto8g0484 428 Pfam GDP-mannose 4,6 dehydratase 115 407 IPR016040 -
Sto8g0484 428 PANTHER UDP-GLUCURONIC ACID DECARBOXYLASE-RELATED 1 424 IPR044516 GO:0042732|GO:0048040|GO:0070403
Sto8g0484 428 CDD UGD_SDR_e 112 414 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Sto8g0484 Sto-Chr8 2984098 2987098 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Sto8g0484 20 406 Miscellaneous Gene Families AT4G00110 24.113 6.91e-21 92.4
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Sto8g0484 K08678 - gmx:100783463 764.607
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Sto8g0484 8 2984098 2987098 Sto8g0484 8 2984098 2987098 ECH