Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Sto8g0462 ATGGCATCTACTCCTTCGATGTCAGTTTCTTTAGAATGCGTGAATGCATGCAAGTTGTCGAGAGGAGATGGAAGCGGACGATACGACTGTAGTGTTCTTTCATGCGCGTGGAAAGCTCCTAGGGTCCTTACTGGGTTCCTTGCGAGTACAGCTCATCCTCATCAGTGTACATCCTTGTCCTTTGGGCGAAATGGAAGAAGGAACGGGTATAATTTTGGATGTGAAGCATTGAATATAGTAGGTTCATATTCAGATGAAGCTTGTGATATTATACATGGAGGATTCTCTAGATCAATCTTCTCTCAAGTTGCTACTAAGAGATGTCGATTCTGTTGTTCGTTCTCCTCCTCCTTGGACACTGCCAATGACGTTTCACCGGAAAGATTGTGGGAGGATCTAAAACCTGTCATCTCATACCTTTCACCTCAGGAATTGGAGTTGGTCCATAATGCTCTTTTGTTGGCATTTGGAGCTCATGATGGCCAGAAAAGACGCAGTGGTGAACCCTTCATTATTCATCCAGTTGAGGTTGCGCGTATTCTTGGAGAACTTGAACTTGACTGGGAGTCGATTGCTGCTGGATTACTGCATGATACCGTTGAGGATACGAACATTGTTACTTTTGAGAGAATCGAGGAGGAGTTTGGCACTACTGTGCGCCACATTGTAGAAGGAGAGACTAAgGTATCTAAGCTAGGGAAGTTGAAGTACAAGAACGAAAACAATTCTGTACAAGATGTGAAAGCAGAGGATCTTCGGCAAATGTTCCTAGCCATGACAGAGGAGGTCCGTGTTATTATTGTCAAATTGGCAGACAGATTACATAACATGCGAACTTTATCATATATGCCTCCACATAAACAGACTAGCATTGCGATGGAGACATTGCAGGTATTTGCTCCTTTGGCGAAGTTGCTTGGGATGTATCAAATTAAGtcAGAGCTAGAAAATCTATCATTCATGTACACAAATCCTGAAGATTATGCTAAGGTTAAAAGAAGAGTTGCGGACATGTATAAAGAACATGAGAAAGAACTTCTGGAGGCAAACAAAATATTGGTGAAGAAAATCCAGGATGATCAGTTATTAGACCTTTTGACTGTGAAAACTGAAGTTCGTGCTGTGTGTAAGGAGCCTTACAGTATCTACAAAACCGTTCTCAAATCAAAAAGTTCGATCAATGAGATTAACCAAATTGCACAGCTTCGTATCATCATAAAACCAAAGCCATGCATTGGGGTTGGGCCTTTATGCAGTCCACAGCAGAGTTCCTATCATGTTCTGGGGTTGGTCCATGGAATATGGACTCCTATTCCTAGAGCTGTGAAAGATTATATTGCAACCCCCAAACCTAATGGCTACCAGAGTCTCCATACAACGGTGATTCCATTTTTATATGAGAGCATGTTTCGCCTAGAAGTCCAGATCAGAACTGAAGAAATGGATTTAATAGCTGAGAGAGGGATTGCTGCTCATTATAGTGGAAAGGAATTTGTCACTGGCTTGGTTGGAAGCGCAATGCCTTGTAGTAGAAGCTCAAGAGGAAAGACAGTCTGTCTTAACAATGCAAACATTGCTCTTAGAATTGGTTGGCTCAATGCAATTAGAGAGTGGCAAGAAGAGTTTGTTGGCAACATGAGTTCCAGGGAATTTGTTGACACTGTTACCAGAGACCTGTTGGGTAGTCGTGTCTTCGTGTTTACACCCAGGGGGGAGATTAAGAATCTTCCCAAGGGAGCTACTGTTATTGACTATGCTTATATGATACACACTGAAATTGGGAACAAAATGGTAGCTGCAAAGGTCAATGGAAATCTCGTTTCTCCTTCACACATACTTGCAAATGCGGAAGTAGTAGAGATAATCACATATAATGCACTTTCCAGCAAATCAGCTTTTCAGAGGCATAAGCAGTGGTTGCAACATGCTAAAACACGTAGTGCAAGACACAAAATTATGAAGTTTCTGAGGGAGCAGGCAGCACTTTCTGCGGCTGATATAACTTCAGAAGCAGTCAATGACTTCGTCTCTGATTCAGAAGGGGATAGTGAATCTGAAGAATTGCTGGATGGTTCTAGTGGTGTGATACCTATGTGGGACAAAATGGTTATGAATGTTGTGGAAAAGTCGTCCCCAGAAAAAAGGGAGGATGTCCTCCAAAGTAAGAATGGAAGTGTTTGGACCCCTAAGGTCAATGGAAAACATAACAAACATTTGCAGCATGTAAGTTTGAAGGGTGATGGGGAGTTATTGCTGCAAGCAAACCATGTGGCCAATATGATTCAAGTTAATATTCCTAGATACAAGGAAGTCTTGCCAGGTTTAGAGAGTTGGCAAGCCCAGAAAATTGCCTCCTGGCACAATATAGAAGGGCATTCCATTCAATGGTTTTGTGTAGTATGCATAGACCGGAAAGGTATGATGGCTGAGGTCACAACAGCATTGGCCGATACAGGTGTAACCATTTGTTCTTGTGTGGCCGAGGTTGATGGAGGGAGGGGAATGGCTGTCATGTTGTTTCACGTTGAAGGGAAGTTAGAGAGTTTGGTGAGTGTTTGCACTAGAGTAGATCAAATACTTGGTGTTTTAGGTTGGTCTACTGGTTGCAGCTGGCCAAGCTTGATGGCAAGTAATGGTGTTCTCGAATGCTAG 2652 0.4257 MASTPSMSVSLECVNACKLSRGDGSGRYDCSVLSCAWKAPRVLTGFLASTAHPHQCTSLSFGRNGRRNGYNFGCEALNIVGSYSDEACDIIHGGFSRSIFSQVATKRCRFCCSFSSSLDTANDVSPERLWEDLKPVISYLSPQELELVHNALLLAFGAHDGQKRRSGEPFIIHPVEVARILGELELDWESIAAGLLHDTVEDTNIVTFERIEEEFGTTVRHIVEGETKVSKLGKLKYKNENNSVQDVKAEDLRQMFLAMTEEVRVIIVKLADRLHNMRTLSYMPPHKQTSIAMETLQVFAPLAKLLGMYQIKSELENLSFMYTNPEDYAKVKRRVADMYKEHEKELLEANKILVKKIQDDQLLDLLTVKTEVRAVCKEPYSIYKTVLKSKSSINEINQIAQLRIIIKPKPCIGVGPLCSPQQSSYHVLGLVHGIWTPIPRAVKDYIATPKPNGYQSLHTTVIPFLYESMFRLEVQIRTEEMDLIAERGIAAHYSGKEFVTGLVGSAMPCSRSSRGKTVCLNNANIALRIGWLNAIREWQEEFVGNMSSREFVDTVTRDLLGSRVFVFTPRGEIKNLPKGATVIDYAYMIHTEIGNKMVAAKVNGNLVSPSHILANAEVVEIITYNALSSKSAFQRHKQWLQHAKTRSARHKIMKFLREQAALSAADITSEAVNDFVSDSEGDSESEELLDGSSGVIPMWDKMVMNVVEKSSPEKREDVLQSKNGSVWTPKVNGKHNKHLQHVSLKGDGELLLQANHVANMIQVNIPRYKEVLPGLESWQAQKIASWHNIEGHSIQWFCVVCIDRKGMMAEVTTALADTGVTICSCVAEVDGGRGMAVMLFHVEGKLESLVSVCTRVDQILGVLGWSTGCSWPSLMASNGVLEC 883
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Sto8g0462 883 ProSiteProfiles TGS domain profile. 560 623 IPR004095 -
Sto8g0462 883 CDD TGS_RSH 565 623 IPR033655 -
Sto8g0462 883 CDD NT_Rel-Spo_like 367 487 IPR007685 GO:0015969
Sto8g0462 883 Pfam HD domain 151 308 - -
Sto8g0462 883 SUPERFAMILY Nucleotidyltransferase 325 500 IPR043519 -
Sto8g0462 883 MobiDBLite consensus disorder prediction 712 732 - -
Sto8g0462 883 SUPERFAMILY ACT-like 796 849 IPR045865 -
Sto8g0462 883 SMART RelA_SpoT_2 377 499 IPR007685 GO:0015969
Sto8g0462 883 Gene3D - 797 862 - -
Sto8g0462 883 Gene3D - 557 632 IPR012675 -
Sto8g0462 883 ProSiteProfiles HD domain profile. 170 277 IPR006674 -
Sto8g0462 883 Pfam TGS domain 564 623 IPR004095 -
Sto8g0462 883 PANTHER GTP DIPHOSPHOKINASE RSH1, CHLOROPLASTIC-RELATED 1 883 - -
Sto8g0462 883 Gene3D Beta Polymerase, domain 2 326 479 IPR043519 -
Sto8g0462 883 SUPERFAMILY TGS-like 551 623 IPR012676 -
Sto8g0462 883 Pfam Region found in RelA / SpoT proteins 377 494 IPR007685 GO:0015969
Sto8g0462 883 SMART hd_13 166 286 IPR003607 -
Sto8g0462 883 CDD HDc 168 299 IPR003607 -
Sto8g0462 883 Gene3D Hypothetical protein af1432 127 323 - -
Sto8g0462 883 SUPERFAMILY HD-domain/PDEase-like 134 323 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Sto8g0462 Sto-Chr8 2842342 2849677 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Sto8g0462 180 495 EF-hand Containing Proteins AT3G17470 28.916 2.81e-36 141
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Sto8g0462 K00951 - gmx:100786637 1473.76
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Sto8g0462 8 2842342 2849677 Sto8g0462 8 2842342 2849677 ECH