Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Sto8g0459 ATGGTATTCCCAGATTTATTCACAAGGTTGCTTGCTACATCAATGGAGTCCTGCGATTGCATTGACACACAATATTGGTCCCAAGATGACCTTCTTATGAAATATCAGTACATCTCAGATGTCTTAATTGCCCTTGCATATTTCTCAATTCCTTTGGAACTCATTTTCTTTGTTCAAAAATCTGCCTTCTTCCCATATAGATGGGTGGTTATACAGTTCGGTGCTTTCATCGTTCTCTGTGGAGCAACTCACTTCATAAACTTGTGGACATTCTCCATCCACTCTAAAGCTCTTGCTATGGTGATGGCATTTGCCAAAGTCTCATGCGCTATTGTATCTTGCGCCACTGCACTCATGCTCATTCACATCATCCCTGATCTACTGAGTGTCAAAACTCGAGAACTATTTCTCAAGAACAAGGCAGAAGATCTTGATAGAGAAATGGGGCTTATTCTTACCCAAGAAGAAACTGGAAGGCATGTTAGGATGTTGACTCATGAAATTAGAAGCACACTCGATAGGCATACCATTCTCAAGACTACTCTTGTTGAGTTGGGTAGGACTTTGGAGTTGGAGGAATGTGCATTGTGGATGCCATCAAGAAGTGGTCTTCATCTTCAACTTTCCCATACTTTAAGCTATGGTGTACAAGTTGGATCTGCTGTGCCCACCAATCTTCCTATTGTGAATGAGGTTTTTAACAGTTGTCGAGCAATAAGAATACCACACACTTGTCCACTGGCCAGAATTAGACCTGTTGAGGGAAGATACATGGCATTACCACACAAAGTTGTTGCTGTGAGAGTGCCTCTCTTGCATCTCTCAAATTTCCAAATCAATGACTGGCCCGATCTTTCTGCAAAAAGCTATGCAATCCTGGTTTTGATCCTTCCTGCGGATAGTGCTAGAAACTGGCGTGACCATGAGTTGGAACTTGTTGATGTTGTGGCAGATCAGGTGGCTGTAGCACTTTCACATGCTGCTATTTTGGAGGAGTCTATGAGAGCGCGTGATAAACTCATGGAACAGAATGTTGATTTAGATATGGCTCGAAGAGAGGCAGAGGTGGCAATCCATGCTCGCAATGATTTCCTTGCTGTGATGAATGATGAAATGAGGACACCAATGCATGCTATTATAGCTTTGTCTTCACTTCTCTTGGAGTCTGAACTGCCTCCTGAGCAGAGGGTTATGATAGAGACAACATTGAAGAGTAGTAATGTTTTGTCAACACTTATTAACGATGTGTTAGATCTTTCTAAGCTACAAGATAATAGCCTTGAGTTAGAATTGGGAAAATGCAACCTTCACGGGCTTCTGGGAGAGGTAACTAATCTGATAAAGCCGATTGCATCTGTGAAGAAAGTACTTGTGACCCTAATTCTGGCCCCCGATCTGCCTATGTTTGCCATTGGAGATGAGAAACGTCTGATGCAAATTGTTTTGAACGTTGTGGGTAACGCTGTCAAATTCACTAAGGAGGGCTATGTTTGTGTGAGAGCATCCGTTGCAAAACCTGGATGTTTACAGGATTGGAGACCTCCACAATTTTATCCACCATCAACACACACTCATCAATACATACGAATACAGGTTAAGGACTCTGGATGTGGAATTCTCCCACAAGATATTCCACATCTTTTTACCAAGTTTGCTGAGTCACGAAGTGGACCTGCTCTACTGAGCAACAGTGCAGGGGTAGGGCTAGGGCTAGGGCTTGCCATTTGTAAAAGATTTGTGAATCTCATGGAAGGTGACATATGGATTGAGAGTGAGGGCATTGGGAAAGGGAGCAGTACTACATTTATTGTCAAACTTGGGATTTGTGGGAAGCCAGATTCATCAGGACACCCAACTGCATATGGTGGAAGTGGACAGCTCACCAGCTTTGTCAAGGATACTGATGACCAAGCTTTGCCAAATCCACGCTATCAAAGAAGCCTTTGA 1947 0.4304 MVFPDLFTRLLATSMESCDCIDTQYWSQDDLLMKYQYISDVLIALAYFSIPLELIFFVQKSAFFPYRWVVIQFGAFIVLCGATHFINLWTFSIHSKALAMVMAFAKVSCAIVSCATALMLIHIIPDLLSVKTRELFLKNKAEDLDREMGLILTQEETGRHVRMLTHEIRSTLDRHTILKTTLVELGRTLELEECALWMPSRSGLHLQLSHTLSYGVQVGSAVPTNLPIVNEVFNSCRAIRIPHTCPLARIRPVEGRYMALPHKVVAVRVPLLHLSNFQINDWPDLSAKSYAILVLILPADSARNWRDHELELVDVVADQVAVALSHAAILEESMRARDKLMEQNVDLDMARREAEVAIHARNDFLAVMNDEMRTPMHAIIALSSLLLESELPPEQRVMIETTLKSSNVLSTLINDVLDLSKLQDNSLELELGKCNLHGLLGEVTNLIKPIASVKKVLVTLILAPDLPMFAIGDEKRLMQIVLNVVGNAVKFTKEGYVCVRASVAKPGCLQDWRPPQFYPPSTHTHQYIRIQVKDSGCGILPQDIPHLFTKFAESRSGPALLSNSAGVGLGLGLAICKRFVNLMEGDIWIESEGIGKGSSTTFIVKLGICGKPDSSGHPTAYGGSGQLTSFVKDTDDQALPNPRYQRSL 648
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Sto8g0459 648 SUPERFAMILY GAF domain-like 173 336 - -
Sto8g0459 648 PRINTS Bacterial sensor protein C-terminal signature 528 542 IPR004358 GO:0016310|GO:0016772
Sto8g0459 648 PRINTS Bacterial sensor protein C-terminal signature 567 585 IPR004358 GO:0016310|GO:0016772
Sto8g0459 648 SUPERFAMILY Homodimeric domain of signal transducing histidine kinase 347 425 IPR036097 GO:0000155|GO:0007165
Sto8g0459 648 PANTHER ETHYLENE RESPONSE SENSOR 1 15 647 - -
Sto8g0459 648 Pfam His Kinase A (phospho-acceptor) domain 361 423 IPR003661 GO:0000155|GO:0007165
Sto8g0459 648 PANTHER TWO-COMPONENT SENSOR HISTIDINE KINASE 15 647 - -
Sto8g0459 648 Pfam Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase 472 606 IPR003594 -
Sto8g0459 648 Gene3D - 425 610 IPR036890 -
Sto8g0459 648 SMART HKATPase_4 472 610 IPR003594 -
Sto8g0459 648 CDD HisKA 358 421 IPR003661 GO:0000155|GO:0007165
Sto8g0459 648 Pfam GAF domain 173 324 IPR003018 GO:0005515
Sto8g0459 648 SUPERFAMILY ATPase domain of HSP90 chaperone/DNA topoisomerase II/histidine kinase 414 606 IPR036890 -
Sto8g0459 648 Gene3D - 326 423 - -
Sto8g0459 648 Gene3D - 153 325 IPR029016 -
Sto8g0459 648 SMART gaf_1 173 334 IPR003018 GO:0005515
Sto8g0459 648 ProSiteProfiles Histidine kinase domain profile. 367 610 IPR005467 -
Sto8g0459 648 SMART HisKA_10 360 425 IPR003661 GO:0000155|GO:0007165
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Sto8g0459 Sto-Chr8 2826890 2829204 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Sto8g0459 15 615 Miscellaneous Gene Families AT1G66340 71.381 0.0 863
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Sto8g0459 K14509 - gmx:100802569 967.222
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Sto8g0459 8 2826890 2829204 Sto8g0459 8 2826890 2829204 ECH