Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Sto8g0425 ATGGCTCCTTCACGTCGCCAGAGCAATGGTCGATCACCGCTCGTCAATCAACAGCGCCAAATCACTTCCTTCTTTTCTAAatccacttcttcttcttctcctcctcctactAACTCCAATCAAAAGCTAAACATCTCAGATCCTAACCCTACACCCAGCCCTGCCACACCTTCTCCTCCCGATCACAAACCCCTCCTTATCATTGGCGCTTCATCATTGCCCTCTCCCTTTTGTTCGTCCTATGGAGATAAGCAACTCAACGGTCAAGAGGTGGTTGGTAGAAGAATCAAGGTCTATTGGCCATTGGATAAAGCCTGGTATGAAGGTTGTGTCAAATCTTTTGACGAGGTTACTGGTAAGCATTTGGTTCTCTACGACGATGACGAAGAGGAAACATTGGACATTGCCGAGGAGAAGATTGAGTGGGTTCAAGAGACCGCCAAGAAACTTAAGCGGCTACGACGTCACGGTTTTGCTGATATAAGGAAGATGGTGATTGAGGACGAGGACGGCGCCGAGAATGAGGACGGCAAGGTAGACGAATGCCGTGGTGGTGATAATTCTTGTGAAGATTGGAGGAAGAAAGAGGTAGTCGAGGAAGGTGAGGAGTATATGAAGTTAGAGAAAAAGGATGAAGAGGACATAACTGAGGGGCCTAATGGAAAGAGAAGTGGGAAGGTTGAGCCCGGGAAGCGGAAAGTAGAAGGGGAAGAGAATTTGGGACCTGCAAAAAAGAGCAAGAGCGGAGGGGAAGTAGGTACGGGAGGTTTTAAGGTCTTGTCATCAGATCCTACTAGTCATTTGGAAGTTAAAAGGGCATCTAATGGCATTGACGGTATAGCAACTGGAGATGCCTCTGAAAGATTTGCTGACCGTGAAGCTCAGAAATTTCGATTCCTTAGAGAAGGTCGCCGGGATGCCAAAAGAAGACGTCCAGGGGATGAAAATTATGATCCAAGAACTCTATACTTGCCTCCTGATTTCTTAAAGAGTTTGTCAGATGGTCAGAAACAATGGTGGGAGTTCAAGTCAAAAAATATGGACAAAGTTCTGTTTTTCAAGATGGGTAAATTTtatgaactttttgaaatggATGCACATGTAGGAGTGAAAGAGCTTGACTTGCAGTATATGAAGGGAGAACAACCTCATTGTGGATTTCCAGAGAGGAATTTTTCGATGAATGTGGAGAAACTGGCTAGGAAGGGTTATCGAGTTCTTGTTGTAGAGCAAACTGAAACGCCTGAACAACTGGAGCTTCGCCGAAAAGAGAAGGGATCTAAAGATAAGGTCCAATTCTATCCTACCGTTGTGAGACGTGAAATATGTGCAGTGGTTACAAAAGGAACATTAACTGATGGAGAGTTGCTGTCGGCAAACCATGAAGCTTCATATTTAATGGCATTGATTGAAGACCATCAAGACCAGGCAAATGAGACTTCAGAGCGCATTTATGGTGTTTGTGTAGTTGATGTTGCCACGAGCAGAGTTATTCTCGGACAGTTTAAGGATGACTCAGAGTGCAGTACCTTGTGCTCTATATTGTCTGAGCTCAGGCCAGTTGAAATTGTGAAACCTGCTAAACTTCTCAGCACTGAAACAGAAAGAACACTGCTGAAGCATACAAGAAATCCTCTAGTGAATGAATTAGTTCCAGTTGTGGAGTTCTGGAATGCTGAGAAAACTGTCGATGAAGTGAAGAGAATTTACAGACTTACTGATGGTTCTGttgttgatgatgatggttTAAGCGGCCTGCCTGACGTTTTGCTGGAGCTGGTGAAAGAAGGTGATAATAGTAGAAGTGCACTTTCAGCACTTGGTGGTGCTCTTTATTATCTGAAGCAGGCTTTCCTAGACGAGACGCTGCTTAGATTTGCGCGGTTTGAGTTACTTCCATGTTCTGGTTTCAATGATCTTGGTTCAAAGCCATACATGGTTCTTGATGCTGCAGCCTTGGAGAATCTTGAGATTTTTGAGAATAGCAGAAATGGAGATTCTTCGGGCACGCTCTATGCACAATTAAACCAATGTGTTACTGCATTTGGAAAGAGACTGCTGAAGACTTGGCTTGCAAGACCTTTATGTCATATAGAATCAATCAAGGAACGGCAAGAAGCTGTGGCAGGTTTGAGGGGAGTTAATTTACCCTTTGCACTAGAATTTCGGAAGGCATTAGCAAAGCTACCAGACATGGAGCGTTTGCTTGCACGGAACTTTTCTAGTAGCAAAGCTAGTGGAAGGAATGCTTATAAAGTTGTTCTGTATGAGGATGCAGCAAAGAAACAACTGCAAGAGTTTATTTCAGCCCTGCGTGGGTGTGAACTAATGGCTAAAGCATGTGCTTCACTTGGTACCATTTTGAATGATGTTGACTCCAAACAACTTCATCGTCTGTTAACACCTGGTGAAGATCTTCCTGATGTCTGTATGCTTCTTACCCATTTTAAGGATGCATTTGATTGGGTGGAAGCCAATAACTCTGGACGTATAATACCTCATGAAAGTGTTGATATTGAGTATGACTCCGCCTGTAAAACAGTTAAGGAGATTGAATATCGTTTATCGAAGCATCTTAAGGAACAGAGGAAATTACTTGGAGACAGCTCGATCACCTATGTCTCTGTTGGAAAGGAAGCATACCTATTGGAAGTTCCAGAAAGTATAAGAGGAAATATTCCTCAAAATTATGAATTGCGATCTTCAAGAAAAGGCTTCTTCAGATACTGGACTCCAGATATCAAAAAGTTATTGAGTCAGCTCTCCCAAGCTGAATCTGAAAAGGAGTCATCATTGAAAAGTATATTGCAGAGATTGATTGGGCGTTTTTGTGAACATCATACTAAGTGGAGGCAGTTGGTATCTGCAACTGCTGAGCTGGATGTTTTGATCAGTTTAGCTATTGCTAGTGACTACTATGAAGGACCGACATGCCGACCAAAAGTATTAAGCTCTTTATGTACGAAAGAAGCTCCATGCCTCGCTGCTAAAAGTTTGGGACACCCAGTGCTCAGGAGTGATTCTTTGGGCAAGGGCACTTTTGTACCCAATGACATCACAATTGGTGGTTCACAGCAGGCCAGCTTCATACTTCTAACTGGCCCTAATATGGGTGGAAAGTCAACTCTTCTTCGCCAAGTTTGCTTGGCTGTGATTTTGGCCCAGGTAGGGGCTGATGTCCCAGCAGAAAGTTTTGATTTATCACCTGTTGACCGAATTTTTGTTCGAATGGGTGCCAAAGATAATATCATAGCAGGCCAAAGTACTTTTTTTACCGAGCTTTCGGAAACTGCAACAATGCTGTCATCAGCTACACGTAATTCGTTGGTGGCATTGGATGAGCTTGGACGTGGGACCTCAACTTCTGATGGGCAAGCAATTGCGGAATCAGTACTTGAACATCTTGTGCGGAAGGTGCAGTGTCGTGGATTGTTTTCTACTCATTATCACCGATTAGCTATAGATTTCAACAAAGACCCCAAGGTCTCTCTCTGCCATATGGCATGCCAAGTCGGTAATGTAGCTGCAGGTGTGGATGAAGTCACATTTCTTTACAGGCTAACCCTAGGTGCATGTCCTAAGAGCTATGGTGTTAATGTTGCTCGTATAGCTGGACTTCCTGTCTCTGTGCTTAACAAGGCTGCTGCTAAGTCCAGAGAATTTGAGTCCACATATGGTAAATACAGAAAGGCATATTCTGAAAAAGACTCTTCCGATCGAAATTTGGTGAATGAGATGGTGGTCATCATACAAAAATTGACCAATTCTGCTACAGATTTGAGTTGCCAGGAGTCCATTTGCAGTGGTTCCCTAACTGAACTTCAGGGTAGAGCAAGAGAACTCCTGCagctatattaa 3858 0.4279 MAPSRRQSNGRSPLVNQQRQITSFFSKSTSSSSPPPTNSNQKLNISDPNPTPSPATPSPPDHKPLLIIGASSLPSPFCSSYGDKQLNGQEVVGRRIKVYWPLDKAWYEGCVKSFDEVTGKHLVLYDDDEEETLDIAEEKIEWVQETAKKLKRLRRHGFADIRKMVIEDEDGAENEDGKVDECRGGDNSCEDWRKKEVVEEGEEYMKLEKKDEEDITEGPNGKRSGKVEPGKRKVEGEENLGPAKKSKSGGEVGTGGFKVLSSDPTSHLEVKRASNGIDGIATGDASERFADREAQKFRFLREGRRDAKRRRPGDENYDPRTLYLPPDFLKSLSDGQKQWWEFKSKNMDKVLFFKMGKFYELFEMDAHVGVKELDLQYMKGEQPHCGFPERNFSMNVEKLARKGYRVLVVEQTETPEQLELRRKEKGSKDKVQFYPTVVRREICAVVTKGTLTDGELLSANHEASYLMALIEDHQDQANETSERIYGVCVVDVATSRVILGQFKDDSECSTLCSILSELRPVEIVKPAKLLSTETERTLLKHTRNPLVNELVPVVEFWNAEKTVDEVKRIYRLTDGSVVDDDGLSGLPDVLLELVKEGDNSRSALSALGGALYYLKQAFLDETLLRFARFELLPCSGFNDLGSKPYMVLDAAALENLEIFENSRNGDSSGTLYAQLNQCVTAFGKRLLKTWLARPLCHIESIKERQEAVAGLRGVNLPFALEFRKALAKLPDMERLLARNFSSSKASGRNAYKVVLYEDAAKKQLQEFISALRGCELMAKACASLGTILNDVDSKQLHRLLTPGEDLPDVCMLLTHFKDAFDWVEANNSGRIIPHESVDIEYDSACKTVKEIEYRLSKHLKEQRKLLGDSSITYVSVGKEAYLLEVPESIRGNIPQNYELRSSRKGFFRYWTPDIKKLLSQLSQAESEKESSLKSILQRLIGRFCEHHTKWRQLVSATAELDVLISLAIASDYYEGPTCRPKVLSSLCTKEAPCLAAKSLGHPVLRSDSLGKGTFVPNDITIGGSQQASFILLTGPNMGGKSTLLRQVCLAVILAQVGADVPAESFDLSPVDRIFVRMGAKDNIIAGQSTFFTELSETATMLSSATRNSLVALDELGRGTSTSDGQAIAESVLEHLVRKVQCRGLFSTHYHRLAIDFNKDPKVSLCHMACQVGNVAAGVDEVTFLYRLTLGACPKSYGVNVARIAGLPVSVLNKAAAKSREFESTYGKYRKAYSEKDSSDRNLVNEMVVIIQKLTNSATDLSCQESICSGSLTELQGRARELLQLY 1285
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Sto8g0425 1285 SUPERFAMILY DNA repair protein MutS, domain II 460 661 IPR036678 GO:0005524|GO:0006298|GO:0030983
Sto8g0425 1285 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 991 1223 IPR027417 -
Sto8g0425 1285 MobiDBLite consensus disorder prediction 203 269 - -
Sto8g0425 1285 Pfam MutS family domain IV 837 927 IPR007861 GO:0005524|GO:0006298|GO:0030983
Sto8g0425 1285 MobiDBLite consensus disorder prediction 203 244 - -
Sto8g0425 1285 Gene3D DNA repair protein MutS, domain I 291 458 IPR016151 GO:0005524|GO:0006298|GO:0030983
Sto8g0425 1285 SMART DNAend 666 1007 IPR007696 GO:0005524|GO:0006298|GO:0030983
Sto8g0425 1285 Pfam MutS domain III 652 967 IPR007696 GO:0005524|GO:0006298|GO:0030983
Sto8g0425 1285 MobiDBLite consensus disorder prediction 1 66 - -
Sto8g0425 1285 Gene3D - 978 1255 IPR027417 -
Sto8g0425 1285 SUPERFAMILY Tudor/PWWP/MBT 91 132 - -
Sto8g0425 1285 Coils Coil 914 934 - -
Sto8g0425 1285 Gene3D - 646 967 - -
Sto8g0425 1285 Pfam MutS domain I 336 454 IPR007695 GO:0005524|GO:0006298|GO:0030983
Sto8g0425 1285 SUPERFAMILY DNA repair protein MutS, domain I 321 450 IPR016151 GO:0005524|GO:0006298|GO:0030983
Sto8g0425 1285 SUPERFAMILY DNA repair protein MutS, domain III 649 973 IPR036187 -
Sto8g0425 1285 SMART mutATP5 1027 1219 IPR000432 GO:0005524|GO:0006298|GO:0030983
Sto8g0425 1285 Gene3D MutS, connector domain 463 642 IPR036678 GO:0005524|GO:0006298|GO:0030983
Sto8g0425 1285 Gene3D - 84 142 - -
Sto8g0425 1285 PIRSF Msh6 1 1268 IPR017261 GO:0006298|GO:0030983
Sto8g0425 1285 PANTHER DNA MISMATCH REPAIR PROTEIN MSH6 302 1243 - -
Sto8g0425 1285 Gene3D - 805 943 - -
Sto8g0425 1285 MobiDBLite consensus disorder prediction 1 49 - -
Sto8g0425 1285 Pfam MutS domain II 464 617 IPR007860 GO:0005524|GO:0006298|GO:0030983
Sto8g0425 1285 PANTHER DNA MISMATCH REPAIR PROTEIN MUTS FAMILY MEMBER 302 1243 IPR045076 GO:0005524|GO:0006298|GO:0030983|GO:0140664
Sto8g0425 1285 Coils Coil 133 153 - -
Sto8g0425 1285 Pfam MutS domain V 1031 1221 IPR000432 GO:0005524|GO:0006298|GO:0030983
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Sto8g0425 Sto-Chr8 2648279 2656614 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Sto8g0425 K08737 - gmx:100811104 1840.08
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Sto8g0425 8 2648279 2656614 Sto8g0425 8 2648279 2656614 ECH