Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Sto8g0396 ATGGCAAATAGACCTGATCCTGATATTGACGACGACTTTAGTGAGCTTTACAAGGAATACACCGGTCCTCCAGGAACAGCTACTACTAATACCCAAGAAAAGGCAAAGTCAAACAAGAGGTCTCATGCAGGTTCAGACGAGGAGGAAGAAACTCGTGACCCCAATGCAGTCCCAACTGATTTTACTAGCCGAGAAGCTAAGGTTTGGGAGGCTAAGTCAAAGGCTACTGAGAGGAATtggaagaaaaggaaagaagaagaattaatcTGCAAAATCTGTGGTGAATCAGGGCATTTCACTCAGGGTTGTCCATCCACACTAGGAGCCAATCGCAAGTCTCAAGATTTCTTTGAAAGGATTCCGGCAAGAGACAAAAATATTAGAGCAATTTTTACAGAAAAAGTTTTAAGCAAGATTGAAAGAGATATTGGCTGTAAAATTAAGATGGATGAGAAATTTATTATTGTCAGTGGTAAGGATAGACTGATTTTGGCAAAAGGCGTTGATGCTGTGCACAAGATTAGAGAGGACGGTAATCAGAGGGGCTCTTCAAGTTCTCACTTGACCAGATCTAGGTCACCTGAGAGAAGTCCTGTTGGTTCACGGTTTCAGCGTTCTGAGCCCCAAAGGTCTCATTCTGGTCCTCGAAATACTTCCCATTTTCAACAAAGGTTTGGTAGGCAAGAGAGGGTTGTTGAAGACCGTATGAGAGAGGAGTTTCAAAAATTTCCAAGAGATTCTCCACAAGGTAGGGACAGCATAGGATTTGTTTACGACATCCTTAGAAACCTGCATTTTAATAATGTTGCTCTTGCTTATAATTTGCTTGCAGCAAGAGCTTATGAAAATAGTGGAGCCCGAGGCCGTTCAAGCCATTCAAGATCTCCAAGACAAGCACCTTATACAGGAAACtcatataattcatatgatGCCCGTAATCAAAACATGGGCTCATATAGAGATGGGTGGGATTCACATAGGAGAGAATCTGATATTCAGTCCGGTCATCAACTTGATTACAAAGCCTTCCCACAAACATTAGAAGAATTAGAGATGGAGTATAAGAGGGAGGCCACAGAGCTTGTGAAAATCCGAgacagagaagaagatgaagaaatttTCAAACATCGTGAGGCTATTAGAGATATGAGGGAGAACTACGTGAACAAAGTTGCTATGCTGAGGGCTGCACATTCCAAACAGTGGGAAGAATTTCTTCAGCTTGATGCGCAGAGGCGTCAACAGCAGGCTATCCAACAAATGCCTAGTTCCGGTTTTGGGGGTTATAAACAGCAGAACTTTTCTGAATATGATGGTCCCACAGCCAATCCTCACTATACTGGAGCCAATTTACCGTTGGAATTGAGGAACAGATTCCCTGACACTGTGGAAAACTTTCCTTCTAGGCGTCATGATAATTTTGGTGAATTTCAAAGGCGTGGAGATTTTGCAAAAGCTTACGACAGATATTAA 1473 0.408 MANRPDPDIDDDFSELYKEYTGPPGTATTNTQEKAKSNKRSHAGSDEEEETRDPNAVPTDFTSREAKVWEAKSKATERNWKKRKEEELICKICGESGHFTQGCPSTLGANRKSQDFFERIPARDKNIRAIFTEKVLSKIERDIGCKIKMDEKFIIVSGKDRLILAKGVDAVHKIREDGNQRGSSSSHLTRSRSPERSPVGSRFQRSEPQRSHSGPRNTSHFQQRFGRQERVVEDRMREEFQKFPRDSPQGRDSIGFVYDILRNLHFNNVALAYNLLAARAYENSGARGRSSHSRSPRQAPYTGNSYNSYDARNQNMGSYRDGWDSHRRESDIQSGHQLDYKAFPQTLEELEMEYKREATELVKIRDREEDEEIFKHREAIRDMRENYVNKVAMLRAAHSKQWEEFLQLDAQRRQQQAIQQMPSSGFGGYKQQNFSEYDGPTANPHYTGANLPLELRNRFPDTVENFPSRRHDNFGEFQRRGDFAKAYDRY 490
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Sto8g0396 490 Coils Coil 347 367 - -
Sto8g0396 490 MobiDBLite consensus disorder prediction 286 320 - -
Sto8g0396 490 MobiDBLite consensus disorder prediction 35 55 - -
Sto8g0396 490 PANTHER OS01G0252900 PROTEIN 1 488 - -
Sto8g0396 490 MobiDBLite consensus disorder prediction 1 65 - -
Sto8g0396 490 MobiDBLite consensus disorder prediction 285 335 - -
Sto8g0396 490 ProSiteProfiles Zinc finger CCHC-type profile. 90 105 IPR001878 GO:0003676|GO:0008270
Sto8g0396 490 SUPERFAMILY Retrovirus zinc finger-like domains 77 109 IPR036875 GO:0003676|GO:0008270
Sto8g0396 490 MobiDBLite consensus disorder prediction 175 231 - -
Sto8g0396 490 MobiDBLite consensus disorder prediction 181 225 - -
Sto8g0396 490 PANTHER OS01G0252900 PROTEIN 1 488 - -
Sto8g0396 490 MobiDBLite consensus disorder prediction 321 335 - -
Sto8g0396 490 MobiDBLite consensus disorder prediction 1 17 - -
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Sto8g0396 - - gmx:100806099 752.666
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Sto8g0396 8 2498310 2501185 Sto8g0396 8 2498310 2501185 ECH