LGRPv2

Gene search

Sequence information

Select	Gene	Cds	Cds_length	GC_content	Pep	Pep_length
	Sto8g0379	ATGGGAGTGGGAAATAGATTCAATGCCGTGAATATGCTGCTAAGAAGCAATATTTATGAACTTGAAATAGCTGCTGGTTTTGAAGTTTCCAAAGCCCAAGCCCAGAAATTTGACGATGCCATGCTATTTCAAGCGCCACGTATCCATTCCCGTCCATGCGTTTCTTGGCCGCGTTATACACAGTCAGTTAGACGGTTACAACTTACAGTTCTTCTCCTTCGCTCTGAGAAGCTCTGTATCTGCTGCTTCAGCGTTAAGGGAAACATGACTTCTACCATGCCCACACTGCACTCCTTTACTCTTCCAAATTCTCATCTCAAACTTCCTTTTGGAGATTTCAGGTCGTCTCCCAAGAGTTTCCGTGTTCCACAATTTTCTCTGCTCCCTCTATCTCACAAAGGCAATGCCGCGATTCTTCCCAAAACCAGAGCCCAGAATCTTTCTGATCTGAATACCGACTTTGACCTTGATACTTCGTTCTCTTTGCTTTCTTTTCCGGATACACTCAAAGTCGCAGATGACGTTCCGGATTCCAAGTTTTACAAAGTGGAAGCGTTTATCAGGCCTTGGCGACTTCCCCAGCTTGCTTCGGCTTTGTTGAAAATGGGAATCGATGGTTTCACGGTATCTGATGTCAGGGGAACTCCGGGTCGTATAAGGTCGAGGCAGAGAGGCTCTACAGACATTTTGATTGCCAAAGTTAAGATGGAAATAGTAGTGAGCAAGAATCAGGttgatacaataataaacaaGATTATCGATGTGACATGGACTGGGGAGATTGATGATGGCAAAATTTTCCtgaTACCTGTGTCAGATGTTATAAAAATTCGTACAGGTGAGCGAGGGGAAATGATGGAGAGCGTGACCGATGGGGCAGCTTCTGCTGTATGA	894	0.443	MGVGNRFNAVNMLLRSNIYELEIAAGFEVSKAQAQKFDDAMLFQAPRIHSRPCVSWPRYTQSVRRLQLTVLLLRSEKLCICCFSVKGNMTSTMPTLHSFTLPNSHLKLPFGDFRSSPKSFRVPQFSLLPLSHKGNAAILPKTRAQNLSDLNTDFDLDTSFSLLSFPDTLKVADDVPDSKFYKVEAFIRPWRLPQLASALLKMGIDGFTVSDVRGTPGRIRSRQRGSTDILIAKVKMEIVVSKNQVDTIINKIIDVTWTGEIDDGKIFLIPVSDVIKIRTGERGEMMESVTDGAASAV	297

Annotation information

Select	Seq ID	Length	Analysis	Description	Start	End	IPR	GO
	Sto8g0379	297	Gene3D	-	170	296	IPR015867	-
	Sto8g0379	297	PRINTS	P-II protein signature	181	196	IPR002187	GO:0006808\|GO:0030234
	Sto8g0379	297	PRINTS	P-II protein signature	202	220	IPR002187	GO:0006808\|GO:0030234
	Sto8g0379	297	PRINTS	P-II protein signature	227	250	IPR002187	GO:0006808\|GO:0030234
	Sto8g0379	297	PRINTS	P-II protein signature	258	278	IPR002187	GO:0006808\|GO:0030234
	Sto8g0379	297	ProSiteProfiles	P-II protein family profile.	180	287	IPR002187	GO:0006808\|GO:0030234
	Sto8g0379	297	PANTHER	NITROGEN REGULATORY PROTEIN P-II HOMOLOG	178	294	-	-
	Sto8g0379	297	Pfam	Nitrogen regulatory protein P-II	181	283	IPR002187	GO:0006808\|GO:0030234
	Sto8g0379	297	SUPERFAMILY	GlnB-like	182	284	IPR011322	-
	Sto8g0379	297	PANTHER	NITROGEN REGULATORY PROTEIN P-II	178	294	IPR002187	GO:0006808\|GO:0030234
	Sto8g0379	297	SMART	P_II_3	183	280	IPR002187	GO:0006808\|GO:0030234

Duplication type information

Select	Gene	Chromosome	Start	End	Duplicated_type
	Sto8g0379	Sto-Chr8	2414465	2423636	Wgd

Pathway information

Select	Query	KO	Definition	Second KO	KEGG Genes ID	GHOSTX Score
	Sto8g0379	-		-	vun:114164102	162.54

Event-related genes

Select	Gene_1	Chr_1	Start_1	End_1	Gene_2	Chr_2	Start_2	End_2	Event_name
	Sto8g0379	8	2414465	2423636	Sto8g0379	8	2414465	2423636	ECH