Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Sto8g0358 ATGGCTAACCCAACACAACCAGATGTTGGGTCCTCCCTCACTATGTCCCCTTCAAACCCTGACAGACAGAGCCCTTACCCTGAGAAGAGTCCAATTCTCCCTCCTCCTTCGGGTTTTGCAGCAGCACCTAGGTTTCCTCCACCAAAATTACAACAAGAtcaggcttcttctccttccatcAAAACCCCAAACGTTTTATCACCAGCCAATGGTATAAAAACTGGCAGTTCTGTTCCTCATTTGAGCACCCCTCCTGGACCTCCTGTATTTACTTCACCTGTTCGTCCTGCTGCTGTCCCTTTTCGCACATCACCTGCGTCACCTCAGCCAGTTGCGTTATCTTCGGGTTCATCTCTACCAACATCATCACCTCCTAAATTTTCAAACGGGTCATTTGAGTTGCAGCACCAAGTTTCTTCCGGAGCAGAAGACCAAGTTCCTGTTGGGGAGTcttcttttgttcttttctcAGCTCATAAGGTATTGAAACAGAAGAAACTAGCAAATGTACccagtttgggttttggggcgCTAGTCTCTCCTGGGAAGGAGATCTCATCAGGCCCTCAAGTAATTCAGCGCGATCCCCATCGCTGTCAAAGCTGTGGAGCTTATGCAAACATCTATTGCAATATATTACTTGGATCAGGCCAATGGCAGTGTGTAATATGTCGGAAACTGAATGGAAGTGATGGAGAGTACATTGCTCTCAACAAGGAAGACCTGTGCAGGTTTCCAGAATTATCATCACCCATGGTTGATTATATTCAAACGGGGAATAAGAGACCTGGTTTTGTTCCGGTTTCAGATTCAAGAATGTCTGCACCAGTTGTTCTTGTAATTGATGAATGTTTAGATGAACCTCACTTACATCATCTACAGAGCTCATTACATGCTTTTGTTGATTCGCTTCCCCCTACGACAAGAATAGGCATTGTACTATATGGCCGTACAGTATCTGTTTATGACTTTTCGGAGGAGTCAGTGGCATCTGCTGATGTGCTTCCTGGGGATAAATCACCAACTCAAGAATCCTTGAAAGCATTGATCTATGGTACTGGTATATACCTGTCACCAATGCATGCTTCGCTTCCTGTAGCACATTCCATATTTTCATCACTGAGGCCATACAAGTTGAACATGCCTGAAGCTTCCAGAGATCGGTGTCTAGGTACTGCTGTTGAGGTTGCTCTTGCTATAATTCAGGGACCTTCTGCAGAACTGTCCCGAGGGGTAGTCAAAAGGTCAGGGGGCAATAGCAGGATTATTGTGTGTGCTGGTGGACCCAACACCTATGGCCCAGGATCAGTTCCTCATTCTTTTGGTCACCCTAATTATCCACATATGGAAAAGACTGCATTGAAATGGATGGAGAATCTAGGCCGTGAGGCTCATCGTCACAATACTGTGGTTGACATTTTATGTGCTGGAACATGCCCTGTCAGAGTTCCTATTTTGCAGCCTCTTGCAAAAGCATCAGGTGGCGTTTTGGTTCTCCATGATGATTTCGGGGAAGCCTTTGGTGTTAATTTGCAAAGGGCATCCGCCAGAGCAGCTGGTTCTCATGGTTTGTTGGAATTACGGATGTCTGATGATATTCTCATAACTCAAGTTGTGGGTCCTGGTGAAGAGGCACATGTGGATACCCATGAATCTTTTAAAAATGACACTGCTCTTTATATTCAAATGCTGAgtgttgaagaaactcagagcTTCTCTCTCTCCATGGAAAATAAAGGAGATATAAAAAGTGATAGTGTATTTTTCCAGTTTGCAATTCAGTATTCAAATGTGTATCAAGCTGATGTATCAAGGGTTATTACAGTTAGACTGCTGACTGTAGATAGTATTTCAGGATATCTTGAAAGTGTTCAAGATGAAGTTGCAGCTGTCCTCATTGCAAAGAGGACTCTGTTACGAGCCAAAAACAGTTCTGATGCAATTGACATGCGAGCCACTGTGGATGAAAGAATCAATGATATTGCTCTGAAATTTGGCTCCCAATTACCCAAGTCAAAATTTCGCCGATTCCCAAAGGAGTTATCTTTCTTACCTGAGCTCCTTTTCCATCTTAAAAGAGGACCACTGTTAGGAAGCATTATTGGTCATGAAGATGAGAGGTCTGTGCTGCGGGAGCTGTTTCTAAATGCATCCTTTGATCTATCACTCCGAATGGTTGCTCCTCGTTGTTTAATGCACAGGGAAGGGGGAACTTTTGAGGAGCTACCAGCTTATGATCTTGCTATGCAGTCTGATGCTGCTGTTGTTCTTGATCACGGCACCGATGTCTTCATTTGGTTGGGTGCTGAACTAGCAGCTGATGAAGGAAGAAGTGCTGCTGCTTTAGCTGCTTGCCGGACTTTGGCTGAGGAGCTTACTGAATTGCGTTTTCCAGCTCCTCGTATCCTTGCATTTAAGGAGGGTAGCTCACAGGCCCGTTATTTTGTTTCTCGTCTCATTCCAGCACACAAGGATCCTCCTTATGAGCAGGAGGCAAGATTCCCACAACTGAGGTCATTGACATCAGAGCAGCGGACAAAGCTAAAAAGCAGTTTTATTCACTTCGATGATCCTAGTTTATGCGAGTGGATGAAAAGTTTGAAAGTGGTCGGACACAGTAGCTGA 2625 0.432 MANPTQPDVGSSLTMSPSNPDRQSPYPEKSPILPPPSGFAAAPRFPPPKLQQDQASSPSIKTPNVLSPANGIKTGSSVPHLSTPPGPPVFTSPVRPAAVPFRTSPASPQPVALSSGSSLPTSSPPKFSNGSFELQHQVSSGAEDQVPVGESSFVLFSAHKVLKQKKLANVPSLGFGALVSPGKEISSGPQVIQRDPHRCQSCGAYANIYCNILLGSGQWQCVICRKLNGSDGEYIALNKEDLCRFPELSSPMVDYIQTGNKRPGFVPVSDSRMSAPVVLVIDECLDEPHLHHLQSSLHAFVDSLPPTTRIGIVLYGRTVSVYDFSEESVASADVLPGDKSPTQESLKALIYGTGIYLSPMHASLPVAHSIFSSLRPYKLNMPEASRDRCLGTAVEVALAIIQGPSAELSRGVVKRSGGNSRIIVCAGGPNTYGPGSVPHSFGHPNYPHMEKTALKWMENLGREAHRHNTVVDILCAGTCPVRVPILQPLAKASGGVLVLHDDFGEAFGVNLQRASARAAGSHGLLELRMSDDILITQVVGPGEEAHVDTHESFKNDTALYIQMLSVEETQSFSLSMENKGDIKSDSVFFQFAIQYSNVYQADVSRVITVRLLTVDSISGYLESVQDEVAAVLIAKRTLLRAKNSSDAIDMRATVDERINDIALKFGSQLPKSKFRRFPKELSFLPELLFHLKRGPLLGSIIGHEDERSVLRELFLNASFDLSLRMVAPRCLMHREGGTFEELPAYDLAMQSDAAVVLDHGTDVFIWLGAELAADEGRSAAALAACRTLAEELTELRFPAPRILAFKEGSSQARYFVSRLIPAHKDPPYEQEARFPQLRSLTSEQRTKLKSSFIHFDDPSLCEWMKSLKVVGHSS 874
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Sto8g0358 874 SUPERFAMILY Helical domain of Sec23/24 626 726 IPR036175 GO:0006886|GO:0006888|GO:0030127
Sto8g0358 874 MobiDBLite consensus disorder prediction 1 25 - -
Sto8g0358 874 PANTHER PROTEIN TRANSPORT PROTEIN SEC23 63 871 - -
Sto8g0358 874 MobiDBLite consensus disorder prediction 1 143 - -
Sto8g0358 874 Pfam Sec23/Sec24 beta-sandwich domain 522 611 IPR012990 -
Sto8g0358 874 Pfam Sec23/Sec24 trunk domain 278 504 IPR006896 GO:0006886|GO:0006888|GO:0030127
Sto8g0358 874 Pfam Sec23/Sec24 zinc finger 196 234 IPR006895 GO:0006886|GO:0006888|GO:0008270|GO:0030127
Sto8g0358 874 MobiDBLite consensus disorder prediction 27 43 - -
Sto8g0358 874 Gene3D von Willebrand factor, type A domain 276 521 IPR036465 -
Sto8g0358 874 SUPERFAMILY C-terminal, gelsolin-like domain of Sec23/24 728 868 IPR036180 -
Sto8g0358 874 MobiDBLite consensus disorder prediction 50 80 - -
Sto8g0358 874 SUPERFAMILY Zn-finger domain of Sec23/24 186 260 IPR036174 GO:0006886|GO:0006888|GO:0008270|GO:0030127
Sto8g0358 874 MobiDBLite consensus disorder prediction 107 143 - -
Sto8g0358 874 PANTHER PROTEIN TRANSPORT PROTEIN SEC23 63 871 IPR037364 -
Sto8g0358 874 SUPERFAMILY beta-sandwich domain of Sec23/24 22 624 - -
Sto8g0358 874 Gene3D Severin 742 838 IPR029006 -
Sto8g0358 874 Gene3D Sec23/Sec24 helical domain 615 734 - -
Sto8g0358 874 SUPERFAMILY vWA-like 277 509 IPR036465 -
Sto8g0358 874 CDD gelsolin_like 728 819 - -
Sto8g0358 874 Pfam Sec23/Sec24 helical domain 627 723 IPR006900 GO:0006886|GO:0006888|GO:0030127
Sto8g0358 874 CDD trunk_domain 270 513 - -
Sto8g0358 874 Gene3D - 186 249 - -
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Sto8g0358 - - gmx:100781518 1538.47