Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Sto8g0352 ATGGCATCCTCCTTCTTGATCTCTATCTTGTTCCTCTGCTCCACATATTTTGTAGCAGAAGCAAGAGGAAGAGAGTCAGCCTTCATACCCATATCTTCTCTGGTCACCAAAAaccttttcaattcaattttccTACACAAAGACGACGCCGCATGCCCTGCCAAAGACTTCTACACCTACGAGTCATTCATTCACGCGACCAAATGCTTCCCTGCATTTGGTAGCAGAGGAAGCTTAACCACACGGAAGCGTGAGATTGCTGCATTTCTGGCTCAAATCTCCCATGAAACCACCGGTGGCTGGTCCACTGCACCAGACGGACCCTTCTCTTGGGGCCTTTGCTTCAAAGAAGAAATTAATCCCCAATCTGATTACTGTGACTCCACCAATACACAATGGCCTTGCTACCCTGGCAAAAGATACTACGGCAGAGGACCCATTCAACTTTCTTGgaaTTCCAACTATGGGCCAGCTGGGAAGGCTCTGGGATTTGATGGTTTGAAGAATCCTGAAATTGTAGCGAATAACTCTGTGATTGCATTCAAAACGGCTCTGTGGTTTTGGATGACAGAGAGAAAGCCCGTACCTTCTTGCCACGATGTGATGGTTGGGAGATACGTGGCAACAGAAGCTGATATAGCGGCCAATCGGACGGCTGGTTTTGGCTTGGTTACAAACATAATCAACGGCGGATTGGAGTGTGGGATTCCTGGTGATGCGAGAGTGAATGATCGGATTGGATTCTTTCAGAGATATGTCAAATTGTTCAACGTAGATACGGGACCTAACTTGGATTGTGCATATCAGAAATCCTTCTGA 819 0.4579 MASSFLISILFLCSTYFVAEARGRESAFIPISSLVTKNLFNSIFLHKDDAACPAKDFYTYESFIHATKCFPAFGSRGSLTTRKREIAAFLAQISHETTGGWSTAPDGPFSWGLCFKEEINPQSDYCDSTNTQWPCYPGKRYYGRGPIQLSWNSNYGPAGKALGFDGLKNPEIVANNSVIAFKTALWFWMTERKPVPSCHDVMVGRYVATEADIAANRTAGFGLVTNIINGGLECGIPGDARVNDRIGFFQRYVKLFNVDTGPNLDCAYQKSF 272
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Sto8g0352 272 CDD chitinase_GH19 35 266 - -
Sto8g0352 272 PANTHER OS05G0138200 PROTEIN 16 272 - -
Sto8g0352 272 PIRSF Endochitinase 11 272 IPR016283 GO:0004568|GO:0005975
Sto8g0352 272 Gene3D - 38 272 - -
Sto8g0352 272 ProSitePatterns Chitinases family 19 signature 2. 179 189 IPR000726 GO:0004568|GO:0006032|GO:0016998
Sto8g0352 272 Gene3D Endochitinase, domain 2 117 175 - -
Sto8g0352 272 PANTHER CHITINASE-RELATED 16 272 - -
Sto8g0352 272 SUPERFAMILY Lysozyme-like 31 272 IPR023346 -
Sto8g0352 272 Pfam Chitinase class I 34 266 IPR000726 GO:0004568|GO:0006032|GO:0016998
Sto8g0352 272 ProSitePatterns Chitinases family 19 signature 1. 52 74 IPR000726 GO:0004568|GO:0006032|GO:0016998
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Sto8g0352 Sto-Chr8 2213375 2214273 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Sto8g0352 4 272 Glycoside Hydrolase AT1G02360 68.773 1.07e-144 407
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Sto8g0352 - - gmx:100784196 459.144