Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Sto8g0345 ATGGATACCGCTCGCAGGAACGATGGAGCCATGTACGAGTGCTTGCTTTTCGATATGGATGACACTCTCTATCCATTGAGCACAGGTCTCAATCTGGCATGTCGCAAGAACATACAAGATTACATGTTGGAACACTTGCATATGGAAGAAAGTCAAGTTCCTAAGATGTGTCTGGATTTGTATAAAGAATATGGGACGACTATGGCTGGACTTAAGGCCCTTGATTATGAATTCGACAATGATGATTTTCATGCTTACGTGCATGGAAGATTACCATATGACAAATTGAAGCCCGACCTTGTGTTAAGGAATCTTCTGCTTTCTATGCCTCAGCGTAAAATTATTTTCACTAATGCAGATCAAACTCATGCTGTTGAAGTTCTCAAAAGATTGGGCTTGGAGGAATGTTTCGAGGGAATTATAtgctttgaaacactcaatccTCCTAAACAAGTTAACAATGAGAGTGACTCAAGAATCCTCTGCAAGCCCTCTGTGGAAGCCATTGAAGCTGCGATTCGTATTGCTGATGTGGATCCAAAGAAAACAATCTTCTTTGATGACAGTGCTAGAAACATTGCAAGTGGAAAAGTAGCTGGACTTCACACTGTTATCGTTGGGTGTTCAGATTTGGTGCCAGGTGCAGACTATGCCCTGAGAAGCATTCACAATATCAAAGAAGCATTACCAGAATTATGGGAGGCCGAAGAATGCGATGGACACCAAGTGATCAAATCCCCAGCAGTAGAAACCATGGTCCAAGCATAG 768 0.4128 MDTARRNDGAMYECLLFDMDDTLYPLSTGLNLACRKNIQDYMLEHLHMEESQVPKMCLDLYKEYGTTMAGLKALDYEFDNDDFHAYVHGRLPYDKLKPDLVLRNLLLSMPQRKIIFTNADQTHAVEVLKRLGLEECFEGIICFETLNPPKQVNNESDSRILCKPSVEAIEAAIRIADVDPKKTIFFDDSARNIASGKVAGLHTVIVGCSDLVPGADYALRSIHNIKEALPELWEAEECDGHQVIKSPAVETMVQA 255
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Sto8g0345 255 PANTHER HALOACID DEHALOGENASE-LIKE HYDROLASE 7 255 - -
Sto8g0345 255 TIGRFAM HAD-SF-IA-v3: HAD hydrolase, family IA, variant 3 15 206 IPR006439 -
Sto8g0345 255 SFLD C1.5: HAD, Beta-PGM, Phosphatase Like 8 235 - -
Sto8g0345 255 SFLD C1.5.3: 5'-Nucleotidase Like 8 235 IPR010237 -
Sto8g0345 255 Pfam Haloacid dehalogenase-like hydrolase 15 206 IPR041492 -
Sto8g0345 255 Gene3D - 75 233 IPR023214 -
Sto8g0345 255 PANTHER OS07G0634400 PROTEIN 7 255 - -
Sto8g0345 255 SUPERFAMILY HAD-like 11 233 IPR036412 -
Sto8g0345 255 TIGRFAM Pyr-5-nucltdase: pyrimidine 5'-nucleotidase 13 206 IPR010237 -
Sto8g0345 255 CDD HAD_5NT 14 207 IPR010237 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Sto8g0345 Sto-Chr8 2160584 2162349 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Sto8g0345 K18551 - gmx:100814291 402.134
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Sto8g0345 8 2160584 2162349 Sto13g3767 13 39394120 39395123 CCT
Sto8g0345 8 2160584 2162349 Sto8g0345 8 2160584 2162349 ECH