Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Sto8g0336 ATGGCTTCCACTCTGCTGCCTCTCATTACTTTGCTTTTAGCTTTCTCCACTTATTCTTTGCAGATCATTGAGGATGAAACAGACCAACTTTCTAGTCTCAAGCTTAATTCTCAAATTCTTCAGGAGTCTATTATTAAACAGATTAATGGAAACCCAAATGCAGGATGGGAGGCTGTCATGAGTCCTCGTTTCTCTAATTATACAGTTGGACAATTTAAGCACCTTCTAGGAGCCAAGCAAACACCTAAAAGGGAACTGAGAAGTGCTTCTGTGAAAACTCATCCAATATCATTAAAATTGCCAAATAAGTTTGATGCTAGAACAGCTTGGTCGCAGTGTAGCACAATTGGAAGAATTCTAGATCAGGGTCACTGTGGTTCTTGTTGGGCATTTGGCGCTGTTGAAGCATTATCAGACCGTTTTTGCATTCATTTTGACATGAATGTATCCCTCTCTGTTAATGATCTTCTCGCATGCTGTGGATTTATGTGTGGATCTGGCTGTAATGGGGGTTATACCTTCAATGCATGGCAATACTTTGTCCACAATGGTGTTGTCACTGAAGAGTGTGACCCATACTTTGATGAGACTGGCTGTTCTCACCCTGGTTGTGAGCCATTATATCCAACTCCCACTTGCTCTAGAAAGTGCGTCAATGGTAACCAGGTCTGGAAGGAGTCAAAACACTATAGTGTTAGTGCATATATGATCAACTCTGATCCTTATGATATCATGGCAGAAATTTATAAGAATGGGCCAGTTGAGGTCTCCTTCACGGTTTATGAGATTGTTGAAGAAGGTGGACTGGTGGAGTTTATGACGTTTGCTATCTCGAAGGGTCTTGTCCTGTCAAATGGAGAGAGGGATAAAGATGAGATAGCTGAAACTGAAGAAGTGACAGATTTTGCTCACTACAAATCAGGAGTTTACAAACACATCACGGGTTACGCAATGGGAGGTCATGCTGTAAAGCTAATTGGGTGGGGAACCACTGATGATGGAGAGGATTATTGGCTTCTGGCAAATCAGTGGAATAGAAGTTGGGGTGATGATGGCTACTTCATGATCAGAAGAGGTACCAACGAGTGTGGTATTGAAGAAGAAGTTGTTGCTGATTCTGATTTCTGA 1128 0.4184 MASTLLPLITLLLAFSTYSLQIIEDETDQLSSLKLNSQILQESIIKQINGNPNAGWEAVMSPRFSNYTVGQFKHLLGAKQTPKRELRSASVKTHPISLKLPNKFDARTAWSQCSTIGRILDQGHCGSCWAFGAVEALSDRFCIHFDMNVSLSVNDLLACCGFMCGSGCNGGYTFNAWQYFVHNGVVTEECDPYFDETGCSHPGCEPLYPTPTCSRKCVNGNQVWKESKHYSVSAYMINSDPYDIMAEIYKNGPVEVSFTVYEIVEEGGLVEFMTFAISKGLVLSNGERDKDEIAETEEVTDFAHYKSGVYKHITGYAMGGHAVKLIGWGTTDDGEDYWLLANQWNRSWGDDGYFMIRRGTNECGIEEEVVADSDF 375
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Sto8g0336 375 Pfam Peptidase family C1 propeptide 40 82 IPR012599 GO:0004197|GO:0050790
Sto8g0336 375 SUPERFAMILY Cysteine proteinases 49 371 IPR038765 -
Sto8g0336 375 PANTHER CATHEPSIN B-LIKE PROTEASE 3 300 371 - -
Sto8g0336 375 PANTHER CATHEPSIN B-LIKE PROTEASE 3 18 262 - -
Sto8g0336 375 PRINTS Papain cysteine protease (C1) family signature 122 137 IPR000668 GO:0006508|GO:0008234
Sto8g0336 375 PRINTS Papain cysteine protease (C1) family signature 321 331 IPR000668 GO:0006508|GO:0008234
Sto8g0336 375 PRINTS Papain cysteine protease (C1) family signature 337 343 IPR000668 GO:0006508|GO:0008234
Sto8g0336 375 PANTHER CYSTEINE PROTEASE FAMILY C1-RELATED 18 262 - -
Sto8g0336 375 PANTHER CYSTEINE PROTEASE FAMILY C1-RELATED 300 371 - -
Sto8g0336 375 ProSitePatterns Eukaryotic thiol (cysteine) proteases cysteine active site. 122 133 IPR000169 -
Sto8g0336 375 SMART pept_c1 100 373 IPR000668 GO:0006508|GO:0008234
Sto8g0336 375 Pfam Papain family cysteine protease 300 371 IPR000668 GO:0006508|GO:0008234
Sto8g0336 375 Pfam Papain family cysteine protease 100 262 IPR000668 GO:0006508|GO:0008234
Sto8g0336 375 ProSitePatterns Eukaryotic thiol (cysteine) proteases histidine active site. 319 329 IPR025660 -
Sto8g0336 375 Gene3D Cysteine proteinases 31 374 - -
Sto8g0336 375 CDD Peptidase_C1A_CathepsinB 101 371 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Sto8g0336 Sto-Chr8 2109849 2115984 Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Sto8g0336 K01363 - gmx:100788988 549.28