Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Sto8g0325 ATGAAGCTTTCACTCTCCCTGCTTCTCCTGGCTCTTCCTCTGCTCTTATTCACCTTCGCCAAAGCAGATCCCGACCTTCTTCAAGACATCTGTGTCGCCGATCTTACCTCCGAGATAAAAGTGAATGGGTTTGTGTGCAAGGACGCTTCAAAGGTGAATGCGTCGGACTTCTTCTCGGACATATTAGCGAAGCCAGGAGCCACCAATAACACCTTTGGCTCATTGGTGACGGGAGCCAACGTTCAGAAAATTCCGGGACTCAACACGCTGGGCGTCTCCCTCTCACGCATTGACTACGCGCCCGGTGGGCTCAACCCACCCCACACGCACCCACGCGCCACCGAGATGGTGTTTGTGCTGGAAGGTGAACTTGATGTGGGATTCATAACGACGTCGAATCAGCTGATATCCAAGCATATTATGAAGGGTGAGATATTTGTGTTCCCAAAAGGCTTGGTTCACTTCCAGAAGAACAATGGGGAAGTGGTCGCTTCTGTAATTGCAGCCTTCAATAGTCAGTTGCCTGGCACACAGTCTATCGCCACCACCTTGTTCGCCGCCACGCCGCCCGTGCCGGACAATGTTCTGACCAAGGCATTCCAGATCGGTACAAAGGAGGTTGAGAAAATCAAGTCTAGGCTTGCACCCAAGAAATAA 657 0.516 MKLSLSLLLLALPLLLFTFAKADPDLLQDICVADLTSEIKVNGFVCKDASKVNASDFFSDILAKPGATNNTFGSLVTGANVQKIPGLNTLGVSLSRIDYAPGGLNPPHTHPRATEMVFVLEGELDVGFITTSNQLISKHIMKGEIFVFPKGLVHFQKNNGEVVASVIAAFNSQLPGTQSIATTLFAATPPVPDNVLTKAFQIGTKEVEKIKSRLAPKK 218
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Sto8g0325 218 PRINTS Germin signature 108 128 IPR001929 GO:0030145
Sto8g0325 218 PRINTS Germin signature 138 158 IPR001929 GO:0030145
Sto8g0325 218 PRINTS Germin signature 171 186 IPR001929 GO:0030145
Sto8g0325 218 Gene3D Jelly Rolls 22 216 IPR014710 -
Sto8g0325 218 PANTHER GERMIN-LIKE PROTEIN SUBFAMILY 3 MEMBER 3 16 216 - -
Sto8g0325 218 ProSitePatterns Germin family signature. 103 116 IPR019780 GO:0030145
Sto8g0325 218 SUPERFAMILY RmlC-like cupins 23 213 IPR011051 -
Sto8g0325 218 CDD cupin_OxOx 23 214 - -
Sto8g0325 218 SMART Cupin_1_3 59 208 IPR006045 -
Sto8g0325 218 Pfam Cupin 62 207 IPR006045 -
Sto8g0325 218 PANTHER GERMIN-LIKE PROTEIN 16 216 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Sto8g0325 Sto-Chr8 2056611 2057570 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Sto8g0325 1 218 Miscellaneous Gene Families AT3G05930 55.708 7.03e-87 254
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Sto8g0325 - - gmx:100302722 362.073