Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Sto8g0306 ATGGAGTACAAGCATTTGTGGGTGGCTTTCTGCTTATGGGCTTTAACATGCtcacttcttccttctttttcttctggGATTATGAGAATTGGTTTGAAGAAGACACGTCTAGATCCTCAAACCATTCGAGCTGCCAGAGCCATAAGAGAAGAGCTGAGACCAGGAAGATGGATGAAGGGCGCAGCATATAAGTATATCAGTAATTCAAACAAAGAAGATATAGTACCCCTGAAGGATTATTTGGATGCACAATATTATGGAGAGATTGAAATTGGGTCACCCCCACAGACCTTCACTGTCATATTTGATACTGGTAGTTCCAATCTGTGGGTTCCATCATCAAAGTGCTATTTTTCTATTGCCTGCTATATCCATAATTGGTACAAGTCAAGCAAATCCAGTACATATGCTGAGAATGGAACGTCGTGTGAAATACAATATGGATCTGGATCGTTATATGGCTTTTTCAGTCAAGATAATGTTAAAGTTGGAGATGTGGTTGTGAAGCATCAAGATTTCATCGAGGCTACTAGTGAAAGAAGTCTTAGCTTTGCATTAGCAAAGTTTGATGGGATACTTGGGCTTGGGTTTGAAGAAATCTCAGTTGGGAAAGCAGTACCAGTATGGTACAATATGGTGGAGCAAGATCTTGTGAATGAGCAGGTTTTCTCTTTTTGGCTCAATGTGGATTCAGAGGCAGAAGAGGGTGGTGAATTAGTATTTGGAGGTGTTGATCCAAATCACTTCAAAGGAGAACATACTTATGTTCCAATTACAAGAAAGGGTTACTGGCAGTTTGAAATGGGAGATTTTCTCATTGGAGGTTTGTCAACAGGTATTTGCGAGGGTGGATGTGCTGCTATTGTGGATTCAGGAACATCTTTGCTTGCTGGTCCTACCTCAGTTGTGGCTGAAATCAACCATGCCATTGGAGCTGAAGGAGTTGTGAGTTCAGAATGTAAGGAAGTTGTTTCTCAATATGGAGACAGGATATGGGATCTCTTAGTAGCAGGGGTGGAGCCTGATAAAGTGTGTTCACAAGTTGGTTTATGTGATTTTTACAGTGATCAATCTAAGAGCACTAATGGGATTGAGATGGTGACTGAGAAGATAGAGATAGAGGAGTTGTCAGCAGTTAGAGATGATACGATGTGCACTTTCTGTGAGATGGCTGTAAATTGGGTGCAGAATCAACTGAAACGGAAGGTGACGAAGGAAAAAGTGATAAACTACATAAATCAGTTGTGTGAGAGAATTCCAAGTCCAGGTGGACAGTCCACAATAAGTTGTGATAGTGTTTCTCAGATGCCAAACATTACGCTAACCATTGGAAATAAAACTTTCATCCTCACTCCACAGCAGTATATTCTGAAAACTGGAGAAGGCTCTTCAGCAACCTGCCTCAGTggatttacagcttttgatgttcCCCCTCCACAGGGCCCTCTCTGGATTCTTGGTGATGTTTTTATGAGGGTATATCATACTGTCTTTGATTACGGCAATCTCCGTCTGGGTTTTGCTCAAGCCGCCTAG 1536 0.4049 MEYKHLWVAFCLWALTCSLLPSFSSGIMRIGLKKTRLDPQTIRAARAIREELRPGRWMKGAAYKYISNSNKEDIVPLKDYLDAQYYGEIEIGSPPQTFTVIFDTGSSNLWVPSSKCYFSIACYIHNWYKSSKSSTYAENGTSCEIQYGSGSLYGFFSQDNVKVGDVVVKHQDFIEATSERSLSFALAKFDGILGLGFEEISVGKAVPVWYNMVEQDLVNEQVFSFWLNVDSEAEEGGELVFGGVDPNHFKGEHTYVPITRKGYWQFEMGDFLIGGLSTGICEGGCAAIVDSGTSLLAGPTSVVAEINHAIGAEGVVSSECKEVVSQYGDRIWDLLVAGVEPDKVCSQVGLCDFYSDQSKSTNGIEMVTEKIEIEELSAVRDDTMCTFCEMAVNWVQNQLKRKVTKEKVINYINQLCERIPSPGGQSTISCDSVSQMPNITLTIGNKTFILTPQQYILKTGEGSSATCLSGFTAFDVPPPQGPLWILGDVFMRVYHTVFDYGNLRLGFAQAA 511
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Sto8g0306 511 Gene3D Acid Proteases 28 243 IPR021109 -
Sto8g0306 511 PANTHER FUNGAL PROTEINASE A, ASPARTIC PROTEINASE SUPERFAMILY PROTEIN 3 511 - -
Sto8g0306 511 Pfam Eukaryotic aspartyl protease 84 510 IPR033121 -
Sto8g0306 511 SMART sapb_4 279 351 IPR008139 -
Sto8g0306 511 ProSiteProfiles Peptidase family A1 domain profile. 85 508 IPR033121 -
Sto8g0306 511 Gene3D Acid Proteases 244 511 IPR021109 -
Sto8g0306 511 ProSiteProfiles Saposin B type domain profile. 381 422 IPR008139 -
Sto8g0306 511 SUPERFAMILY Acid proteases 15 510 IPR021109 -
Sto8g0306 511 Pfam Saposin-like type B, region 1 384 420 IPR007856 GO:0006629
Sto8g0306 511 SUPERFAMILY Saposin 316 420 IPR011001 -
Sto8g0306 511 ProSitePatterns Eukaryotic and viral aspartyl proteases active site. 287 298 IPR001969 GO:0004190|GO:0006508
Sto8g0306 511 Gene3D - 315 420 - -
Sto8g0306 511 PANTHER BETA-SITE APP-CLEAVING ENZYME, ISOFORM A-RELATED 3 511 IPR001461 GO:0004190|GO:0006508
Sto8g0306 511 Pfam Saposin-like type B, region 2 319 351 IPR008138 -
Sto8g0306 511 ProSitePatterns Eukaryotic and viral aspartyl proteases active site. 100 111 IPR001969 GO:0004190|GO:0006508
Sto8g0306 511 PRINTS Pepsin (A1) aspartic protease family signature 91 111 IPR001461 GO:0004190|GO:0006508
Sto8g0306 511 PRINTS Pepsin (A1) aspartic protease family signature 237 250 IPR001461 GO:0004190|GO:0006508
Sto8g0306 511 PRINTS Pepsin (A1) aspartic protease family signature 287 298 IPR001461 GO:0004190|GO:0006508
Sto8g0306 511 PRINTS Pepsin (A1) aspartic protease family signature 484 499 IPR001461 GO:0004190|GO:0006508
Sto8g0306 511 CDD phytepsin 75 509 IPR033869 GO:0004190
Sto8g0306 511 ProSiteProfiles Saposin B type domain profile. 315 355 IPR008139 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Sto8g0306 Sto-Chr8 1974513 1977228 Dispersed/Tandem
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Sto8g0306 K08245 - gmx:547993 774.622
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Sto8g0306 8 1974513 1977228 Sto8g0306 8 1974513 1977228 ECH