Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Sto8g0283 ATGGGGACTGAAAATCCTGGACGTCCAAGTTTCCCTGCTAGACCGGCCACCACACCTTTTGCTGCTCCACCACAGACTATGTCTCCTTTTTCATCAACTGGTCCTGTGGTTGGATCAGAGCCGCCTCCTTTCCGACCTGCTCCTCCTGCTGCTCCCCAGACTTCAACACCATTTTTATCATCTGGTCCTTCAAGTGTACAGGGGGCATCCAGTTTTAGACCTATGCCTCCGGGCAGGTTTAATGATCCATCAGTGCCTCCGCCTCCAACATACAATGTCCCACCTGTTGGTGGCCCTTTCCAGAGTTTTCCAACACCACGGTTTACCTCAACTGTGCAAGCACCTCCACATGTTGCACCAATGGGGCAACCATCGATTCAACCTTCTGCAAATCAAGCACCATCGTTGCCAGCATCCCTTCAACCACAGACACCTTTTGTTCCAATGGGATCTCCCCCACAAAGTGCCACTCCTGCACCTCTGAACTCAAATGTTCCTCCTCTGTCAGACTCATCTTTTCCTGGACCTAGGCCTAATTTTCAGCCATCTTTTCCTGGATATGCCCTTAAGCAGACCGGTGCAGAAATGCAAGGGCCACCTGTGCATTCATCTTTTTCCACAAATCAAGGAAATTATGCATCTGCTCCACCTGTTCTTTCTCATCAAGGAAGTTATGTCCCACCGCCTCCAGTGGCTGCTCCATCAGGCATGCAGCAAATGCAACAGCCTGGATACGGACCTTCTATCGGTGCCATTCAGGGCCTGACGGAGGACTTCAGTTCACTCTCTATTCAAACGCGCCCTGGAACAATGGACCAAATAATTGATGCTAAAGAACTTCCAAGGCCACTGGATGGTGATGTGGAGCCGAGGTCTTTGGCTGAGACTTATCCCATGAACTGCAATCCCAAATATCTACGACTTACGACAAGTGCAATTCCGAGCTCCCAGTCCTTAGCTTCAAGATGGCATCTACCTCTTGGAGCAGTTGTATGTCCACTTGCAGAAGCTCCCGACGAGGAAGAGGTGCCTATAATCAATTTTGCTTCAAGTACTGTTATACGCTGTAGGAGATGTCGCACATATGTGAATCCATATGTGACATTCACGGATGCTGGAAGAAAATTCCGGTGCAATGTTTGTGCTTTGCTTAATGATGTTCCTAGTGAATATTTTGCCCAATTAGATGCCACTGGAAGAAGAGTTGATTTGGATCAGAGACCTGAGCTTACACAGGGTACTGTGGAATTTGTTGCCCCTGCTGAATATATGGTGCGACCACCTATGCCCCCAGTATATTTCTTCCTCATTGACGTCTCCATATCTGCAGTTAGAAGTGGAATGATTGAGGTTGTGGCCCAAACAATCAAGTCAAGTTTAGATGAGTTGCCTGGCTTTCCACGAACACACATAGGTTTTGCAACATTTGACAGCACAAttcatttttataatatgaaGTCGTCCTTAACTCAACCACAGATGTTGGTAGTCTCAGATCTGGATGACATATTTGTTCCACTACCAGATGATCTTCTTGTTAATTTATCCGAATCACGAAGTGTCGTGGAAACCTTCCTAGATAGTTTGCCATCCATGTTCCGGGACAATGTGAATGTGGAATCAGCTTTTGGTCCAGCTCTTAAGGCTGCGTTTATGGTTATGAATCAACTTGGagggaaattattaatttttcaaaatacacTGCCATCTCTTGGTGTTGGATGCTTGAAATTACGAGGAGATGATGTTCGCATTTATGGCACTGATAAAGAACACATGCTAAGGTTGCCAGAAGATCCATTTTACAAGCAAATGGCTGCTGAGTTTTCTAAATACCAGATCAGTGTGAACGTGTATGCATTCAGTGACAAGTACACTGACATAGCTTCCATAGGAACTCTGGCAAAGTACACTGCTGGTCAAGTATATTATTATCCAGCTTTTCAATCAGTTATTCATGGGGAAAAGTTGAGGCATGAGTTAAGGAGAGACCTTACCAGAGAAACCGCCTGGGAAGCTGTGTTGCGTATTAGATGTGGAAAAGGTGTTCGCTTCACAACTTTTCATGGAAACTTTATGCTAAGGTCCACTGATTTGTTAGCACTTCCGGCTGTAGACTGTGATAAAGCATTTGCCATGCAGTTGTCTCTTGAAGAGACATTGCTGACTACTCAGACCATGTATTTCCAAGTCGCATTGTTatacacTGCATCTTGTGGAGAAAGGCGAATCAGAATACACACTGCTGCAGCTCCAGTAGTTACTGACTTGGGGGAGATGTATCGCCTGGCCGATACTGGTGCCATTGTTTCTCTGCTTAGTAGGCTAGCAATTGAAAAAACATTGTCTAATAAACTGGAAGATGCGAGGAATGCTGTACAACTAAGAATTGTCAAAGCCCTCAGAGAATATCGAAATCTCTATGCTGTGCAACATCGCTTGGCCAACAGGATGATATATCCTGAGTCTCTAAAATTCCTACCCTTGTACGGATTAGCACTTAGTAAATCAACCCCTCTACGTGGAGGGTATGCTGATGCTCCATTGGATGAACGGTGTGCAGCAGGATACACAATGATGGCTCTCCCAATAAAAGGGCTGTTGAAACTTCTCTATCCAAGCTTGATTCGAATCGATGAATATCTTTTAAAGGCATCTGGACAGTCTGATGGATTACAAAACATTGAGAAAAGGTTACCTTTGATTGGGGAGAGCTTGGATTCTAGAGGCCTTTATGTATATGATGATGGCTTCCGGTTTGTTATATGGTTTGGTAGAGTGCTTTCACCTGATATAGCTATGAATTTGCTTGGGGCAGATTTGGCTGCGGATTTATCAAAGGTTACTCTTAATGAGTATGATAACGAGATGTCAAGGAAGCTGATTAAGCTACTTGATAAATTGAGAAATAATGATCGTTCATATTATCAGTTGTGCCACCTTGTGAGGCAAGGCGAACAGCCTAGAGAAGGATTCCTTATTCTAGCAAATCTTGTTGAGGACCAGATGGGTGGTAACAATGGTgggaacaaaattgaatatggAGTCAAGGTTGCATCGTTTATGTGTGGATGCTTGGCTTGGCTAATTGGTCGCGAGGATGGTGTTTCATGGATACTTTTGGTTCATCCTGGGATGTATCAATTAGGTGAACTGTATCTTACTggttaa 3171 0.4383 MGTENPGRPSFPARPATTPFAAPPQTMSPFSSTGPVVGSEPPPFRPAPPAAPQTSTPFLSSGPSSVQGASSFRPMPPGRFNDPSVPPPPTYNVPPVGGPFQSFPTPRFTSTVQAPPHVAPMGQPSIQPSANQAPSLPASLQPQTPFVPMGSPPQSATPAPLNSNVPPLSDSSFPGPRPNFQPSFPGYALKQTGAEMQGPPVHSSFSTNQGNYASAPPVLSHQGSYVPPPPVAAPSGMQQMQQPGYGPSIGAIQGLTEDFSSLSIQTRPGTMDQIIDAKELPRPLDGDVEPRSLAETYPMNCNPKYLRLTTSAIPSSQSLASRWHLPLGAVVCPLAEAPDEEEVPIINFASSTVIRCRRCRTYVNPYVTFTDAGRKFRCNVCALLNDVPSEYFAQLDATGRRVDLDQRPELTQGTVEFVAPAEYMVRPPMPPVYFFLIDVSISAVRSGMIEVVAQTIKSSLDELPGFPRTHIGFATFDSTIHFYNMKSSLTQPQMLVVSDLDDIFVPLPDDLLVNLSESRSVVETFLDSLPSMFRDNVNVESAFGPALKAAFMVMNQLGGKLLIFQNTLPSLGVGCLKLRGDDVRIYGTDKEHMLRLPEDPFYKQMAAEFSKYQISVNVYAFSDKYTDIASIGTLAKYTAGQVYYYPAFQSVIHGEKLRHELRRDLTRETAWEAVLRIRCGKGVRFTTFHGNFMLRSTDLLALPAVDCDKAFAMQLSLEETLLTTQTMYFQVALLYTASCGERRIRIHTAAAPVVTDLGEMYRLADTGAIVSLLSRLAIEKTLSNKLEDARNAVQLRIVKALREYRNLYAVQHRLANRMIYPESLKFLPLYGLALSKSTPLRGGYADAPLDERCAAGYTMMALPIKGLLKLLYPSLIRIDEYLLKASGQSDGLQNIEKRLPLIGESLDSRGLYVYDDGFRFVIWFGRVLSPDIAMNLLGADLAADLSKVTLNEYDNEMSRKLIKLLDKLRNNDRSYYQLCHLVRQGEQPREGFLILANLVEDQMGGNNGGNKIEYGVKVASFMCGCLAWLIGREDGVSWILLVHPGMYQLGELYLTG 1056
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Sto8g0283 1056 SUPERFAMILY C-terminal, gelsolin-like domain of Sec23/24 882 1007 IPR036180 -
Sto8g0283 1056 SUPERFAMILY beta-sandwich domain of Sec23/24 197 763 - -
Sto8g0283 1056 MobiDBLite consensus disorder prediction 21 35 - -
Sto8g0283 1056 MobiDBLite consensus disorder prediction 156 177 - -
Sto8g0283 1056 MobiDBLite consensus disorder prediction 54 71 - -
Sto8g0283 1056 Gene3D von Willebrand factor, type A domain 430 667 IPR036465 -
Sto8g0283 1056 MobiDBLite consensus disorder prediction 124 145 - -
Sto8g0283 1056 Pfam Sec23/Sec24 beta-sandwich domain 670 753 IPR012990 -
Sto8g0283 1056 SUPERFAMILY vWA-like 428 667 IPR036465 -
Sto8g0283 1056 Pfam Sec23/Sec24 trunk domain 428 664 IPR006896 GO:0006886|GO:0006888|GO:0030127
Sto8g0283 1056 Gene3D Sec23/Sec24 helical domain 754 1004 - -
Sto8g0283 1056 PANTHER SEC24-RELATED PROTEIN 28 1008 - -
Sto8g0283 1056 MobiDBLite consensus disorder prediction 1 210 - -
Sto8g0283 1056 SUPERFAMILY Zn-finger domain of Sec23/24 341 427 IPR036174 GO:0006886|GO:0006888|GO:0008270|GO:0030127
Sto8g0283 1056 PANTHER OS04G0129500 PROTEIN 28 1008 - -
Sto8g0283 1056 MobiDBLite consensus disorder prediction 39 53 - -
Sto8g0283 1056 Gene3D - 301 753 - -
Sto8g0283 1056 SUPERFAMILY Helical domain of Sec23/24 765 872 IPR036175 GO:0006886|GO:0006888|GO:0030127
Sto8g0283 1056 Pfam Sec23/Sec24 zinc finger 354 391 IPR006895 GO:0006886|GO:0006888|GO:0008270|GO:0030127
Sto8g0283 1056 Gene3D Severin 873 1001 IPR029006 -
Sto8g0283 1056 Pfam Sec23/Sec24 helical domain 765 868 IPR006900 GO:0006886|GO:0006888|GO:0030127
Sto8g0283 1056 MobiDBLite consensus disorder prediction 79 101 - -
Sto8g0283 1056 CDD Sec24-like 428 669 IPR041742 GO:0006886|GO:0006888|GO:0030127
Sto8g0283 1056 Gene3D - 300 412 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Sto8g0283 Sto-Chr8 1851692 1859265 Dispersed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Sto8g0283 K14007 - gmx:100791083 1549.26