Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Sto7g2439 ATGCCAGTGTCGAAGAAGCCCATCGCGAACAGGAAACGAAAGCGCCATATGCTCCCTTCTTGCCGCTCATGCTCTACGCACACACGCTGCTTGCTTCACGAAGCTTCTAAACAGCAGATTTGGAAGATGTTCACTACTGGGATTCCCTTGCAGGAAAAAGATGGTATTTTTCCGAGACACAAGGCTCCATTTATAACTTTTGTTTTAGGGGGCCCTGGTAGTGGGAAAGGAACACAATGTGCAAAAATTGTTGAAACCTTTGGATTTAATCATCTGAGTGCCGGAGATCTTCTGAGAAAAGAGATAGCTTCTAATAGTGAATATGGCTCAATGATTCTGGATACaattaaagaaggaaaaattgttCCCTCAGAGGTGACTGTCAAATTGCTTCGCAGAGAGATGGAACTAAGTGACAATCATAAGTTTCTTATTGATGGTTTCCCAAGAAGTGAGGAGAATCGCAGAGCTTTTGAAGAAATTaTGGAAGCAGAACCAGATGTAGTACTTTTCTTTGATTGCCCTGAAGAAGAGATGGTCAAAAGGGTGCTGAACCGAAATCAGGGTCGAGTTGATGACAACATAGATACTATCAAAAAACGCCTTAAAGTATTTGAGGCATTAAATATTCCAGTCATAGATCACTATGCAAAGAGAGGGAAACTTCACAAGATCAATGCCGTAGGATCGGAGGACGAAATATTTGAACAAGTTCGGCCAATTTTTGCTGCATATCAGCATGAGGCTAAATGA 753 0.4104 MPVSKKPIANRKRKRHMLPSCRSCSTHTRCLLHEASKQQIWKMFTTGIPLQEKDGIFPRHKAPFITFVLGGPGSGKGTQCAKIVETFGFNHLSAGDLLRKEIASNSEYGSMILDTIKEGKIVPSEVTVKLLRREMELSDNHKFLIDGFPRSEENRRAFEEIMEAEPDVVLFFDCPEEEMVKRVLNRNQGRVDDNIDTIKKRLKVFEALNIPVIDHYAKRGKLHKINAVGSEDEIFEQVRPIFAAYQHEAK 250
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Sto7g2439 250 Hamap UMP-CMP kinase [CMPK1]. 63 245 IPR006266 GO:0004127|GO:0006207|GO:0006221|GO:0009041
Sto7g2439 250 TIGRFAM UMP_CMP_kin_fam: UMP-CMP kinase family 65 242 IPR006266 GO:0004127|GO:0006207|GO:0006221|GO:0009041
Sto7g2439 250 Gene3D - 58 243 IPR027417 -
Sto7g2439 250 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 61 242 IPR027417 -
Sto7g2439 250 PANTHER NUCLEOTIDE KINASE 50 246 IPR000850 GO:0005524|GO:0006139|GO:0019205
Sto7g2439 250 PRINTS Adenylate kinase signature 67 80 IPR000850 GO:0005524|GO:0006139|GO:0019205
Sto7g2439 250 PRINTS Adenylate kinase signature 95 109 IPR000850 GO:0005524|GO:0006139|GO:0019205
Sto7g2439 250 PRINTS Adenylate kinase signature 143 159 IPR000850 GO:0005524|GO:0006139|GO:0019205
Sto7g2439 250 PRINTS Adenylate kinase signature 190 205 IPR000850 GO:0005524|GO:0006139|GO:0019205
Sto7g2439 250 PRINTS Adenylate kinase signature 207 221 IPR000850 GO:0005524|GO:0006139|GO:0019205
Sto7g2439 250 Pfam Adenylate kinase 68 220 - -
Sto7g2439 250 CDD ADK 67 234 IPR000850 GO:0005524|GO:0006139|GO:0019205
Sto7g2439 250 ProSitePatterns Adenylate kinase signature. 143 154 IPR033690 -
Sto7g2439 250 PANTHER UMP-CMP KINASE 50 246 - -
Sto7g2439 250 Hamap Adenylate kinase [adk]. 64 243 IPR000850 GO:0005524|GO:0006139|GO:0019205
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Sto7g2439 Sto-Chr7 29903102 29906729 Dispersed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Sto7g2439 K13800 - jre:108987390 343.969
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Sto7g2439 7 29903102 29906729 Sto7g2439 7 29903102 29906729 ECH