LGRPv2

Gene search

Sequence information

Select	Gene	Cds	Cds_length	GC_content	Pep	Pep_length
	Sto7g0765	ATGACCGAGGTTCTCCATTCGCCTTCCCATTTTTCTTCATCCTCAAGGACaacctcttcctcctcttcttccctATCTTCCACTTCCAGGGATGGCATTCTCCTCCAAGAACCTCCGTCGCCGCCGCCGTCGACTTCTGTAGCCCTGGCGGCGACCAACGGTGACGCCGAGGAGGAGCCGGCCGCCGCCGCGGCCAAGCACGGGAGGACAGAACAGCTCTCTGTTCTGGCGCTTCTTGTGACTCTTTTCAGGAAGTCGTTGATTGCTTGTAAGAGTGATAGTAGGAGGGAGCTGTGTGCGATGGAGATAGGATGGCCTTCTAATGTGCGCCATCTTGCACATGTCACCTTTGATAGGTTCAATGGTTTCTTGGGTTTGCCTGTTGAGTTTCAACCTGAAGTTCCCACAAGGCCTCCTAGTGCTAGTACTACTGTTTTCGGGGTTTCAACGGAATCCATGCAATTATCATATGACTCTAGAGGGAACAGTGTGCCAACAATTCTGTTACTAATGCAAAGACGCTTATATTCTCGTGGAGGGTTGCAGACAGAGGGGATTTTCAGAATTAACGCAGAAAATAGTCAAGAAGAATATGTTAGGGACCAATTAAATAGTGGAGTGGTCCCACAAGGCGTTGATGTACATTGTTTGGCAGGACTTATCAAGGCTTGGTTTAGGGAGCTTCCTAGGGGTGTTCTGGATTCTTTATCACCTGAGCAGGTAATGCAATGCCAGACAGAAGAGGAGTGTGCTGAACTAGTGAAGCTTCTACCTTCTACTGAAGCTTCCCTCTTGGACTGGGCCATCAATCTCATGGCTGATGTTGTCCTACAGGAACATCTCAACAAGATGAACGCCCGCAATATTGCCATGATGGCAGACCCTTTGACTGCATTAATGTATGCAGTTCAAGTGATGAACTTCTTGAAGACACTTGTATTAAGGACACTCCGAGAAAGAAAGGATTCATTGGTAGAATCTTCTTCTCAATCTCATTCGGACGAGCCTTCTGACGAGAATGGGCACCATAGCCCTATGCATTCCTGCCAGGAAGATACTACTGctgaagaaaatgaagaagaggcTCAGGAAAACTTAGCTTCTAAGAAAACTGTCATACAATGTTCATCTGAGCAAGCAGTTTGTGATGAGGCTTTATATTGTGAGTTTCCACCCAAAGAAAATTCTGGGAAGAGCAAGTCTGGCCAATCAAGTAATTCAAATATTTTACAGGGCACCAAGAAAACTAGAGTCCATCAACCTGCAATTCACAAAACAGTTCCTGTTGAGAAGAAAGGGATTAGCAATCTGAGTTGTTTAGATTCAAGATTTGAGAGGATAGAAGCTTGGAGGTGA	1356	0.4469	MTEVLHSPSHFSSSSRTTSSSSSSLSSTSRDGILLQEPPSPPPSTSVALAATNGDAEEEPAAAAAKHGRTEQLSVLALLVTLFRKSLIACKSDSRRELCAMEIGWPSNVRHLAHVTFDRFNGFLGLPVEFQPEVPTRPPSASTTVFGVSTESMQLSYDSRGNSVPTILLLMQRRLYSRGGLQTEGIFRINAENSQEEYVRDQLNSGVVPQGVDVHCLAGLIKAWFRELPRGVLDSLSPEQVMQCQTEEECAELVKLLPSTEASLLDWAINLMADVVLQEHLNKMNARNIAMMADPLTALMYAVQVMNFLKTLVLRTLRERKDSLVESSSQSHSDEPSDENGHHSPMHSCQEDTTAEENEEEAQENLASKKTVIQCSSEQAVCDEALYCEFPPKENSGKSKSGQSSNSNILQGTKKTRVHQPAIHKTVPVEKKGISNLSCLDSRFERIEAWR	451

Annotation information

Select	Seq ID	Length	Analysis	Description	Start	End	IPR	GO
	Sto7g0765	451	MobiDBLite	consensus disorder prediction	394	420	-	-
	Sto7g0765	451	MobiDBLite	consensus disorder prediction	1	67	-	-
	Sto7g0765	451	Pfam	RhoGAP domain	165	295	IPR000198	GO:0007165
	Sto7g0765	451	SUPERFAMILY	GTPase activation domain, GAP	142	312	IPR008936	GO:0007165
	Sto7g0765	451	Gene3D	CRIB domain	99	132	IPR036936	-
	Sto7g0765	451	ProSiteProfiles	Rho GTPase-activating proteins domain profile.	148	325	IPR000198	GO:0007165
	Sto7g0765	451	PANTHER	MKIAA1688 PROTEIN	1	371	IPR044785	GO:0005096
	Sto7g0765	451	MobiDBLite	consensus disorder prediction	324	366	-	-
	Sto7g0765	451	CDD	RhoGAP	165	312	-	-
	Sto7g0765	451	Gene3D	Rho GTPase activation protein	133	326	IPR008936	GO:0007165
	Sto7g0765	451	SMART	PBD_5	103	137	IPR000095	-
	Sto7g0765	451	MobiDBLite	consensus disorder prediction	324	353	-	-
	Sto7g0765	451	SMART	RhoGAP_3	162	317	IPR000198	GO:0007165
	Sto7g0765	451	ProSiteProfiles	CRIB domain profile.	103	116	IPR000095	-
	Sto7g0765	451	CDD	CRIB	101	141	-	-
	Sto7g0765	451	PANTHER	PAK-BOX/P21-RHO-BINDING DOMAIN RHO GTPASE ACTIVATING PROTEIN	1	371	-	-
	Sto7g0765	451	MobiDBLite	consensus disorder prediction	396	415	-	-
	Sto7g0765	451	MobiDBLite	consensus disorder prediction	1	34	-	-

Duplication type information

Select	Gene	Chromosome	Start	End	Duplicated_type
	Sto7g0765	Sto-Chr7	5659504	5664127	Wgd

Pathway information

Select	Query	KO	Definition	Second KO	KEGG Genes ID	GHOSTX Score
	Sto7g0765	-		K20642	ccaj:109798318	553.132

Event-related genes

Select	Gene_1	Chr_1	Start_1	End_1	Gene_2	Chr_2	Start_2	End_2	Event_name
	Sto7g0765	7	5659504	5664127	Sto12g0423	12	2715782	2717196	CCT
	Sto7g0765	7	5659504	5664127	Sto7g0765	7	5659504	5664127	ECH