Gene search
Sequence information
| Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
|---|---|---|---|---|---|---|
| Sto7g0686 | ATGGCTAAGAGTTCATTCAAGATGGAGCATCCCCTTGAAAGGAGACAGGCTGAAGCAGCTCGCATAAGAGAAAAATATCCGGATAGAATACCAGTGATTGTTGAAAGGGCTGAAAAGAGTGATGTTCCTGAAATTGATAAGAAAAAGTATCTGGTTCCCGCTGACTTGACTGTTGGCCAGTTTGTCTATGTGGTGAGAAAGAGAATCAAGTTAAGCCCTGAGAAGgccattttcatttttgtcaagAACATGTTACCGCCAACCGCTGCTATCATGTCTGGGGTTTATGAAGAATACAAGGATGAAGACGGATTCCTGTATATGAGTTACAGCGGAGAGAACACATTTGGGATGATGATCTGA | 363 | 0.405 | MAKSSFKMEHPLERRQAEAARIREKYPDRIPVIVERAEKSDVPEIDKKKYLVPADLTVGQFVYVVRKRIKLSPEKAIFIFVKNMLPPTAAIMSGVYEEYKDEDGFLYMSYSGENTFGMMI | 120 |
Annotation information
| Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
|---|---|---|---|---|---|---|---|---|
| Sto7g0686 | 120 | SUPERFAMILY | Ubiquitin-like | 3 | 117 | IPR029071 | - | |
| Sto7g0686 | 120 | Gene3D | - | 1 | 118 | - | - | |
| Sto7g0686 | 120 | Pfam | Autophagy protein Atg8 ubiquitin like | 14 | 117 | IPR004241 | - | |
| Sto7g0686 | 120 | PANTHER | AUTOPHAGY-RELATED PROTEIN | 1 | 117 | - | - | |
| Sto7g0686 | 120 | CDD | Ubl_ATG8 | 12 | 114 | - | - | |
| Sto7g0686 | 120 | PANTHER | MICROTUBULE-ASSOCIATED PROTEINS 1A/1B LIGHT CHAIN 3-RELATED | 1 | 117 | IPR004241 | - |
Duplication type information
| Select | Gene | Chromosome | Start | End | Duplicated_type |
|---|---|---|---|---|---|
| Sto7g0686 | Sto-Chr7 | 5029114 | 5031330 | Dispersed/Wgd |
Pathway information
| Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
|---|---|---|---|---|---|---|
| Sto7g0686 | K08341 | - | pop:7468504 | 218.394 |
Event-related genes
| Select | Gene_1 | Chr_1 | Start_1 | End_1 | Gene_2 | Chr_2 | Start_2 | End_2 | Event_name |
|---|---|---|---|---|---|---|---|---|---|
| Sto7g0686 | 7 | 5029114 | 5031330 | Sto10g0460 | 10 | 3750692 | 3752508 | ECH | |
| Sto7g0686 | 7 | 5029114 | 5031330 | Sto7g0686 | 7 | 5029114 | 5031330 | ECH |