Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Sto7g0349 ATGGCCATACTTCCTTTTCTGCTCTTTATTATCATCAAACACCTTACCATTTTCTCCCATCAATTTGCTTCTGCACCTACTGATATAATTACTCCCTCTCAACCTCTAGCAGATGGCAGCACTTTGGTTTCCAAAGATGGAAGCTTTGAATTGGGTTTCTTCAATCCTCCCACTTCCACGAAGCGCTACGTCGGAATCTGGTTCCGCAACATCCCACATCAAACTGTCGTTTGGGTTGCAAATCGTGACAACCCAATCACAGTCACAGACAACTCAAGTATGATCACCATTAACACACATGGAAACCTCGTACTTGTCACTCACAATAACACAATTCTTTGGTCCGCAAACTCAACGACAACAAGCACGGCCTCGAGTCCAAACCCCATAGTGCAGCTCCTAGATTCTGGGAACTTAGTGGTAAGAGATGAGAAACAGAGTGATCCTGAAAGTTTCCTATGGCAGAGCTTTGACTATCCTTCGGATACATTCATATCAGGAATGAAGTTGGGATGGGACCTAAAGAAAGGCATTAACCGACGCCTAACTGCTTGGAGGAATTGGGACGACCCATCTCAAGGAAACTTCACTTGCGGTCTTTCACTTGGGAGTATTCCTGAACTATACATGTGGAAGGGGTCCTCAGTGTACCATCGGAGTGGGCCCTGGAACGGCCTTCGATTTAGCAGTGCACCTATACTGAAGCAGAATCCAATTGTGGATACCCAATTTGTCAACAATCAAGATGAGGTGTATTATGCATTCATCTTCAAAAATAAGTCTTTGATTTCCACAGTCGTCATGAACCAAACCACTCTTCTACGTCAATTCTTCGTCTGGTTTCCAGAAAATCAAGCATGGAGTCTTTTCGTGTCTGTACCCGGAGACGACTGTGATGTTTATAACCGGTGCGGTCCATATGGAAACTGTGTGGTGGGTGAGTTTCCAATTTGTCAATGTTTGAATGGGTTCGAGCCCAAATCACCCCAAAACTGGGACGCAACGAACTGGGCCCAGGGATGTGTGCGCAGTCAACCCTGGCAGTGTGGGGTCAAAGGCAGAGATGGGTTTAAGAGATTTAGTGGGTTGAAATTGCCAGATGTCACAAACACATGGGCTAATGGAAGCATGACACTGGAGGAATGCAAAGCCAAATGCTTGAATAACTGTTCTTGTATGGCTTATGCAAACATGGACATTAGAGGAGAGGGTAGTGGGTGTATAATTTGGTTTGGTGATCTAATTGATATCAGAGTGGTTCCAAATGCTGGGCAAGATCTGTATATTCGAATGGTTGATTCAGATAAAGGTGCCGTAGGAAGCAAGAAAAAGGTGGCCCTCATAATCTCGTTTACTATCTTGGTGCTTCTTGTGTTGCTTTTCACTTTCTCTTACTTTCACCGGAGAAAAAGAATGTCAAGAGAGAAAACCATGTCAACTAAAACGAAAGATGAATGCGAGGAAGAAGATATGGAGCTTCCCTTCTTTGATCTTGCTAAAATAGTTGATGCTACCAACGCCTTCTCAGCTCACAACAAGCTTGGGGAAGGAGGTTTTGGACCTGTATACAGGCGAAGAGTCATCTTGGATGGTTTGGAGTTGCTTTGGAATAAAGACTTTCGTAAGGTGGCTATTGAATGTGACTCTAAGGTACCGTTGGAGCTGGTGGTAAATGGCATTGCAGATTACCATCCCTGTTCTAGTCTTGTTCATCAGATTAGGAGTTTGTTGGATCGCAACTGGAACGTCGACTTGGCAGGGAAGCCAACCAAGTTGCGGACTACATGGGAAAGCTGA 1797 0.4463 MAILPFLLFIIIKHLTIFSHQFASAPTDIITPSQPLADGSTLVSKDGSFELGFFNPPTSTKRYVGIWFRNIPHQTVVWVANRDNPITVTDNSSMITINTHGNLVLVTHNNTILWSANSTTTSTASSPNPIVQLLDSGNLVVRDEKQSDPESFLWQSFDYPSDTFISGMKLGWDLKKGINRRLTAWRNWDDPSQGNFTCGLSLGSIPELYMWKGSSVYHRSGPWNGLRFSSAPILKQNPIVDTQFVNNQDEVYYAFIFKNKSLISTVVMNQTTLLRQFFVWFPENQAWSLFVSVPGDDCDVYNRCGPYGNCVVGEFPICQCLNGFEPKSPQNWDATNWAQGCVRSQPWQCGVKGRDGFKRFSGLKLPDVTNTWANGSMTLEECKAKCLNNCSCMAYANMDIRGEGSGCIIWFGDLIDIRVVPNAGQDLYIRMVDSDKGAVGSKKKVALIISFTILVLLVLLFTFSYFHRRKRMSREKTMSTKTKDECEEEDMELPFFDLAKIVDATNAFSAHNKLGEGGFGPVYRRRVILDGLELLWNKDFRKVAIECDSKVPLELVVNGIADYHPCSSLVHQIRSLLDRNWNVDLAGKPTKLRTTWES 598
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Sto7g0349 598 CDD B_lectin 33 160 IPR001480 -
Sto7g0349 598 ProSiteProfiles EGF-like domain profile. 294 330 IPR000742 -
Sto7g0349 598 PANTHER RECEPTOR-LIKE SERINE/THREONINE-PROTEIN KINASE SD1-8 26 535 - -
Sto7g0349 598 Gene3D Phosphorylase Kinase; domain 1 467 547 - -
Sto7g0349 598 SUPERFAMILY alpha-D-mannose-specific plant lectins 76 191 IPR036426 -
Sto7g0349 598 SMART ntp_6 352 431 IPR003609 -
Sto7g0349 598 CDD EGF_CA 296 328 - -
Sto7g0349 598 Gene3D Hepatocyte Growth Factor 348 427 - -
Sto7g0349 598 CDD PAN_AP_plant 348 430 - -
Sto7g0349 598 ProSiteProfiles Bulb-type lectin domain profile. 27 154 IPR001480 -
Sto7g0349 598 Pfam S-locus glycoprotein domain 219 328 IPR000858 GO:0048544
Sto7g0349 598 PANTHER - 26 535 - -
Sto7g0349 598 SMART blect_4 33 160 IPR001480 -
Sto7g0349 598 Gene3D - 21 157 IPR036426 -
Sto7g0349 598 Pfam PAN-like domain 349 417 IPR003609 -
Sto7g0349 598 Pfam D-mannose binding lectin 75 186 IPR001480 -
Sto7g0349 598 ProSiteProfiles PAN/Apple domain profile. 349 432 IPR003609 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Sto7g0349 Sto-Chr7 2509159 2514643 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Sto7g0349 432 527 Receptor kinase-like Gene Family AT4G23190 35.417 7.60e-11 63.2
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Sto7g0349 - - gmx:100776310 610.527
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Sto7g0349 7 2509159 2514643 Sto7g0349 7 2509159 2514643 ECH