Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Sto7g0333 ATGCACTGCTGTGGAAATGCTAGGCGCACAACAAAAACCAGAAGACAGGTCAGCTGTGGTTCTTATGCTGAATGTACCTCTACTTCATTGGACAACATTTCTCCGAGTCAATCCATCCAAGATGGCGAGACTTTAGTTTCAGCAGCTGGAATTTTTGAACTGGGATTCTTCAGTCCTGGATCTTCAAAAGGTCGATACGTGGGAATATGGTACAAGGAATCTCCTTCAGCAGTTATATGGGTGGCCAACCGAGAAACACAGCTCAAAGAAACCTCTGGAGTTTTACACGTCAACAATCAAGGTGTTCTTGTGCTTGTAAATGCTACAAATAACACTCTGTGGTCATCCAATACATCAAGCAAAGCTAGCAATCCAATTGCACAGCTCTTGGACTCAGGGAATCTTATAGTGAGAAATGGAAATGATAGTAATCTGGACAACTTTTTATGGCAGAGTTTTGATTACCCTGGCGATACATTTATGCCAGGAATGAAGCTTGGATGGAATCTAGAGACAGGTCTTGATAGATTCTTATCATCTTGGAAAAGCAAAGATGATCCTAGTATAGGAGATTATTCAGTTAAAATAGACCTTCGAGGCTATCCACAGGCAGTTCAGTTGAAGGgaactaatatatatactagagcagGTTCATGGAATGGCCTTACTTTTACAGGCTACCCAACTCAAAAGTCGAATCCAGTGTATAAATTTGAATTTGTGTTCAATGAGAAAGAGGTGTATTATGAGTTCCAACTTCAAAATAGATCAGTTTTTACTAGATATGTCACGTCTCCTTCTGGCATTGCGCAGCGCTTAGTTTGGCGAAGTCAAACAATTGGCTGGGAGGTTATTTCAACTGCACCCGCAGATCAATGTGAAAATTATGCCTTGTGTGGTATAAATTCAATATGCAATATAAGTAACACTCCAATCTGTGTTTGCCCCAAAGGATTTGTACCCAAATATCCAGAAGAATGGAACATGTCACGTTGGTCTAATGGCTGTATTCGCAGCATTCCGCTGAAATGTGATAACAGTGATGGCTTCCAGAAGTACATGGGAATGAAGTTGCCAGACACATCTTCTTCATGGCATAGTAAGACCATGGACCTTGAGGAATGCCAGGAATCTTGTCTGAAGAACTGTTCTTGTACAGCATGTGCAAATTTGGATGTTCGAAATGGAGGAAGTGGCTGCCTACTTTGGTTTGATAGAGTCATAGACATGAGGCAACTCCTTCAAGGTGGACAAGACCTTTATATTCGAGTCCCTGCTTCAGAACTAGAACATGATGTAGACCATGGGCGCCATAACATTATCAAGAAGAAGTTACTTATAGGAATAGGAGTTGGCTCCTCCATATTAGTCACGGGCTTGATAATTCTTGGATTTGCAACGGATATATGGAAAAAGAAAGTTCAAAACCTAGGGATCGCAAGAATATTTTACTTGAAGCATCGCCCAAGTAAAATGGGGAAGGAAGACATGGGTCTGCCAACATTTGATTTCTCAATCATAGCTGAAGCCACTAATAATTTTTCCAGCAGCCTTAAGCTAGGAGAAGGGGGATTTGGATCAGTGTACAAGGCATGGAGACTCTGGACTGAAGACAAGTCATTGGAAATTATAGACGAATCCTCAGGTTACAAATGCATTGCTTCTGAGATGATCATACGATGCATACATGTGGGACTGTTATGTGTACAACAAAAACTAGAAGACAGGCCAGACATGTCATCTGTGGTTCTTATGTTGAATGGTGAGAAATTATTGCCAAAGCCAAAGGCTCCTGGATTTTATACTGGAATGGATTTACCTGAAGCAGGCTCATCATCTGGAAATGGCAATCAATTTTCCAGAAATGAGATATCTCTTAGTATTTTAGAGGCTAGATAG 1899 0.4055 MHCCGNARRTTKTRRQVSCGSYAECTSTSLDNISPSQSIQDGETLVSAAGIFELGFFSPGSSKGRYVGIWYKESPSAVIWVANRETQLKETSGVLHVNNQGVLVLVNATNNTLWSSNTSSKASNPIAQLLDSGNLIVRNGNDSNLDNFLWQSFDYPGDTFMPGMKLGWNLETGLDRFLSSWKSKDDPSIGDYSVKIDLRGYPQAVQLKGTNIYTRAGSWNGLTFTGYPTQKSNPVYKFEFVFNEKEVYYEFQLQNRSVFTRYVTSPSGIAQRLVWRSQTIGWEVISTAPADQCENYALCGINSICNISNTPICVCPKGFVPKYPEEWNMSRWSNGCIRSIPLKCDNSDGFQKYMGMKLPDTSSSWHSKTMDLEECQESCLKNCSCTACANLDVRNGGSGCLLWFDRVIDMRQLLQGGQDLYIRVPASELEHDVDHGRHNIIKKKLLIGIGVGSSILVTGLIILGFATDIWKKKVQNLGIARIFYLKHRPSKMGKEDMGLPTFDFSIIAEATNNFSSSLKLGEGGFGSVYKAWRLWTEDKSLEIIDESSGYKCIASEMIIRCIHVGLLCVQQKLEDRPDMSSVVLMLNGEKLLPKPKAPGFYTGMDLPEAGSSSGNGNQFSRNEISLSILEAR 632
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Sto7g0333 632 Gene3D Hepatocyte Growth Factor 341 422 - -
Sto7g0333 632 Pfam D-mannose binding lectin 78 182 IPR001480 -
Sto7g0333 632 SMART ntp_6 345 424 IPR003609 -
Sto7g0333 632 CDD PAN_AP_plant 341 425 - -
Sto7g0333 632 SMART blect_4 36 156 IPR001480 -
Sto7g0333 632 Pfam S-locus glycoprotein domain 215 322 IPR000858 GO:0048544
Sto7g0333 632 ProSiteProfiles PAN/Apple domain profile. 344 425 IPR003609 -
Sto7g0333 632 SUPERFAMILY alpha-D-mannose-specific plant lectins 78 187 IPR036426 -
Sto7g0333 632 PANTHER - 531 630 - -
Sto7g0333 632 PANTHER - 27 530 - -
Sto7g0333 632 Pfam PAN-like domain 344 410 IPR003609 -
Sto7g0333 632 Gene3D Phosphorylase Kinase; domain 1 493 554 - -
Sto7g0333 632 Gene3D - 25 153 IPR036426 -
Sto7g0333 632 ProSiteProfiles Bulb-type lectin domain profile. 30 150 IPR001480 -
Sto7g0333 632 PANTHER - 27 530 - -
Sto7g0333 632 PANTHER - 531 630 - -
Sto7g0333 632 CDD B_lectin 36 156 IPR001480 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Sto7g0333 Sto-Chr7 2399776 2403805 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Sto7g0333 515 601 Receptor kinase-like Gene Family AT4G11480 44.318 4.19e-16 80.1
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Sto7g0333 - - ahf:112769728 616.305
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Sto7g0333 7 2399776 2403805 Sto7g0333 7 2399776 2403805 ECH