Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Sto7g0331 TTGGAGTTGGAGTTCGAGGACCACTTCCCGTCCATGATGGCTCAGTTGGGTGCAGATGGGTTCATAGGTGAGCTCCAGAACGGGTTCCTCTTGTTAATGGACGTCAACAAAGGGTTAATCACCTTTGAGAGCTTGAAGATGAACAGTTTGCTCTTAGGGTTGGAGGTTAGGGACGAAGAGCTTCTGTGCATGTTAATGGAAGGTGATTTGGATGGAGATGGAGCTCTTAGCCAGATGGAGTTTTGCATTCTCATGTTCAGGTTGAGCCCAGCTTTGATGAATGCAGGATatgtttgttaa 300 0.46 LELEFEDHFPSMMAQLGADGFIGELQNGFLLLMDVNKGLITFESLKMNSLLLGLEVRDEELLCMLMEGDLDGDGALSQMEFCILMFRLSPALMNAGYVC 99
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Sto7g0331 99 Gene3D - 2 97 - -
Sto7g0331 99 PANTHER CALCIUM-BINDING PROTEIN KIC 2 95 IPR044205 GO:0005509
Sto7g0331 99 Pfam EF-hand domain pair 37 87 IPR002048 GO:0005509
Sto7g0331 99 PANTHER CALCIUM-BINDING PROTEIN PBP1-LIKE 2 95 - -
Sto7g0331 99 ProSiteProfiles EF-hand calcium-binding domain profile. 56 91 IPR002048 GO:0005509
Sto7g0331 99 ProSitePatterns EF-hand calcium-binding domain. 69 81 IPR018247 -
Sto7g0331 99 SUPERFAMILY EF-hand 22 93 IPR011992 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Sto7g0331 Sto-Chr7 2365651 2365950 Dispersed/Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Sto7g0331 5 95 EF-hand Containing Proteins AT4G27280 61.290 3.66e-32 107
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Sto7g0331 K24345 - aprc:113865090 157.532
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Sto7g0331 7 2365651 2365950 Sto7g0331 7 2365651 2365950 ECH