Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Sto7g0289 ATGGCGAAAAGAGTGATGAAGCCATGTGATGTGTTCCTGAATCACAGAAGCATGGACACAAAGAAAACGGTGTCGTCTCTGCTTTACGACCACCTCACAAGGTTTGGCTTCAATCCCTTCTTGGACAACAAAACCATGAAGCCAGGAGACAAACTGTTCGACAAAATTAATGGTGCCATCTTGGAGTGTAAGGTTGGAGTGGCTATATTCTCCCCTCGCTATTGTGAGTCCAAGTTTTGCCTCCATGAATTGGCACTTCTCATGGAGTGCCGCAAGAAGGTCATACCTATCTTCTGCGACGTCAAGCCCTCTCAGCTTCGTGTCGTCGATGCCGGCAAACTCTCCGGCCACGAGCTCCGGCGATTCAGGTGGGCCCTTGAGGAGGCCAAGTACACCGTCGGACTCACCTTCGACTCTTCTAAaggGAATTTGTCAGATATTGTGACTAATGCTTCTGATATCATCATCAGCAGCATGATAGAGATTGAGAATGAAGAGCAGATGATGATGCACCCTCAAAACTTGCCTATTGCTCTTTAA 540 0.4741 MAKRVMKPCDVFLNHRSMDTKKTVSSLLYDHLTRFGFNPFLDNKTMKPGDKLFDKINGAILECKVGVAIFSPRYCESKFCLHELALLMECRKKVIPIFCDVKPSQLRVVDAGKLSGHELRRFRWALEEAKYTVGLTFDSSKGNLSDIVTNASDIIISSMIEIENEEQMMMHPQNLPIAL 179
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Sto7g0289 179 PANTHER TOLL-INTERLEUKIN-RESISTANCE (TIR) DOMAIN FAMILY PROTEIN 7 170 - -
Sto7g0289 179 Pfam TIR domain 10 107 IPR000157 GO:0007165
Sto7g0289 179 SMART till_3 8 141 IPR000157 GO:0007165
Sto7g0289 179 Gene3D - 4 162 IPR035897 -
Sto7g0289 179 PANTHER COP1-INTERACTING PROTEIN-RELATED 7 170 - -
Sto7g0289 179 ProSiteProfiles TIR domain profile. 7 155 IPR000157 GO:0007165
Sto7g0289 179 SUPERFAMILY Toll/Interleukin receptor TIR domain 8 108 IPR035897 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Sto7g0289 Sto-Chr7 2018875 2019907 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Sto7g0289 10 138 Miscellaneous Gene Families AT1G57670 33.333 1.53e-12 62.8
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Sto7g0289 - - adu:107462512 262.692
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Sto7g0289 7 2018875 2019907 Sto7g0289 7 2018875 2019907 ECH