Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Sto7g0266 ATGGAGGATGAACATTTGGACAACCCCAAAACCATCGTTTACGAAACCCTCAGTCCCCTTTATCTTTCAACTGCCAATCAATCGCCGGTTTCAGATGAACTCGAGCCCTATACTGTTTTCCGCAACGAAATTTCTCTATCCACCCTCCAATGCGCTTCGCCTGAGACCGCTGCTCCCGATTTCTTCTCTCTCCATGTTGGCACTGGTGATGTTACTGAGAGAGATTCCGTCTCTCAAGGATTGACCGAACCTGTTGCAGCAACTGAGCCGAAGACGCCGGTTCTTGTGTCTGAGCCAAAGCTTGAGGGCAGTTGGTTTCGTGGAAACTGCAAATTCAGGAGTCCCATGCTTCAGCTACATAAAGAGATAGTagatttttgtgaatttttgtCGCCTACACCAGAAGAAAAAGCTGCACGTGACACGGCAATAGAATCTGTCTTTGGCGTTATAAAACATATCTGGCCTCACTGCCAGGTTGAAGTTTTTGGGTCTTTCAGGACTGGACTATATCTTCCAACTAGTGATATAGATGTTGTGATTCTGAAGGCTGGTTTACCGAATCCTCAGCTTGGGTTAAATGCACTTTCCCGGGCATTATCACAAAGGAGCATGGCAAAAAATATCATTGTCATTGGAAAGGCTCGTGTGccaattattaaatttgttgAAAAGAGAAGTGGTGTTTCATTTGATATAAGTTTTGATGTGGATAATGGACCCAAAGCTGCTGATTATATTCAGGAAGCAGTGACTAAATGGCCACAACTACGGCCACTTTGTTTGATTTTAAAGGTCTTTTTGCAACAAAGAGAATTAAATGAGGTATATTCTGGTGGGATTGGTTCTTATGCTCTCCTTACCATGCTCATGGCAATGCTACGGAATCTCCGTGAGAGCCAAGCTTCTGCTGAACACAACTTGGGAGTCCTTTTGGTGCAATTTTTTGATTTCTATGGGCGCAAATTGAACACTGCAGATGTTGGTGTGTCTTGCAGTGGGATGGGAACCTTTTTCTTGAAGAGTAAGAAAGGGTTTTTAAACAAAGGGCGGCCAAATCTTTTAGCGATTGAGGATCCCCAGGCACCAGAGAACGACATTGGAAAGAActcttttaattatttccagATTAGGTCAGCCTTTTCTATGGCTTTCACTACATTGACAAATCCCAAGATCATCCTCAGCTTAGGCCCCAACAAAAGTATTCTTGGAACTATAATTAGGCCAGATCCTATCTTGCTGGAGCGTAAAGGGGGGTCAAATGGGGAGGTAACTTTCAATAGCTTGCTTCCTGGAGCAGGAGAGCCATTACAAGTACAGTATGGAGATCAGGATATGTTATGCAATTGGCGGTTCGATGATGAAGAAGAACCTCTGCCACGTGGAATAGATGGGATTGGGGACGAAAGTTCTtcaagaaagaagagaagatcTCCATTTAGGGAAAATCCCAGAAAGAAGCCAAAGGAAAATGGGGATTTGGGAATGGTGAGGAATGAAGAGAATGTCTCTGGGAAAGAGAAcggtttaaaaaagaaaaataggagaAAACCAGAGTGA 1563 0.4159 MEDEHLDNPKTIVYETLSPLYLSTANQSPVSDELEPYTVFRNEISLSTLQCASPETAAPDFFSLHVGTGDVTERDSVSQGLTEPVAATEPKTPVLVSEPKLEGSWFRGNCKFRSPMLQLHKEIVDFCEFLSPTPEEKAARDTAIESVFGVIKHIWPHCQVEVFGSFRTGLYLPTSDIDVVILKAGLPNPQLGLNALSRALSQRSMAKNIIVIGKARVPIIKFVEKRSGVSFDISFDVDNGPKAADYIQEAVTKWPQLRPLCLILKVFLQQRELNEVYSGGIGSYALLTMLMAMLRNLRESQASAEHNLGVLLVQFFDFYGRKLNTADVGVSCSGMGTFFLKSKKGFLNKGRPNLLAIEDPQAPENDIGKNSFNYFQIRSAFSMAFTTLTNPKIILSLGPNKSILGTIIRPDPILLERKGGSNGEVTFNSLLPGAGEPLQVQYGDQDMLCNWRFDDEEEPLPRGIDGIGDESSSRKKRRSPFRENPRKKPKENGDLGMVRNEENVSGKENGLKKKNRRKPE 520
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Sto7g0266 520 Pfam Cid1 family poly A polymerase 307 365 IPR002058 -
Sto7g0266 520 MobiDBLite consensus disorder prediction 459 520 - -
Sto7g0266 520 Gene3D Beta Polymerase, domain 2 132 240 IPR043519 -
Sto7g0266 520 SUPERFAMILY Nucleotidyltransferase 113 267 IPR043519 -
Sto7g0266 520 SUPERFAMILY PAP/OAS1 substrate-binding domain 255 394 - -
Sto7g0266 520 Pfam Nucleotidyltransferase domain 151 235 IPR002934 GO:0016779
Sto7g0266 520 PANTHER POLY(A) RNA POLYMERASE 101 479 IPR045862 GO:0004652|GO:0031499|GO:0043631
Sto7g0266 520 PANTHER INACTIVE NON-CANONICAL POLY(A) RNA POLYMERASE PROTEIN TRF4-2-RELATED 101 479 - -
Sto7g0266 520 Gene3D - 116 390 - -
Sto7g0266 520 MobiDBLite consensus disorder prediction 459 497 - -
Sto7g0266 520 MobiDBLite consensus disorder prediction 505 520 - -
Sto7g0266 520 CDD NT_PAP_TUTase 139 249 - -
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Sto7g0266 K03514 - gmx:100811320 773.467
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Sto7g0266 7 1871011 1876386 Sto7g0266 7 1871011 1876386 ECH