Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Sto7g0251 atgGAGGGTTCTTCTGGTTCGGGTTGGCAGAAGTCTGACAGTTCTAGGGCATTAAATACTTCTGGTGTCTCTGACAGGAACCCAAGGCTTCTTTGTCCTGAGAGGAACACCATTTCTGGTGAGGCATCACATGATTCTGGGTTTAGAAAGGAAAGAGATAGGAGTTTGTTGGCTCAAGAGGTCTGCAAAGATGTAGCAGTTGACCCTTTTGTTCATTCTTTAGAATGGGGTGATATCAGCTTGAGGCAGTGGTTAGATAGACCTGAACGATCTGTAGATGTCTTTGAATGTTTGCACATATTTAGGCAAATAGTAGAAATTGTTAATATAGCTCATTCTCAAGGAATTGTTGTTCATAACGTCAGACCCTCCTGCTTTGTCATGTCATCTTTCAACCATGTCTCCTTCATTGAGTCAGCATCTTGTTCTGATTCTGGCTCAGATTCTGTAGAAGATGGATTGAACAGCCAAGCTGCCGTGATTAAAACTCAACCATCTCCTGGTCCCCGTGGTATACTTCAGAATAGAAGTTTAGCAAGTGAAGATATTGTGCCTGTCAGGACTTCAACAACTGCTTTGTCAGAATCTAGTTGCATGCTGTCAAGTGCAGTGTATGCAGCACGTGCTTCATTAATAGAAGAGACTGAAGAAAATAAAGCCAAAGACAGGAGAAAGGgtgaagaagttgaaggaaagaatcaatCTTTTCCCATGAAACAGATACTGCTGATGGAGACGAGTTGGTACACAAGTCCTGAAGAGGTAGCTGATGCTTCAAGTTTGTGTGCTTCAGACATTTATCGATTGGGGGTTCTCCTATTTGAGCTATTCTGCCCGCTTAGCTCAAGAGAAGAAAAGAGCAGAACCATGTCTAGCCTTAGACATAGAGTTCTTCCTCCACAATTACTTCGGAAATGGCCTAAAGAAGCTTCATTTTGCTTGTGGTTACTGCATCCAGAGCCTAGTAGTCGTCCAACACTGGGGGAGTTGTTGCAAAGTGAGTTCCTTAATCAACAGAGAGATGATATGGAAGAGCGTGAAGCAGCACTAGAGCTTAGAGAAAGGATAGAGGAACAAGAGTTGTTACTAGAGTTTCTTTTGTTAGTTCAGCAGAGGAAACAAGAACTTTCTGAAAAGTTGCAGCATACTGTTTCTTTTCTGTGTTCAGATATTGAAGAAGTGACCAAGAAGCAGGAAAGATTTAAAGAAGTTGCTGGCTCTGAACTAGGGAGCAATAACCGTTTAACACCGAGTTTCCCATCCATGACAGTTGTTGACAGTGAGGATTCTGCTTGCCTAGGGACCAGAAAACGAGTCAGGCCAAGGCTGCATGCTGACAACATTGAGGAATGTGATGATAACATTGGTGATGATCAGAAAAATTATGGAAGTATTCTTTCAAAAAGTTCTCGACTAACCAAGAACTTTAAGAAATTGGAGTCAGCATATTTTCTAACACGTTGCAGACAAGCCTATCCATCTGGGAAACCGGCAGTTAGACATTCACCTTTAGCTACTGATGGGAGAGGGTCTGTTGCAGTGACTGAAAGAAGTTGCATCAATAACTTGACATCAAAAGAGCAGTGCAGGGACAGTAGAAGTGCTTGGATAAATCCTTTCCTAGAGGGTCTGTGCAAGTACCTATCATTCAGTAAGCTAAAGGTTAAGGCTGACCTGAAGCAAGGAGATCTTTTGCATTCTTCCAACCTAGTATGCTCACTCAGTTTCGATCGTGATGGAGAATTTTTTGCTACAGCTGGtgtaaacaagaaaattaaagttTTTGAATGTGACACAATCATAAATGAGGATCGTGATATCCACTATCCAGTTGTGGAGATGGCTAGCAGGTCAAAGTTGAGCAGTATATGTTGGAATACCTACATCAAAAGTCAAATTGCTTCTAGTAACTTTGAAGGTGTTGTCCAGTTATGGGATGTGACAAGAAGTCAAGTAATATCTGAAATGAAGGAGCATGAGCGGCGGGTGTGGTCCGTGGATTTCTCATTGGCAGACCCAACAATGCTAGCGAGTGGGAGCGATGATGGTTCTGTCAAGCTATGGAGTATCAATCAGGGAGTTAGTGTTGGTACCATCAAAACAAAGGCAAACGTGTGCTGTGTTCAGTTCCCCCTGGATTCTGGTCGATTCCTTGCATTTGGTTCAGCAGATCATCGAATATATTACTATGATCTCCGCAACCTAAAAATGCCACTTTGTACATTGGTTGGGCATAATAAGACTGTGAGCTACATCAAATTTGTAGACACCATGAACCTTGTCTCTTCGTCCACAGATAACACATTGAAGCTTTGGGATTTGTCAATGTGCGCATCTCGAGTTATAGACACACCAATTCAGTCATTCACAGGTCATATGAATGTGAAGAACTTTGTGGGATTGTCAGTATCTGATGGTTATATTGCTACCGGTTCAGAGACAAATGAGGTGTTCATATACCACAAGGCTTTTCCCATGCCGGCATTGTCATTCAAGTTTCAAATCACAGACCCACTTTCCGGGCAAGAAGTGGACGATGCCACGCAGTTCATCTCTTCAGTTTGCTGGCGTGGTCAGTCGTCGACCTTACTTGCCGCAAATTCCACAGGGAATGTCAAAATTCTGGAGATGGTTTAA 2637 0.4198 MEGSSGSGWQKSDSSRALNTSGVSDRNPRLLCPERNTISGEASHDSGFRKERDRSLLAQEVCKDVAVDPFVHSLEWGDISLRQWLDRPERSVDVFECLHIFRQIVEIVNIAHSQGIVVHNVRPSCFVMSSFNHVSFIESASCSDSGSDSVEDGLNSQAAVIKTQPSPGPRGILQNRSLASEDIVPVRTSTTALSESSCMLSSAVYAARASLIEETEENKAKDRRKGEEVEGKNQSFPMKQILLMETSWYTSPEEVADASSLCASDIYRLGVLLFELFCPLSSREEKSRTMSSLRHRVLPPQLLRKWPKEASFCLWLLHPEPSSRPTLGELLQSEFLNQQRDDMEEREAALELRERIEEQELLLEFLLLVQQRKQELSEKLQHTVSFLCSDIEEVTKKQERFKEVAGSELGSNNRLTPSFPSMTVVDSEDSACLGTRKRVRPRLHADNIEECDDNIGDDQKNYGSILSKSSRLTKNFKKLESAYFLTRCRQAYPSGKPAVRHSPLATDGRGSVAVTERSCINNLTSKEQCRDSRSAWINPFLEGLCKYLSFSKLKVKADLKQGDLLHSSNLVCSLSFDRDGEFFATAGVNKKIKVFECDTIINEDRDIHYPVVEMASRSKLSSICWNTYIKSQIASSNFEGVVQLWDVTRSQVISEMKEHERRVWSVDFSLADPTMLASGSDDGSVKLWSINQGVSVGTIKTKANVCCVQFPLDSGRFLAFGSADHRIYYYDLRNLKMPLCTLVGHNKTVSYIKFVDTMNLVSSSTDNTLKLWDLSMCASRVIDTPIQSFTGHMNVKNFVGLSVSDGYIATGSETNEVFIYHKAFPMPALSFKFQITDPLSGQEVDDATQFISSVCWRGQSSTLLAANSTGNVKILEMV 878
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Sto7g0251 878 ProSiteProfiles Trp-Asp (WD) repeats circular profile. 742 775 - -
Sto7g0251 878 PRINTS G protein beta WD-40 repeat signature 633 647 IPR020472 -
Sto7g0251 878 PRINTS G protein beta WD-40 repeat signature 676 690 IPR020472 -
Sto7g0251 878 PRINTS G protein beta WD-40 repeat signature 760 774 IPR020472 -
Sto7g0251 878 PANTHER PROTEIN SPA1-RELATED 2 1 878 IPR044630 GO:0009640
Sto7g0251 878 Gene3D Transferase(Phosphotransferase) domain 1 78 348 - -
Sto7g0251 878 SUPERFAMILY WD40 repeat-like 566 875 IPR036322 GO:0005515
Sto7g0251 878 Coils Coil 333 360 - -
Sto7g0251 878 ProSitePatterns Trp-Asp (WD) repeats signature. 760 774 IPR019775 -
Sto7g0251 878 ProSiteProfiles Trp-Asp (WD) repeats circular profile. 656 693 - -
Sto7g0251 878 SMART serkin_6 30 336 IPR000719 GO:0004672|GO:0005524|GO:0006468
Sto7g0251 878 Pfam WD domain, G-beta repeat 566 595 IPR001680 GO:0005515
Sto7g0251 878 Pfam WD domain, G-beta repeat 738 773 IPR001680 GO:0005515
Sto7g0251 878 Pfam WD domain, G-beta repeat 653 689 IPR001680 GO:0005515
Sto7g0251 878 ProSiteProfiles Trp-Asp (WD) repeats profile. 742 775 IPR001680 GO:0005515
Sto7g0251 878 SMART WD40_4 735 773 IPR001680 GO:0005515
Sto7g0251 878 SMART WD40_4 649 689 IPR001680 GO:0005515
Sto7g0251 878 SMART WD40_4 692 731 IPR001680 GO:0005515
Sto7g0251 878 SMART WD40_4 837 876 IPR001680 GO:0005515
Sto7g0251 878 SMART WD40_4 607 646 IPR001680 GO:0005515
Sto7g0251 878 SMART WD40_4 782 821 IPR001680 GO:0005515
Sto7g0251 878 SMART WD40_4 561 596 IPR001680 GO:0005515
Sto7g0251 878 MobiDBLite consensus disorder prediction 1 46 - -
Sto7g0251 878 Coils Coil 212 232 - -
Sto7g0251 878 MobiDBLite consensus disorder prediction 1 26 - -
Sto7g0251 878 ProSiteProfiles Protein kinase domain profile. 1 336 IPR000719 GO:0004672|GO:0005524|GO:0006468
Sto7g0251 878 SUPERFAMILY Protein kinase-like (PK-like) 71 345 IPR011009 -
Sto7g0251 878 PANTHER PROTEIN SPA1-RELATED 3 1 878 - -
Sto7g0251 878 ProSiteProfiles Trp-Asp (WD) repeats profile. 656 698 IPR001680 GO:0005515
Sto7g0251 878 Gene3D - 542 878 IPR015943 GO:0005515
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Sto7g0251 Sto-Chr7 1787289 1794597 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Sto7g0251 646 820 Miscellaneous Gene Families AT5G08390 23.729 2.30e-06 49.7
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Sto7g0251 - - gmx:100811457 1431.77
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Sto7g0251 7 1787289 1794597 Sto7g0251 7 1787289 1794597 ECH