Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Sto7g0246 ATGGCGAGCATTAGCTTGGGAACATCTGGGTGCTTAAGAAGAGCAGCTCAAGCTTTTGCACACTCTACTTTTCTCGGCAGCAATGCGAAACTCTCTTTTCAAAGGACCTTTTCTTCTCATCCTCTCGCCGTTTCTAATTCTTCAGCTTCATGTGTAAGTCAGAAGGTACAAGCTTTAAAGGGAGAAGTTGATGTCTTACTCAAGGGAGTAGGAGAAAAAAGCACAATAAAAGAAGTGAAGCATATTCTAGAGATGGCTCAACGGGCATCATCAAGACGAGAAGTTCTTCATACTGATTTTCTAACCCCTCCAGTGGTGAAGGAATCTATGCAACTAATGGAAAAGTTAGCAGGGGTGAAAGCAATTGCTCAAGGAGGTTACCCACAGGCTGAACGCTGCCGGATTTCTGTTGGACATCCTGAAGAACTGACCAGTGATCCAGATATAATTGCAGCATTAAGCATTACAGGGAACTTTCAGTTTGAATCTTGCTCTCATGGTGACTTCCTTGGTGCAATTCTTGGCACAGGAATTGTCAGGGAGAAACTTGGAGACATTATATTGCAgGGAGAACAGGGTGCTCAGGTACTTCTTGTGCCAGAACTTGTTGACTTTGTTATGTCATCACTGGGTAAGGTTGGTAATGTTCCTGTTACTTGCTCCAAGATTCCATTAATTTCTCTTGATTATGAACCGCCAAGAACAACATCATTTAAAACCATAGAAGCATCACTAAGAGTTGATGCACTAGCTAGTGCTGGGTTTAAGATTTCACGTTCGAAGTTGGTTGACTTGATCAGCAATGGGGATGTTCGCGTAAATTGGGTCCCCGTTACTACCAAAGGAGCCACACTCAAGAGTGGAGATATGGTTTCAGTTAGTGGAAAGGGAAGATTAAAGATAGGAGAAATAAACTCAACAAAGAAGGGAAAGTTTGCAGTGGAGCTCATTCGCATTGACTGGTGGTATAAGTATAACAAGGTTTGA 987 0.4245 MASISLGTSGCLRRAAQAFAHSTFLGSNAKLSFQRTFSSHPLAVSNSSASCVSQKVQALKGEVDVLLKGVGEKSTIKEVKHILEMAQRASSRREVLHTDFLTPPVVKESMQLMEKLAGVKAIAQGGYPQAERCRISVGHPEELTSDPDIIAALSITGNFQFESCSHGDFLGAILGTGIVREKLGDIILQGEQGAQVLLVPELVDFVMSSLGKVGNVPVTCSKIPLISLDYEPPRTTSFKTIEASLRVDALASAGFKISRSKLVDLISNGDVRVNWVPVTTKGATLKSGDMVSVSGKGRLKIGEINSTKKGKFAVELIRIDWWYKYNKV 328
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Sto7g0246 328 CDD S4 246 300 - -
Sto7g0246 328 TIGRFAM PS_II_S4: photosystem II S4 domain protein 75 318 IPR017506 -
Sto7g0246 328 Pfam Putative RNA-binding domain in YlmH 151 225 IPR040591 -
Sto7g0246 328 SMART s4_6 245 305 IPR002942 GO:0003723
Sto7g0246 328 Gene3D - 72 138 - -
Sto7g0246 328 Gene3D - 146 228 IPR012677 -
Sto7g0246 328 ProSiteProfiles S4 RNA-binding domain profile. 245 305 - -
Sto7g0246 328 PANTHER RNA-BINDING PROTEIN YLMH-RELATED 54 319 - -
Sto7g0246 328 Gene3D - 239 296 IPR036986 GO:0003723
Sto7g0246 328 SUPERFAMILY Alpha-L RNA-binding motif 103 309 - -
Sto7g0246 328 PANTHER RNA-BINDING PROTEIN YLMH-RELATED 54 319 - -
Sto7g0246 328 Pfam S4 domain 249 291 IPR002942 GO:0003723
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Sto7g0246 - - gmx:100793767 516.924
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Sto7g0246 7 1752207 1757224 Sto7g0246 7 1752207 1757224 ECH