Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Sto7g0238 ATGGCGACTGCGGAAATCAAGATGATCGGAGTGGTGGGCGGTGGCCAAATGGGTTCCGGAATTGCTCAGGTCGCCGCCATGCACGGCATCAACGTTTGGCTTCTCGACACCGATCCACAAGCTCTTGCAAAAGCCACTGCCTCAATTTCTGCCTCCATCAACCTTCTCGTTTCCAAAGCTCGTCTCTCCCAAGAACAAGGTACTGATGTCTTGGGACGTCTGCGCTGCACCTCAAATATGGAGGAGCTCCATTCTGCTGATCTTATCATTGAAGCTATAGTAGAATCAGAAGATATAAAGAAAACTTTATTTGTTCAACTAGACAAGATTGCTAAGAGGTCAGCCATTTTGGCATCTAATACAAGTTCCATCTCCATCACTCGTCTAGCATCCTCAACCAGCAGACCACATCAGGTGATAGGAATGCATTTTATGAATCCTCCTCCTGTAATGAAACTGATTGAGATTGTGAGAGGTGCAGACACTTCAGATGAGACATTTAAGGCTACAAAAGCTTTGTCCGAGAGGTTGGGTAAGACAGTAATAACCTCTCAGGATTATTCAGGCTTCATTGTAAATAGGGTCCTTATGCCTATGATAAATGAAGCATTCTTTGCTCTTTACACTGGTGTTGCCACTAAAGAGGATATTGACACAGGAATGAAGCTGGGAACTAACCATCCAATGGGTCCTTTGGAGCTTGCAGACTTCATTGGATTAGATGTTTGCTTGTCAATAATGAAAGTTCTTCATGTTGGCCTTGGCGACAATAAATATGCACCCTGCCCTTTACTAGTGCAGTATGTTGATGCCGGCCGACTTGGAAGAAAACGAGGTATTGGAGTTTATGACTATACAAAAGAGTCACGATCCAAAAAACCATCTTCTCGTCTCTAA 897 0.4415 MATAEIKMIGVVGGGQMGSGIAQVAAMHGINVWLLDTDPQALAKATASISASINLLVSKARLSQEQGTDVLGRLRCTSNMEELHSADLIIEAIVESEDIKKTLFVQLDKIAKRSAILASNTSSISITRLASSTSRPHQVIGMHFMNPPPVMKLIEIVRGADTSDETFKATKALSERLGKTVITSQDYSGFIVNRVLMPMINEAFFALYTGVATKEDIDTGMKLGTNHPMGPLELADFIGLDVCLSIMKVLHVGLGDNKYAPCPLLVQYVDAGRLGRKRGIGVYDYTKESRSKKPSSRL 298
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Sto7g0238 298 PANTHER 3-HYDROXYACYL-COA DEHYDROGENASE FAMILY PROTEIN 4 291 - -
Sto7g0238 298 SUPERFAMILY 6-phosphogluconate dehydrogenase C-terminal domain-like 189 294 IPR008927 -
Sto7g0238 298 PIRSF HCDH 1 298 IPR022694 GO:0006631|GO:0016616|GO:0070403
Sto7g0238 298 Gene3D - 192 297 IPR013328 GO:0016491
Sto7g0238 298 PANTHER 3-HYDROXYACYL-COA DEHYDROGENASE FAMILY PROTEIN 4 291 - -
Sto7g0238 298 Gene3D - 4 191 - -
Sto7g0238 298 Pfam 3-hydroxyacyl-CoA dehydrogenase, NAD binding domain 9 186 IPR006176 GO:0006631|GO:0070403
Sto7g0238 298 SUPERFAMILY NAD(P)-binding Rossmann-fold domains 5 187 IPR036291 -
Sto7g0238 298 ProSitePatterns 3-hydroxyacyl-CoA dehydrogenase signature. 186 211 IPR006180 GO:0006631|GO:0016491|GO:0016616
Sto7g0238 298 Pfam 3-hydroxyacyl-CoA dehydrogenase, C-terminal domain 189 285 IPR006108 GO:0006631|GO:0016491|GO:0016616
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Sto7g0238 64 294 Acyl Lipid Metabolism Gene Families AT3G15290 78.355 2.42e-137 386
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Sto7g0238 K00074 - gmx:100170753 475.707
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Sto7g0238 7 1690906 1693966 Sto7g0238 7 1690906 1693966 ECH