Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Sto7g0228 ATGCCGTACAAGATCCGGCCAGTAATAGCACTTTCCCTGCAAAACAACCAACTCATATTCAAATCTCCATTCAACGTCCACCCCGTAAATCGCCACTTTCTTCATTCCATTTCCAAATTCTCACTTCCACTCCTGCAAAAATCTAGCTATTTCCCAATCCCCCAGGACCTAAATTCTGAAACTTTGGCCACAATCCGACTATCCCACCTTCATTTTCTGAGATTCATTGAAACAACTCGACTCGTGCATTCCATTGCACACTCTGGAGACATATGTCATACATCAGCTGCTTTCGCTCAAAGCCTCCTCAAATTCCGAAGGGAAAAATCGACTGAGGAGATTGAGCGAGCTCTTGATCTCTCTGGGTTTGAGCTTAACCATGATTTTGTTTTGGATGTGCTTCGGAGGCATCGTTCTGATTGGAGACCAGCATATGTGTTCTTCAACTGGGTTTCCAAAGCAGGTCTCAGAGGAAGTGGGTATTCTCCTAGTTCTGATGTGTACAACGAGATTCTTAACATTCTTGGGAAGACCCAGCGTTTTGAGGAACTAAACAAGGTGTTCGATGAAATGTCTAAGAGAAAGGGACTGGTAAATGAAGGGACCTTTGGAACTTTGATTAATAGGTATGCTGCTGCACATAAGGTGGATGAAGCAATTGATGTTTTCTACAAGAGGAAAGAGTTTGGATTGGAGCTTGATTTGTCAGCTTTTCAGACGCTTTTGATGTGGCTGTGTAGGTATAAGCATGTGGAAGATGCAGAGACTCTGTTTCGCAGTAAGGTGAATGAGTTTCCTCCCGATATAAAGGCATGGAATATTATTCTGAATGGTTGGTGTGTTCTAGGGAATGTTTATGAAGCAAAGAGGTTTTGGAAAGACATAGTGGCATCCAAATGCAAGCCAGATCTTTTCACGTATGGGATTTTCATCAAGGCTTTAACaaagaaggggaagttgggaACGGCTTTGAAGTTGTTCAGAGGCATGTGGGATGAAGGTATGGTCAAACCAGATGTTGTGATATGCAATTGCATCATTGATGCACTTTGTTTCAAGAAGAGGATTCCTGAAGCTATGGAAATCTTTCACGACATGAAGAAACAAGGTTGTCTCCCACTCCCCAATGTGGTAACCTATAATTGCCTCATTAAGTACCTTTGTAAAATAGGACGTTTAGAACTAGTTGAAGAACTACTAAACGAAATGGAGCAAAAGAAAGGGAGTTGTCTGCCAAATGCTGTAACTTTCAGTTACTTGCTCAAGAGGTTGAAGGAACCAAAGGAAGTTCCAAGGCTTTTGGAGAGGATGGAGAGGAATGGATGCAGCATGGATGATGACATGTACAACCTGGTGTTAAGGTTGTACATGCAATGGGATTTTGAAGATGGAATCAGAAAAACATGGGAAGAAATGGAAAGACATGGATGGGGACCAGACCAGAGATCATATACAATCATGATTCATGGTCTGTATGAAAAAGGGAGAACAAAGGATGCTCTGCGTTATTTCAGGGAGATGACACTGAAGGGAATGGTGCCAGAGTCGATAACAGAGAAATTAATGACTTCCATGAACATTCGGATGAAGGAGAGAACAGGAAAACAAGGACGACATGGAAATTTGGGTGAAGTTGAAGGGACCTCCTAG 1650 0.4182 MPYKIRPVIALSLQNNQLIFKSPFNVHPVNRHFLHSISKFSLPLLQKSSYFPIPQDLNSETLATIRLSHLHFLRFIETTRLVHSIAHSGDICHTSAAFAQSLLKFRREKSTEEIERALDLSGFELNHDFVLDVLRRHRSDWRPAYVFFNWVSKAGLRGSGYSPSSDVYNEILNILGKTQRFEELNKVFDEMSKRKGLVNEGTFGTLINRYAAAHKVDEAIDVFYKRKEFGLELDLSAFQTLLMWLCRYKHVEDAETLFRSKVNEFPPDIKAWNIILNGWCVLGNVYEAKRFWKDIVASKCKPDLFTYGIFIKALTKKGKLGTALKLFRGMWDEGMVKPDVVICNCIIDALCFKKRIPEAMEIFHDMKKQGCLPLPNVVTYNCLIKYLCKIGRLELVEELLNEMEQKKGSCLPNAVTFSYLLKRLKEPKEVPRLLERMERNGCSMDDDMYNLVLRLYMQWDFEDGIRKTWEEMERHGWGPDQRSYTIMIHGLYEKGRTKDALRYFREMTLKGMVPESITEKLMTSMNIRMKERTGKQGRHGNLGEVEGTS 549
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Sto7g0228 549 PANTHER RESPIRATORY COMPLEX I CHAPERONE (CIA84), PUTATIVE (AFU_ORTHOLOGUE AFUA_2G06020)-RELATED 78 537 - -
Sto7g0228 549 ProSiteProfiles Pentatricopeptide (PPR) repeat profile. 268 302 IPR002885 -
Sto7g0228 549 PANTHER PPR CONTAINING PLANT-LIKE PROTEIN 78 537 - -
Sto7g0228 549 MobiDBLite consensus disorder prediction 530 549 - -
Sto7g0228 549 ProSiteProfiles Pentatricopeptide (PPR) repeat profile. 339 373 IPR002885 -
Sto7g0228 549 TIGRFAM PPR: pentatricopeptide repeat domain 202 234 IPR002885 -
Sto7g0228 549 TIGRFAM PPR: pentatricopeptide repeat domain 378 413 IPR002885 -
Sto7g0228 549 TIGRFAM PPR: pentatricopeptide repeat domain 341 373 IPR002885 -
Sto7g0228 549 TIGRFAM PPR: pentatricopeptide repeat domain 271 303 IPR002885 -
Sto7g0228 549 TIGRFAM PPR: pentatricopeptide repeat domain 483 514 IPR002885 -
Sto7g0228 549 TIGRFAM PPR: pentatricopeptide repeat domain 305 339 IPR002885 -
Sto7g0228 549 TIGRFAM PPR: pentatricopeptide repeat domain 167 195 IPR002885 -
Sto7g0228 549 ProSiteProfiles Pentatricopeptide (PPR) repeat profile. 303 337 IPR002885 -
Sto7g0228 549 Gene3D Tetratricopeptide repeat domain 96 260 IPR011990 GO:0005515
Sto7g0228 549 Gene3D Tetratricopeptide repeat domain 331 407 IPR011990 GO:0005515
Sto7g0228 549 Gene3D Tetratricopeptide repeat domain 261 330 IPR011990 GO:0005515
Sto7g0228 549 Pfam PPR repeat family 267 315 IPR002885 -
Sto7g0228 549 Pfam PPR repeat family 338 373 IPR002885 -
Sto7g0228 549 Pfam PPR repeat family 375 424 IPR002885 -
Sto7g0228 549 Gene3D Tetratricopeptide repeat domain 412 545 IPR011990 GO:0005515
Sto7g0228 549 Pfam PPR repeat 167 194 IPR002885 -
Sto7g0228 549 Pfam PPR repeat 202 225 IPR002885 -
Sto7g0228 549 Pfam PPR repeat 479 508 IPR002885 -
Sto7g0228 549 ProSiteProfiles Pentatricopeptide (PPR) repeat profile. 376 406 IPR002885 -
Sto7g0228 549 ProSiteProfiles Pentatricopeptide (PPR) repeat profile. 480 514 IPR002885 -
Sto7g0228 549 ProSiteProfiles Pentatricopeptide (PPR) repeat profile. 199 233 IPR002885 -
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Sto7g0228 167 518 Glycosyltransferase AT1G05670 24.167 1.51e-27 115
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Sto7g0228 - - qsu:112022761 646.351
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Sto7g0228 7 1626704 1628353 Sto7g0228 7 1626704 1628353 ECH