LGRPv2

Gene search

Sequence information

Select	Gene	Cds	Cds_length	GC_content	Pep	Pep_length
	Sto7g0212	ATGGAACTCCGGACTAGTACTACTCTTTCCGATTCCTCCGCCGCCGACCACCTCACCTACCTCTCCGGCTTCGACAACCACTTCTCCTCCGAGGCCCTCGCCGGAGCTCTCCCGCCCGATCAAAACAGCCCTCTCCTCTGCCCCTACGGCCTCTACGCCGAGCAAATCTCCGGCACCTCCTTCACCTCGCCTCGCAAGCACAATCTTCGCAGTTGGCTTTATCGGGTCAAGCCTTCCGTGACCCACGAACCGTTTAAGCCTCGGGTCCCCTCGAATGGGAAACTCGTGAGTGAGTTCAATCAGTCTAATAGTTGTGCGACTCCGACTCAGCTCCGATGGAAACCCGTGGATATACCCGATTCGCCCACGGATTTTGTGGATGGCTTGTACACTATTTGTGGTGCTGGCAGCTCGTTCCTCCGCCATGGATACGCTATTCACATGTACACTGCCAACAAATCAATGGATAATTCTGCCTTTTGCAATGCTGATGGTGACTTCCTCATAGTTCCTCAGAAAGGAAGGCTCTTAATCACTACTGAATGTGGAAGATTAGGGGTTTCCCCGGGCGAAATAGCCGTATTACCTCAAGGGTTTCGTTTCGCTGTTAATCTGCCCGATGGTCCATCCCGTGGATACGTTGCTGAGATTTTTGGTACTCATTTTCAACTTCCTGACCTTGGACCTATAGGTGCTAATGGCCTTGCTTCGCCAAGGGATTTCCTCGTTCCTACGGCGTGGTTTGAAGACAAAATCTATCCTGGCTACACTATAGTACAAAAGTTTGGTGGTGAATTATTTGATGCAGTACAAGATTTCTCTCCATTCAATGTTGCTGCTTGGCATGGTAACTATGTTCCATACAAGTATGATCTAAGCAAATTCTGCCCTTACAATACTGTTCTGTTTGATCATAGTGACCCTTCAATAAACACTGTTTTGACTGCGCCAACCGATAAACCCGGGGTGGCACTCCTTGACTTTGTTATCTTCCCGCCTAGATGGCTGGTTGCCGAGCACACATTCCGGCCTCCATATTATCATCGCAATTGCATGAGTGAATTTATGGGCCTTATTCATGGTGGCTACGAGGCAAAAGCTGATGGATTTCTTCCTGGTGGAGCAAGTCTTCACAGCTGCATGACTCCCCATGGCCCTGATACTAAGTCATATGAGGCTACCATAGCTGGTGGGAACGATGTAGGACCACAGAAAATCACAGACACAATGGCATTTATGTTTGAATCGAGTTTAATTCCACGTATTTGTAGATGGGCTCTAGAATCACCAGTCTTGGATCATGATTACTACCAATGTTGGATTGGCTTGAAGTCTCATTTTACACTTGATCACTCAACAAGTCCAAAAACCGCAACCTTGCAGAATGGACATGGTGAGAAGTGA	1404	0.4829	MELRTSTTLSDSSAADHLTYLSGFDNHFSSEALAGALPPDQNSPLLCPYGLYAEQISGTSFTSPRKHNLRSWLYRVKPSVTHEPFKPRVPSNGKLVSEFNQSNSCATPTQLRWKPVDIPDSPTDFVDGLYTICGAGSSFLRHGYAIHMYTANKSMDNSAFCNADGDFLIVPQKGRLLITTECGRLGVSPGEIAVLPQGFRFAVNLPDGPSRGYVAEIFGTHFQLPDLGPIGANGLASPRDFLVPTAWFEDKIYPGYTIVQKFGGELFDAVQDFSPFNVAAWHGNYVPYKYDLSKFCPYNTVLFDHSDPSINTVLTAPTDKPGVALLDFVIFPPRWLVAEHTFRPPYYHRNCMSEFMGLIHGGYEAKADGFLPGGASLHSCMTPHGPDTKSYEATIAGGNDVGPQKITDTMAFMFESSLIPRICRWALESPVLDHDYYQCWIGLKSHFTLDHSTSPKTATLQNGHGEK	467

Annotation information

Select	Seq ID	Length	Analysis	Description	Start	End	IPR	GO
	Sto7g0212	467	PANTHER	HOMOGENTISATE 1,2-DIOXYGENASE	13	448	-	-
	Sto7g0212	467	TIGRFAM	hmgA: homogentisate 1,2-dioxygenase	18	447	IPR005708	GO:0004411\|GO:0006559\|GO:0006570
	Sto7g0212	467	CDD	cupin_HGO_N	111	219	-	-
	Sto7g0212	467	Gene3D	Jelly Rolls	281	418	IPR014710	-
	Sto7g0212	467	Pfam	Homogentisate 1,2-dioxygenase C-terminal	293	447	IPR046451	-
	Sto7g0212	467	SUPERFAMILY	RmlC-like cupins	18	448	IPR011051	-
	Sto7g0212	467	Pfam	Homogentisate 1,2-dioxygenase N-terminal	19	292	IPR046452	-
	Sto7g0212	467	PANTHER	HOMOGENTISATE 1,2-DIOXYGENASE	13	448	IPR005708	GO:0004411\|GO:0006559\|GO:0006570

Pathway information

Select	Query	KO	Definition	Second KO	KEGG Genes ID	GHOSTX Score
	Sto7g0212	K00451		-	gmx:100801346	842.032

Event-related genes

Select	Gene_1	Chr_1	Start_1	End_1	Gene_2	Chr_2	Start_2	End_2	Event_name
	Sto7g0212	7	1523930	1526838	Sto7g0212	7	1523930	1526838	ECH